RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 GOLGA6L1Q8N7Z2 621 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 COG1Q8WTW3 980 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 LARP4BQ92615 738 aaKnown RBP11.95□□□□□ -0.5
CLIP4-204ENST00000404424 MTMR9Q96QG7 549 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 NDST4Q9H3R1 872 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 RIOX1Q9H6W3 641 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 JADE2Q9NQC1 790 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 LRWD1Q9UFC0 647 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 TFR2Q9UP52 801 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 BTDP43251 543 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 PSMD2Q13200 908 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 GRB10Q13322 594 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 CALCRLQ16602 461 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 USP17L2Q6R6M4 530 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 ARHGAP27Q6ZUM4 889 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 POTEDQ86YR6 584 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 CAPZA3Q96KX2 299 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 EDEM3Q9BZQ6 932 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 SLC39A2Q9NP94 309 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 SAP30BPQ9UHR5 308 aaKnown RBP11.94□□□□□ -0.5
CLIP4-204ENST00000404424 SIK3Q9Y2K2 1263 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 RTCBQ9Y3I0 505 aaKnown RBP11.94□□□□□ -0.5
CLIP4-204ENST00000404424 GNPATO15228 680 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 KCNQ4P56696 695 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 CYP27A1Q02318 531 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 CCDC96Q2M329 555 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 CCNI2Q6ZMN8 369 aaPredicted RBP11.94□□□□□ -0.5
CLIP4-204ENST00000404424 TEX11Q8IYF3 940 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 CCDC24Q8N4L8 307 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 MMGT1Q8N4V1 131 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 EEF2KMTQ96G04 330 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 CDK5RAP3Q96JB5 506 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 PIGSQ96S52 555 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 IFIH1Q9BYX4 1025 aaKnown RBP11.94□□□□□ -0.5
CLIP4-204ENST00000404424 SH2D4AQ9H788 454 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 RIC8AQ9NPQ8 531 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 BLOC1S4Q9NUP1 217 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 HPCAL4Q9UM19 191 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 SNX12Q9UMY4 172 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 PCDHA13Q9Y5I0 950 aa11.94□□□□□ -0.5
CLIP4-204ENST00000404424 MACROD2A1Z1Q3 448 aa11.93□□□□□ -0.5
CLIP4-204ENST00000404424 MYMKA6NI61 221 aa11.93□□□□□ -0.5
CLIP4-204ENST00000404424 ZNF263O14978 683 aa11.93□□□□□ -0.5
CLIP4-204ENST00000404424 TXKP42681 527 aa11.93□□□□□ -0.5
CLIP4-204ENST00000404424 TNNT3P45378 269 aaPredicted RBP11.93□□□□□ -0.5
CLIP4-204ENST00000404424 GRIK5Q16478 980 aa11.93□□□□□ -0.5
CLIP4-204ENST00000404424 SLF2Q8IX21 1173 aa11.93□□□□□ -0.5
CLIP4-204ENST00000404424 FAM163AQ96GL9 167 aaPredicted RBP11.93□□□□□ -0.5
CLIP4-204ENST00000404424 ALS2CR12Q96Q35 445 aa11.93□□□□□ -0.5
CLIP4-204ENST00000404424 ARHGAP20Q9P2F6 1191 aa11.93□□□□□ -0.5
CLIP4-204ENST00000404424 BIN2Q9UBW5 565 aaPredicted RBP11.93□□□□□ -0.5
CLIP4-204ENST00000404424 DUSP10Q9Y6W6 482 aa11.93□□□□□ -0.5
CLIP4-204ENST00000404424 SBF2Q86WG5 1849 aa11.93□□□□□ -0.5
CLIP4-204ENST00000404424 RNF40O75150 1001 aa11.93□□□□□ -0.5
CLIP4-204ENST00000404424 SYF2O95926 243 aaKnown RBP11.93□□□□□ -0.5
CLIP4-204ENST00000404424 KIF11P52732 1056 aa11.93□□□□□ -0.5
CLIP4-204ENST00000404424 SLC20A2Q08357 652 aa11.93□□□□□ -0.5
CLIP4-204ENST00000404424 SMIM5Q71RC9 77 aa11.93□□□□□ -0.5
CLIP4-204ENST00000404424 C2CD5Q86YS7 1000 aa11.93□□□□□ -0.5
CLIP4-204ENST00000404424 CEP95Q96GE4 821 aa11.93□□□□□ -0.5
CLIP4-204ENST00000404424 TSG101Q99816 390 aa11.93□□□□□ -0.5
CLIP4-204ENST00000404424 CPVLQ9H3G5 476 aa11.93□□□□□ -0.5
CLIP4-204ENST00000404424 DEF6Q9H4E7 631 aa11.93□□□□□ -0.5
CLIP4-204ENST00000404424 PDE2AO00408 941 aaPredicted RBP11.92□□□□□ -0.5
CLIP4-204ENST00000404424 TCP1P17987 556 aaKnown RBP11.92□□□□□ -0.5
CLIP4-204ENST00000404424 KRT79Q5XKE5 535 aa11.92□□□□□ -0.5
CLIP4-204ENST00000404424 CREG2Q8IUH2 290 aa11.92□□□□□ -0.5
CLIP4-204ENST00000404424 PROM2Q8N271 834 aa11.92□□□□□ -0.5
CLIP4-204ENST00000404424 AFAP1L1Q8TED9 768 aa11.92□□□□□ -0.5
CLIP4-204ENST00000404424 RAD54LQ92698 747 aa11.92□□□□□ -0.5
CLIP4-204ENST00000404424 ARHGEF1Q92888 912 aaKnown RBP11.92□□□□□ -0.5
CLIP4-204ENST00000404424 PNMA5Q96PV4 448 aa11.92□□□□□ -0.5
CLIP4-204ENST00000404424 CRACR2AQ9BSW2 395 aa11.92□□□□□ -0.5
CLIP4-204ENST00000404424 FAM204AQ9H8W3 233 aa11.92□□□□□ -0.5
CLIP4-204ENST00000404424 VAT1LQ9HCJ6 419 aa11.92□□□□□ -0.5
CLIP4-204ENST00000404424 A0A0U1RQG5 324 aaPredicted RBP11.92□□□□□ -0.5
CLIP4-204ENST00000404424 ZNF185O15231 689 aa11.92□□□□□ -0.5
CLIP4-204ENST00000404424 PJA2O43164 708 aa11.92□□□□□ -0.5
CLIP4-204ENST00000404424 PRPF6O94906 941 aaKnown RBP11.92□□□□□ -0.5
CLIP4-204ENST00000404424 EHHADHQ08426 723 aa11.92□□□□□ -0.5
CLIP4-204ENST00000404424 SEPT2Q15019 361 aa11.92□□□□□ -0.5
CLIP4-204ENST00000404424 ASPRV1Q53RT3 343 aa11.92□□□□□ -0.5
CLIP4-204ENST00000404424 CCDC155Q8N6L0 562 aa11.92□□□□□ -0.5
CLIP4-204ENST00000404424 NUCKS1Q9H1E3 243 aaKnown RBP11.92□□□□□ -0.5
CLIP4-204ENST00000404424 MMRN2Q9H8L6 949 aa11.92□□□□□ -0.5
CLIP4-204ENST00000404424 CD209Q9NNX6 404 aa11.92□□□□□ -0.5
CLIP4-204ENST00000404424 RNF216Q9NWF9 866 aaPredicted RBP11.92□□□□□ -0.5
CLIP4-204ENST00000404424 FAM184BQ9ULE4 1060 aa11.92□□□□□ -0.5
CLIP4-204ENST00000404424 DDX60LQ5H9U9 1706 aaKnown RBP11.91□□□□□ -0.5
CLIP4-204ENST00000404424 PLIN4Q96Q06 1357 aa11.91□□□□□ -0.5
CLIP4-204ENST00000404424 KDM4FA0A1W2PPD8 638 aa11.91□□□□□ -0.5
CLIP4-204ENST00000404424 SSU72P8A0A1W2PR75 194 aa11.91□□□□□ -0.5
CLIP4-204ENST00000404424 AKR1B10O60218 316 aa11.91□□□□□ -0.5
CLIP4-204ENST00000404424 PHACTR2O75167 634 aa11.91□□□□□ -0.5
CLIP4-204ENST00000404424 PDHBP11177 359 aa11.91□□□□□ -0.5
CLIP4-204ENST00000404424 IL1R1P14778 569 aa11.91□□□□□ -0.5
CLIP4-204ENST00000404424 ATP2B4P23634 1241 aa11.91□□□□□ -0.5
CLIP4-204ENST00000404424 ADCY7P51828 1080 aa11.91□□□□□ -0.5
CLIP4-204ENST00000404424 MAPK8IP2Q13387 824 aaPredicted RBP11.91□□□□□ -0.5
CLIP4-204ENST00000404424 NFIXQ14938 502 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms