RNA–Protein interactions for RNA: ENST00000406477.7

PARVB-204, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-204ENST00000406477 DEFB129Q9H1M3 183 aa18.21■□□□□ 0.51
PARVB-204ENST00000406477 SPON1Q9HCB6 807 aa18.21■□□□□ 0.51
PARVB-204ENST00000406477 CYP3A4P08684 503 aa18.2■□□□□ 0.5
PARVB-204ENST00000406477 ATP1A3P13637 1013 aa18.2■□□□□ 0.5
PARVB-204ENST00000406477 SNAP25P60880 206 aa18.2■□□□□ 0.5
PARVB-204ENST00000406477 SPAG1Q07617 926 aa18.2■□□□□ 0.5
PARVB-204ENST00000406477 PAK1Q13153 545 aa18.2■□□□□ 0.5
PARVB-204ENST00000406477 NOLC1Q14978 699 aaKnown RBP eCLIP18.2■□□□□ 0.5
PARVB-204ENST00000406477 CCDC144BQ3MJ40 725 aa18.2■□□□□ 0.5
PARVB-204ENST00000406477 KIAA1755Q5JYT7 1200 aa18.2■□□□□ 0.5
PARVB-204ENST00000406477 TMC6Q7Z403 805 aa18.2■□□□□ 0.5
PARVB-204ENST00000406477 FILIP1Q7Z7B0 1213 aa18.2■□□□□ 0.5
PARVB-204ENST00000406477 SNX29Q8TEQ0 813 aa18.2■□□□□ 0.5
PARVB-204ENST00000406477 HAS1Q92839 578 aa18.2■□□□□ 0.5
PARVB-204ENST00000406477 KIFC2Q96AC6 838 aa18.2■□□□□ 0.5
PARVB-204ENST00000406477 FAM20AQ96MK3 541 aa18.2■□□□□ 0.5
PARVB-204ENST00000406477 KCNMB3Q9NPA1 279 aa18.2■□□□□ 0.5
PARVB-204ENST00000406477 PPP2R3BQ9Y5P8 575 aa18.2■□□□□ 0.5
PARVB-204ENST00000406477 GCOM1H8Y6P7 765 aaPredicted RBP18.19■□□□□ 0.5
PARVB-204ENST00000406477 POLR2MP0CAP2 368 aa18.19■□□□□ 0.5
PARVB-204ENST00000406477 CD44P16070 742 aaKnown RBP18.19■□□□□ 0.5
PARVB-204ENST00000406477 LMNB1P20700 586 aa18.19■□□□□ 0.5
PARVB-204ENST00000406477 USP14P54578 494 aa18.19■□□□□ 0.5
PARVB-204ENST00000406477 GRB10Q13322 594 aa18.19■□□□□ 0.5
PARVB-204ENST00000406477 KMT5BQ4FZB7 885 aa18.19■□□□□ 0.5
PARVB-204ENST00000406477 KLHL10Q6JEL2 608 aa18.19■□□□□ 0.5
PARVB-204ENST00000406477 ANKRD20A12PQ8NF67 263 aa18.19■□□□□ 0.5
PARVB-204ENST00000406477 NLGN2Q8NFZ4 835 aa18.19■□□□□ 0.5
PARVB-204ENST00000406477 PLIN2Q99541 437 aa18.19■□□□□ 0.5
PARVB-204ENST00000406477 TRIM9Q9C026 710 aa18.19■□□□□ 0.5
PARVB-204ENST00000406477 AS3MTQ9HBK9 375 aa18.19■□□□□ 0.5
PARVB-204ENST00000406477 SPTLC3Q9NUV7 552 aa18.19■□□□□ 0.5
PARVB-204ENST00000406477 EGFRP00533 1210 aa18.18■□□□□ 0.5
PARVB-204ENST00000406477 FDX1P10109 184 aa18.18■□□□□ 0.5
PARVB-204ENST00000406477 FILIP1LQ4L180 1135 aa18.18■□□□□ 0.5
PARVB-204ENST00000406477 TMEM119Q4V9L6 283 aa18.18■□□□□ 0.5
PARVB-204ENST00000406477 HYIQ5T013 277 aa18.18■□□□□ 0.5
PARVB-204ENST00000406477 TRMT44Q8IYL2 757 aaKnown RBP18.18■□□□□ 0.5
PARVB-204ENST00000406477 GPC2Q8N158 579 aa18.18■□□□□ 0.5
PARVB-204ENST00000406477 CACTINQ8WUQ7 758 aaKnown RBP18.18■□□□□ 0.5
PARVB-204ENST00000406477 LARP4BQ92615 738 aaKnown RBP18.18■□□□□ 0.5
PARVB-204ENST00000406477 EXOC1Q9NV70 894 aa18.18■□□□□ 0.5
PARVB-204ENST00000406477 CTNND2Q9UQB3 1225 aa18.18■□□□□ 0.5
PARVB-204ENST00000406477 RABGAP1Q9Y3P9 1069 aa18.18■□□□□ 0.5
PARVB-204ENST00000406477 ZNF541Q9H0D2 1346 aa18.18■□□□□ 0.5
PARVB-204ENST00000406477 MYH7BA7E2Y1 1941 aa18.18■□□□□ 0.5
PARVB-204ENST00000406477 PVALEFA0A1B0GWK0 134 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 KLRC4O43908 158 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 PRELPP51888 382 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 ASIC1P78348 528 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 ZYXQ15942 572 aaKnown RBP18.17■□□□□ 0.5
PARVB-204ENST00000406477 HAUS3Q68CZ6 603 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 CNNM4Q6P4Q7 775 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 CCDC174Q6PII3 467 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 ARHGAP27Q6ZUM4 889 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 VSTM4Q8IW00 320 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 SAMD3Q8N6K7 520 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 PRPF38AQ8NAV1 312 aaKnown RBP18.17■□□□□ 0.5
PARVB-204ENST00000406477 GIMAP8Q8ND71 665 aaPredicted RBP18.17■□□□□ 0.5
PARVB-204ENST00000406477 ERMNQ8TAM6 284 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 RAD54LQ92698 747 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 DHTKD1Q96HY7 919 aaPredicted RBP18.17■□□□□ 0.5
PARVB-204ENST00000406477 PNMA5Q96PV4 448 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 PSMA7O14818 248 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 ZNF76P36508 570 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 COBLL1Q53SF7 1204 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 CDKAL1Q5VV42 579 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 ADSSL1Q8N142 457 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 KCTD17Q8N5Z5 321 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 NOC3LQ8WTT2 800 aaKnown RBP18.17■□□□□ 0.5
PARVB-204ENST00000406477 NELFBQ8WX92 580 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 SLF1Q9BQI6 1058 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 WDR18Q9BV38 432 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 GPRC5DQ9NZD1 345 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 ZNF112Q9UJU3 913 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 PYCARDQ9ULZ3 195 aa18.17■□□□□ 0.5
PARVB-204ENST00000406477 POTEMA6NI47 508 aa18.16■□□□□ 0.5
PARVB-204ENST00000406477 OPLAHO14841 1288 aa18.16■□□□□ 0.5
PARVB-204ENST00000406477 SFPQP23246 707 aaKnown RBP eCLIP18.16■□□□□ 0.5
PARVB-204ENST00000406477 STX17P56962 302 aa18.16■□□□□ 0.5
PARVB-204ENST00000406477 SCYL3Q8IZE3 742 aa18.16■□□□□ 0.5
PARVB-204ENST00000406477 MED15Q96RN5 788 aa18.16■□□□□ 0.5
PARVB-204ENST00000406477 SAMSN1Q9NSI8 373 aaKnown RBP18.16■□□□□ 0.5
PARVB-204ENST00000406477 BMP2KQ9NSY1 1161 aaPredicted RBP18.16■□□□□ 0.5
PARVB-204ENST00000406477 BLOC1S4Q9NUP1 217 aa18.16■□□□□ 0.5
PARVB-204ENST00000406477 ATAD5Q96QE3 1844 aa18.15■□□□□ 0.5
PARVB-204ENST00000406477 BICDL2A1A5D9 508 aa18.15■□□□□ 0.5
PARVB-204ENST00000406477 ICAM1P05362 532 aa18.15■□□□□ 0.5
PARVB-204ENST00000406477 CCT6AP40227 531 aaKnown RBP18.15■□□□□ 0.5
PARVB-204ENST00000406477 PRCPP42785 496 aa18.15■□□□□ 0.5
PARVB-204ENST00000406477 PDE4DQ08499 809 aa18.15■□□□□ 0.5
PARVB-204ENST00000406477 PRR16Q569H4 304 aa18.15■□□□□ 0.5
PARVB-204ENST00000406477 UNC13DQ70J99 1090 aa18.15■□□□□ 0.5
PARVB-204ENST00000406477 LDHDQ86WU2 507 aa18.15■□□□□ 0.5
PARVB-204ENST00000406477 MCF2L2Q86YR7 1114 aa18.15■□□□□ 0.5
PARVB-204ENST00000406477 SMYD4Q8IYR2 804 aaPredicted RBP18.15■□□□□ 0.5
PARVB-204ENST00000406477 ETNPPLQ8TBG4 499 aa18.15■□□□□ 0.5
PARVB-204ENST00000406477 GLIS2Q9BZE0 524 aaPredicted RBP18.15■□□□□ 0.5
PARVB-204ENST00000406477 MAP3K20Q9NYL2 800 aaKnown RBP18.15■□□□□ 0.5
PARVB-204ENST00000406477 A0A1B0GTH6 734 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms