RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 HOXA13P31271 388 aaPredicted RBP25.06■■□□□ 1.6
EPCAM-202ENST00000405271 NCAPG2Q86XI2 1143 aa25.06■■□□□ 1.6
EPCAM-202ENST00000405271 ANKRD13CQ8N6S4 541 aa25.06■■□□□ 1.6
EPCAM-202ENST00000405271 USP28Q96RU2 1077 aa25.06■■□□□ 1.6
EPCAM-202ENST00000405271 ARHGAP39Q9C0H5 1083 aa25.06■■□□□ 1.6
EPCAM-202ENST00000405271 SCAND2PQ9GZW5 306 aaPredicted RBP25.06■■□□□ 1.6
EPCAM-202ENST00000405271 MROH8Q9H579 483 aa25.06■■□□□ 1.6
EPCAM-202ENST00000405271 DOCK3Q8IZD9 2030 aa25.05■■□□□ 1.6
EPCAM-202ENST00000405271 TOB1P50616 345 aaPredicted RBP25.05■■□□□ 1.6
EPCAM-202ENST00000405271 ARHGEF6Q15052 776 aa25.05■■□□□ 1.6
EPCAM-202ENST00000405271 INF2Q27J81 1249 aa25.05■■□□□ 1.6
EPCAM-202ENST00000405271 NSMFQ6X4W1 530 aa25.05■■□□□ 1.6
EPCAM-202ENST00000405271 NEK8Q86SG6 692 aa25.05■■□□□ 1.6
EPCAM-202ENST00000405271 TBCKQ8TEA7 893 aa25.05■■□□□ 1.6
EPCAM-202ENST00000405271 TBC1D5Q92609 795 aa25.05■■□□□ 1.6
EPCAM-202ENST00000405271 CNPY2Q9Y2B0 182 aa25.05■■□□□ 1.6
EPCAM-202ENST00000405271 MCM3APO60318 1980 aa25.04■■□□□ 1.6
EPCAM-202ENST00000405271 PEX10O60683 326 aa25.04■■□□□ 1.6
EPCAM-202ENST00000405271 BCRP11274 1271 aa25.04■■□□□ 1.6
EPCAM-202ENST00000405271 ERCC3P19447 782 aa25.04■■□□□ 1.6
EPCAM-202ENST00000405271 RPS6P62753 249 aaKnown RBP25.04■■□□□ 1.6
EPCAM-202ENST00000405271 CSPP1Q1MSJ5 1256 aa25.04■■□□□ 1.6
EPCAM-202ENST00000405271 Q3C1V9 767 aa25.04■■□□□ 1.6
EPCAM-202ENST00000405271 TTC38Q5R3I4 469 aa25.04■■□□□ 1.6
EPCAM-202ENST00000405271 ANO1Q5XXA6 986 aa25.04■■□□□ 1.6
EPCAM-202ENST00000405271 CHAMP1Q96JM3 812 aa25.04■■□□□ 1.6
EPCAM-202ENST00000405271 PGBD1Q96JS3 809 aa25.04■■□□□ 1.6
EPCAM-202ENST00000405271 RTEL1Q9NZ71 1219 aa25.04■■□□□ 1.6
EPCAM-202ENST00000405271 PTPN22Q9Y2R2 807 aa25.04■■□□□ 1.6
EPCAM-202ENST00000405271 GOLGA6L22H0YM25 854 aa25.03■■□□□ 1.6
EPCAM-202ENST00000405271 YEATS4O95619 227 aa25.03■■□□□ 1.6
EPCAM-202ENST00000405271 SREBF1P36956 1147 aa25.03■■□□□ 1.6
EPCAM-202ENST00000405271 NASPP49321 788 aaPredicted RBP25.03■■□□□ 1.6
EPCAM-202ENST00000405271 ORC2Q13416 577 aaPredicted RBP25.03■■□□□ 1.6
EPCAM-202ENST00000405271 KIF22Q14807 665 aa25.03■■□□□ 1.6
EPCAM-202ENST00000405271 SLC30A10Q6XR72 485 aa25.03■■□□□ 1.6
EPCAM-202ENST00000405271 NAP1L4Q99733 375 aaKnown RBP25.03■■□□□ 1.6
EPCAM-202ENST00000405271 A1CFQ9NQ94 594 aaKnown RBP25.03■■□□□ 1.6
EPCAM-202ENST00000405271 CEP131Q9UPN4 1083 aa25.03■■□□□ 1.6
EPCAM-202ENST00000405271 FIBPO43427 364 aa25.02■■□□□ 1.6
EPCAM-202ENST00000405271 BMP15O95972 392 aa25.02■■□□□ 1.6
EPCAM-202ENST00000405271 FCHSD1Q86WN1 690 aa25.02■■□□□ 1.6
EPCAM-202ENST00000405271 SYTL5Q8TDW5 730 aaPredicted RBP25.02■■□□□ 1.6
EPCAM-202ENST00000405271 CYP39A1Q9NYL5 469 aa25.02■■□□□ 1.6
EPCAM-202ENST00000405271 TFIP11Q9UBB9 837 aaKnown RBP25.02■■□□□ 1.6
EPCAM-202ENST00000405271 FRMPD4Q14CM0 1322 aa25.02■■□□□ 1.6
EPCAM-202ENST00000405271 CTGFP29279 349 aa25.02■■□□□ 1.6
EPCAM-202ENST00000405271 TMEM87AQ8NBN3 555 aa25.02■■□□□ 1.6
EPCAM-202ENST00000405271 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.02■■□□□ 1.6
EPCAM-202ENST00000405271 CLIC4Q9Y696 253 aa25.02■■□□□ 1.6
EPCAM-202ENST00000405271 RPTORQ8N122 1335 aa25.01■■□□□ 1.59
EPCAM-202ENST00000405271 ECM2O94769 699 aaPredicted RBP25.01■■□□□ 1.59
EPCAM-202ENST00000405271 BAATQ14032 418 aaPredicted RBP25.01■■□□□ 1.59
EPCAM-202ENST00000405271 SF3A1Q15459 793 aaKnown RBP25.01■■□□□ 1.59
EPCAM-202ENST00000405271 ANKRD35Q8N283 1001 aa25.01■■□□□ 1.59
EPCAM-202ENST00000405271 CRYGNQ8WXF5 182 aa25.01■■□□□ 1.59
EPCAM-202ENST00000405271 SPATA32Q96LK8 384 aa25.01■■□□□ 1.59
EPCAM-202ENST00000405271 FTOQ9C0B1 505 aaKnown RBP eCLIP25.01■■□□□ 1.594e-11■■□□□ 11.8
EPCAM-202ENST00000405271 COL20A1Q9P218 1284 aa25.01■■□□□ 1.59
EPCAM-202ENST00000405271 PCDHB6Q9Y5E3 794 aa25.01■■□□□ 1.59
EPCAM-202ENST00000405271 ELP1O95163 1332 aa25■■□□□ 1.59
EPCAM-202ENST00000405271 GCFC2P16383 781 aaKnown RBP25■■□□□ 1.59
EPCAM-202ENST00000405271 ATP2B1P20020 1258 aa25■■□□□ 1.59
EPCAM-202ENST00000405271 PSMC4P43686 418 aa25■■□□□ 1.59
EPCAM-202ENST00000405271 USP11P51784 963 aa25■■□□□ 1.59
EPCAM-202ENST00000405271 ARHGAP4P98171 946 aa25■■□□□ 1.59
EPCAM-202ENST00000405271 NBR1Q14596 966 aa25■■□□□ 1.59
EPCAM-202ENST00000405271 MOXD1Q6UVY6 613 aa25■■□□□ 1.59
EPCAM-202ENST00000405271 TRIM47Q96LD4 638 aa25■■□□□ 1.59
EPCAM-202ENST00000405271 MORC2Q9Y6X9 1032 aaPredicted RBP25■■□□□ 1.59
EPCAM-202ENST00000405271 GNRH1P01148 92 aa24.99■■□□□ 1.59
EPCAM-202ENST00000405271 CEBPZQ03701 1054 aaKnown RBP24.99■■□□□ 1.59
EPCAM-202ENST00000405271 STK38Q15208 465 aa24.99■■□□□ 1.59
EPCAM-202ENST00000405271 LETM2Q2VYF4 491 aa24.99■■□□□ 1.59
EPCAM-202ENST00000405271 LINC00301Q8NCQ3 95 aa24.99■■□□□ 1.59
EPCAM-202ENST00000405271 LEO1Q8WVC0 666 aaPredicted RBP24.99■■□□□ 1.59
EPCAM-202ENST00000405271 PORCNQ9H237 461 aa24.99■■□□□ 1.59
EPCAM-202ENST00000405271 RCOR1Q9UKL0 485 aa24.99■■□□□ 1.59
EPCAM-202ENST00000405271 ZSWIM8A7E2V4 1837 aa24.99■■□□□ 1.59
EPCAM-202ENST00000405271 DDX11L8A8MPP1 907 aa24.98■■□□□ 1.59
EPCAM-202ENST00000405271 CYP3A4P08684 503 aa24.98■■□□□ 1.59
EPCAM-202ENST00000405271 PTPAQ15257 358 aa24.98■■□□□ 1.59
EPCAM-202ENST00000405271 CCAR1Q8IX12 1150 aaKnown RBP24.98■■□□□ 1.59
EPCAM-202ENST00000405271 KCNG4Q8TDN1 519 aa24.98■■□□□ 1.59
EPCAM-202ENST00000405271 MMP19Q99542 508 aa24.98■■□□□ 1.59
EPCAM-202ENST00000405271 WNT7AO00755 349 aa24.97■■□□□ 1.59
EPCAM-202ENST00000405271 MAPK4P31152 587 aa24.97■■□□□ 1.59
EPCAM-202ENST00000405271 MCM4P33991 863 aa24.97■■□□□ 1.59
EPCAM-202ENST00000405271 KCTD2Q14681 263 aa24.97■■□□□ 1.59
EPCAM-202ENST00000405271 SLC39A14Q15043 492 aa24.97■■□□□ 1.59
EPCAM-202ENST00000405271 WDR78Q5VTH9 848 aa24.97■■□□□ 1.59
EPCAM-202ENST00000405271 PPP4R3AQ6IN85 833 aa24.97■■□□□ 1.59
EPCAM-202ENST00000405271 GDPD2Q9HCC8 539 aa24.97■■□□□ 1.59
EPCAM-202ENST00000405271 WDR81Q562E7 1941 aa24.97■■□□□ 1.59
EPCAM-202ENST00000405271 CCNT1O60563 726 aaKnown RBP24.96■■□□□ 1.59
EPCAM-202ENST00000405271 FCER1AP12319 257 aa24.96■■□□□ 1.59
EPCAM-202ENST00000405271 MCM7P33993 719 aa24.96■■□□□ 1.59
EPCAM-202ENST00000405271 ZNF174Q15697 407 aa24.96■■□□□ 1.59
EPCAM-202ENST00000405271 ABRAQ8N0Z2 381 aa24.96■■□□□ 1.59
EPCAM-202ENST00000405271 DNERQ8NFT8 737 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms