RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 FNBP4Q8N3X1 1017 aaPredicted RBP20.55■□□□□ 0.88
EWSR1-207ENST00000406548 JADE2Q9NQC1 790 aa20.55■□□□□ 0.88
EWSR1-207ENST00000406548 BLOC1S4Q9NUP1 217 aa20.55■□□□□ 0.88
EWSR1-207ENST00000406548 BIN2Q9UBW5 565 aaPredicted RBP20.55■□□□□ 0.88
EWSR1-207ENST00000406548 STK17AQ9UEE5 414 aa20.55■□□□□ 0.88
EWSR1-207ENST00000406548 PLAGL2Q9UPG8 496 aa20.55■□□□□ 0.88
EWSR1-207ENST00000406548 PDE2AO00408 941 aaPredicted RBP20.54■□□□□ 0.88
EWSR1-207ENST00000406548 PHACTR2O75167 634 aa20.54■□□□□ 0.88
EWSR1-207ENST00000406548 PLEKP08567 350 aaPredicted RBP20.54■□□□□ 0.88
EWSR1-207ENST00000406548 TXKP42681 527 aa20.54■□□□□ 0.88
EWSR1-207ENST00000406548 NFIXQ14938 502 aa20.54■□□□□ 0.88
EWSR1-207ENST00000406548 VWA3BQ502W6 1294 aa20.54■□□□□ 0.88
EWSR1-207ENST00000406548 IQCEQ6IPM2 695 aa20.54■□□□□ 0.88
EWSR1-207ENST00000406548 UNC13DQ70J99 1090 aa20.54■□□□□ 0.88
EWSR1-207ENST00000406548 VAT1LQ9HCJ6 419 aa20.54■□□□□ 0.88
EWSR1-207ENST00000406548 HPCAL4Q9UM19 191 aa20.54■□□□□ 0.88
EWSR1-207ENST00000406548 SIK3Q9Y2K2 1263 aa20.54■□□□□ 0.88
EWSR1-207ENST00000406548 CCDC96Q2M329 555 aa20.54■□□□□ 0.88
EWSR1-207ENST00000406548 KRT26Q7Z3Y9 468 aa20.54■□□□□ 0.88
EWSR1-207ENST00000406548 TEX11Q8IYF3 940 aa20.54■□□□□ 0.88
EWSR1-207ENST00000406548 TRIM58Q8NG06 486 aa20.54■□□□□ 0.88
EWSR1-207ENST00000406548 CEP95Q96GE4 821 aa20.54■□□□□ 0.88
EWSR1-207ENST00000406548 TRERF1Q96PN7 1200 aa20.54■□□□□ 0.88
EWSR1-207ENST00000406548 MTMR9Q96QG7 549 aa20.54■□□□□ 0.88
EWSR1-207ENST00000406548 TMEM260Q9NX78 707 aa20.54■□□□□ 0.88
EWSR1-207ENST00000406548 PVALEFA0A1B0GWK0 134 aa20.53■□□□□ 0.88
EWSR1-207ENST00000406548 USO1O60763 962 aaKnown RBP20.53■□□□□ 0.88
EWSR1-207ENST00000406548 CALCRLQ16602 461 aa20.53■□□□□ 0.88
EWSR1-207ENST00000406548 PTF1AQ7RTS3 328 aa20.53■□□□□ 0.88
EWSR1-207ENST00000406548 LARP4BQ92615 738 aaKnown RBP20.53■□□□□ 0.88
EWSR1-207ENST00000406548 GPR101Q96P66 508 aaPredicted RBP20.53■□□□□ 0.88
EWSR1-207ENST00000406548 PNMA5Q96PV4 448 aa20.53■□□□□ 0.88
EWSR1-207ENST00000406548 NDST4Q9H3R1 872 aa20.53■□□□□ 0.88
EWSR1-207ENST00000406548 ABCB11O95342 1321 aa20.53■□□□□ 0.88
EWSR1-207ENST00000406548 MYMKA6NI61 221 aa20.53■□□□□ 0.88
EWSR1-207ENST00000406548 FXR2P51116 673 aaKnown RBP eCLIP20.53■□□□□ 0.882e-9■■□□□ 11.4
EWSR1-207ENST00000406548 MAN2A1Q16706 1144 aa20.53■□□□□ 0.88
EWSR1-207ENST00000406548 FAM98CQ17RN3 349 aaKnown RBP20.53■□□□□ 0.88
EWSR1-207ENST00000406548 C2CD5Q86YS7 1000 aa20.53■□□□□ 0.88
EWSR1-207ENST00000406548 COG1Q8WTW3 980 aa20.53■□□□□ 0.88
EWSR1-207ENST00000406548 IFIH1Q9BYX4 1025 aaKnown RBP20.53■□□□□ 0.88
EWSR1-207ENST00000406548 SH2D4AQ9H788 454 aa20.53■□□□□ 0.88
EWSR1-207ENST00000406548 FAM204AQ9H8W3 233 aa20.53■□□□□ 0.88
EWSR1-207ENST00000406548 ARHGAP20Q9P2F6 1191 aa20.53■□□□□ 0.88
EWSR1-207ENST00000406548 JRKLQ9Y4A0 524 aa20.53■□□□□ 0.88
EWSR1-207ENST00000406548 GPR75-ASB3A0A0A6YYF3 556 aa20.52■□□□□ 0.88
EWSR1-207ENST00000406548 hCG_1984214I3L0E3 225 aa20.52■□□□□ 0.88
EWSR1-207ENST00000406548 EPHB6O15197 1021 aa20.52■□□□□ 0.88
EWSR1-207ENST00000406548 RNF40O75150 1001 aa20.52■□□□□ 0.88
EWSR1-207ENST00000406548 TACC1O75410 805 aa20.52■□□□□ 0.88
EWSR1-207ENST00000406548 RPS6KA5O75582 802 aa20.52■□□□□ 0.88
EWSR1-207ENST00000406548 SYF2O95926 243 aaKnown RBP20.52■□□□□ 0.88
EWSR1-207ENST00000406548 KIF11P52732 1056 aa20.52■□□□□ 0.88
EWSR1-207ENST00000406548 C2orf54Q08AI8 447 aa20.52■□□□□ 0.88
EWSR1-207ENST00000406548 TMEM266Q2M3C6 531 aa20.52■□□□□ 0.88
EWSR1-207ENST00000406548 C15orf52Q6ZUT6 534 aaKnown RBP20.52■□□□□ 0.88
EWSR1-207ENST00000406548 ZNF713Q8N859 430 aaPredicted RBP20.52■□□□□ 0.88
EWSR1-207ENST00000406548 CDK5RAP3Q96JB5 506 aa20.52■□□□□ 0.88
EWSR1-207ENST00000406548 FAM207AQ9NSI2 230 aaPredicted RBP20.52■□□□□ 0.88
EWSR1-207ENST00000406548 SNX12Q9UMY4 172 aa20.52■□□□□ 0.88
EWSR1-207ENST00000406548 RTCBQ9Y3I0 505 aaKnown RBP20.52■□□□□ 0.88
EWSR1-207ENST00000406548 PCDHA13Q9Y5I0 950 aa20.52■□□□□ 0.88
EWSR1-207ENST00000406548 CAPN6Q9Y6Q1 641 aa20.52■□□□□ 0.88
EWSR1-207ENST00000406548 NHSQ6T4R5 1651 aa20.52■□□□□ 0.88
EWSR1-207ENST00000406548 SPATA31A6Q5VVP1 1343 aa20.52■□□□□ 0.88
EWSR1-207ENST00000406548 FGFR1OPO95684 399 aaKnown RBP20.51■□□□□ 0.87
EWSR1-207ENST00000406548 IVLP07476 585 aa20.51■□□□□ 0.87
EWSR1-207ENST00000406548 GUF1Q8N442 669 aaKnown RBP20.51■□□□□ 0.87
EWSR1-207ENST00000406548 SMCR8Q8TEV9 937 aaPredicted RBP20.51■□□□□ 0.87
EWSR1-207ENST00000406548 RIOX1Q9H6W3 641 aa20.51■□□□□ 0.87
EWSR1-207ENST00000406548 ZC3H4Q9UPT8 1303 aaKnown RBP20.51■□□□□ 0.87
EWSR1-207ENST00000406548 BTAF1O14981 1849 aa20.51■□□□□ 0.87
EWSR1-207ENST00000406548 USP17L5A8MUK1 530 aa20.51■□□□□ 0.87
EWSR1-207ENST00000406548 ZMYND10O75800 440 aa20.51■□□□□ 0.87
EWSR1-207ENST00000406548 LCA5LO95447 670 aa20.51■□□□□ 0.87
EWSR1-207ENST00000406548 NOVP48745 357 aa20.51■□□□□ 0.87
EWSR1-207ENST00000406548 AMIGO3Q86WK7 504 aa20.51■□□□□ 0.87
EWSR1-207ENST00000406548 ARHGEF1Q92888 912 aaKnown RBP20.51■□□□□ 0.87
EWSR1-207ENST00000406548 UBA5Q9GZZ9 404 aa20.51■□□□□ 0.87
EWSR1-207ENST00000406548 SLC37A4O43826 429 aa20.5■□□□□ 0.87
EWSR1-207ENST00000406548 PLCG2P16885 1265 aa20.5■□□□□ 0.87
EWSR1-207ENST00000406548 LRRC63Q05C16 580 aa20.5■□□□□ 0.87
EWSR1-207ENST00000406548 DYMQ7RTS9 669 aa20.5■□□□□ 0.87
EWSR1-207ENST00000406548 CCDC84Q86UT8 332 aaPredicted RBP20.5■□□□□ 0.87
EWSR1-207ENST00000406548 CREG2Q8IUH2 290 aa20.5■□□□□ 0.87
EWSR1-207ENST00000406548 GSPT2Q8IYD1 628 aaKnown RBP20.5■□□□□ 0.87
EWSR1-207ENST00000406548 TSPYL1Q9H0U9 437 aa20.5■□□□□ 0.87
EWSR1-207ENST00000406548 DEF6Q9H4E7 631 aa20.5■□□□□ 0.87
EWSR1-207ENST00000406548 MYBL2P10244 700 aa20.5■□□□□ 0.87
EWSR1-207ENST00000406548 EIF4A3P38919 411 aaKnown RBP20.5■□□□□ 0.87
EWSR1-207ENST00000406548 CCDC70Q6NSX1 233 aa20.5■□□□□ 0.87
EWSR1-207ENST00000406548 CCNI2Q6ZMN8 369 aaPredicted RBP20.5■□□□□ 0.87
EWSR1-207ENST00000406548 RAD54LQ92698 747 aa20.5■□□□□ 0.87
EWSR1-207ENST00000406548 SELENOOQ9BVL4 669 aa20.5■□□□□ 0.87
EWSR1-207ENST00000406548 RAB34Q9BZG1 259 aa20.5■□□□□ 0.87
EWSR1-207ENST00000406548 MMRN2Q9H8L6 949 aa20.5■□□□□ 0.87
EWSR1-207ENST00000406548 MLXIPQ9HAP2 919 aa20.5■□□□□ 0.87
EWSR1-207ENST00000406548 PRPF6O94906 941 aaKnown RBP20.49■□□□□ 0.87
EWSR1-207ENST00000406548 TDP2O95551 362 aa20.49■□□□□ 0.87
EWSR1-207ENST00000406548 ADCY7P51828 1080 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms