RNA–Protein interactions for RNA: ENST00000402415.7

OTOF-204, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 5,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-204ENST00000402415 USP17L8P0C7I0 530 aa13.16□□□□□ -0.3
OTOF-204ENST00000402415 EPHX2P34913 555 aa13.16□□□□□ -0.3
OTOF-204ENST00000402415 CCDC14Q49A88 953 aa13.16□□□□□ -0.3
OTOF-204ENST00000402415 C11orf57Q6ZUT1 292 aaPredicted RBP13.16□□□□□ -0.3
OTOF-204ENST00000402415 EPB41L5Q9HCM4 733 aa13.16□□□□□ -0.3
OTOF-204ENST00000402415 PALMDQ9NP74 551 aa13.16□□□□□ -0.3
OTOF-204ENST00000402415 SNRKQ9NRH2 765 aa13.16□□□□□ -0.3
OTOF-204ENST00000402415 EYA2O00167 538 aa13.15□□□□□ -0.3
OTOF-204ENST00000402415 CCND1P24385 295 aa13.15□□□□□ -0.3
OTOF-204ENST00000402415 ZNF449Q6P9G9 518 aa13.15□□□□□ -0.3
OTOF-204ENST00000402415 AFAP1L2Q8N4X5 818 aa13.15□□□□□ -0.3
OTOF-204ENST00000402415 KIFAP3Q92845 792 aa13.15□□□□□ -0.3
OTOF-204ENST00000402415 MAPK13O15264 365 aa13.15□□□□□ -0.3
OTOF-204ENST00000402415 MKRN3Q13064 507 aaKnown RBP13.15□□□□□ -0.3
OTOF-204ENST00000402415 NELFBQ8WX92 580 aa13.15□□□□□ -0.3
OTOF-204ENST00000402415 ARHGEF10LQ9HCE6 1279 aa13.15□□□□□ -0.3
OTOF-204ENST00000402415 STRN3Q13033 797 aa13.15□□□□□ -0.3
OTOF-204ENST00000402415 CUL1Q13616 776 aa13.15□□□□□ -0.3
OTOF-204ENST00000402415 DOK7Q18PE1 504 aa13.15□□□□□ -0.3
OTOF-204ENST00000402415 SLC9C2Q5TAH2 1124 aa13.15□□□□□ -0.3
OTOF-204ENST00000402415 DTHD1Q6ZMT9 781 aa13.15□□□□□ -0.3
OTOF-204ENST00000402415 ZNF653Q96CK0 615 aa13.15□□□□□ -0.3
OTOF-204ENST00000402415 EPSTI1Q96J88 318 aa13.15□□□□□ -0.3
OTOF-204ENST00000402415 UIMC1Q96RL1 719 aa13.15□□□□□ -0.3
OTOF-204ENST00000402415 PLEKHG2Q9H7P9 1386 aa13.15□□□□□ -0.3
OTOF-204ENST00000402415 TARSL2A2RTX5 802 aaKnown RBP13.15□□□□□ -0.31
OTOF-204ENST00000402415 MAN1A2O60476 641 aa13.15□□□□□ -0.31
OTOF-204ENST00000402415 RPL13P26373 211 aaKnown RBP13.15□□□□□ -0.31
OTOF-204ENST00000402415 PNOCQ13519 176 aa13.15□□□□□ -0.31
OTOF-204ENST00000402415 UAP1Q16222 522 aaPredicted RBP13.15□□□□□ -0.31
OTOF-204ENST00000402415 SYCP3Q8IZU3 236 aa13.15□□□□□ -0.31
OTOF-204ENST00000402415 ANXA1P04083 346 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 GSPT1P15170 499 aaKnown RBP13.14□□□□□ -0.31
OTOF-204ENST00000402415 ME3Q16798 604 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 ANKRD35Q8N283 1001 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 KIF9Q9HAQ2 790 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 ZNF277Q9NRM2 450 aaPredicted RBP13.14□□□□□ -0.31
OTOF-204ENST00000402415 TPCN1Q9ULQ1 816 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 PABPN1LA6NDY0 278 aaKnown RBP13.14□□□□□ -0.31
OTOF-204ENST00000402415 KCNK3O14649 394 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 GTF2IP78347 998 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 KLHL30Q0D2K2 578 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 PUM3Q15397 648 aaKnown RBP13.14□□□□□ -0.31
OTOF-204ENST00000402415 TRMT44Q8IYL2 757 aaKnown RBP13.14□□□□□ -0.31
OTOF-204ENST00000402415 BBOF1Q8ND07 529 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 EPN3Q9H201 632 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 C6orf50Q9HD87 102 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 MST1RQ04912 1400 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 KCNJ18B7U540 433 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 CD2BP2O95400 341 aaKnown RBP13.14□□□□□ -0.31
OTOF-204ENST00000402415 EEF2P13639 858 aaKnown RBP13.14□□□□□ -0.31
OTOF-204ENST00000402415 FBLN1P23142 703 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 IFNAR2P48551 515 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 PPARDQ03181 441 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 KCNJ12Q14500 433 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 PSMD6Q15008 389 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 PPP2R5BQ15173 497 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 TYW1BQ6NUM6 668 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 ENAHQ8N8S7 591 aaPredicted RBP13.14□□□□□ -0.31
OTOF-204ENST00000402415 GRK7Q8WTQ7 553 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 COG1Q8WTW3 980 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 ZBTB10Q96DT7 871 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.14□□□□□ -0.31
OTOF-204ENST00000402415 NOVA2Q9UNW9 492 aaKnown RBP13.14□□□□□ -0.31
OTOF-204ENST00000402415 ABCA6Q8N139 1617 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 TNFAIP3P21580 790 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 MYSM1Q5VVJ2 828 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 HTATIP2Q9BUP3 242 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 XDHP47989 1333 aa13.14□□□□□ -0.31
OTOF-204ENST00000402415 PFKFB2O60825 505 aa13.13□□□□□ -0.31
OTOF-204ENST00000402415 TMED10P49755 219 aaKnown RBP13.13□□□□□ -0.31
OTOF-204ENST00000402415 SCRN1Q12765 414 aa13.13□□□□□ -0.31
OTOF-204ENST00000402415 STX8Q9UNK0 236 aa13.13□□□□□ -0.31
OTOF-204ENST00000402415 TACC3Q9Y6A5 838 aa13.13□□□□□ -0.31
OTOF-204ENST00000402415 C16orf87Q6PH81 154 aa13.13□□□□□ -0.31
OTOF-204ENST00000402415 REM2Q8IYK8 340 aaPredicted RBP13.13□□□□□ -0.31
OTOF-204ENST00000402415 ZNRF3Q9ULT6 936 aa13.13□□□□□ -0.31
OTOF-204ENST00000402415 TSC22D4Q9Y3Q8 395 aa13.13□□□□□ -0.31
OTOF-204ENST00000402415 SCP2P22307 547 aa13.13□□□□□ -0.31
OTOF-204ENST00000402415 CHRNA5P30532 468 aa13.13□□□□□ -0.31
OTOF-204ENST00000402415 STYK1Q6J9G0 422 aa13.13□□□□□ -0.31
OTOF-204ENST00000402415 TRIML2Q8N7C3 387 aa13.13□□□□□ -0.31
OTOF-204ENST00000402415 RETREG2Q8NC44 543 aa13.13□□□□□ -0.31
OTOF-204ENST00000402415 IWS1Q96ST2 819 aa13.13□□□□□ -0.31
OTOF-204ENST00000402415 KRT12Q99456 494 aa13.13□□□□□ -0.31
OTOF-204ENST00000402415 NUB1Q9Y5A7 615 aa13.13□□□□□ -0.31
OTOF-204ENST00000402415 GNA11P29992 359 aa13.13□□□□□ -0.31
OTOF-204ENST00000402415 CYLC2Q14093 348 aaPredicted RBP13.13□□□□□ -0.31
OTOF-204ENST00000402415 C6orf118Q5T5N4 469 aa13.13□□□□□ -0.31
OTOF-204ENST00000402415 BEND3Q5T5X7 828 aa13.13□□□□□ -0.31
OTOF-204ENST00000402415 OTUD7AQ8TE49 926 aaPredicted RBP13.13□□□□□ -0.31
OTOF-204ENST00000402415 NRBF2Q96F24 287 aa13.13□□□□□ -0.31
OTOF-204ENST00000402415 ZBTB1Q9Y2K1 713 aa13.13□□□□□ -0.31
OTOF-204ENST00000402415 USP17L3A6NCW0 530 aa13.12□□□□□ -0.31
OTOF-204ENST00000402415 USP17L4A6NCW7 530 aa13.12□□□□□ -0.31
OTOF-204ENST00000402415 APOEP02649 317 aa13.12□□□□□ -0.31
OTOF-204ENST00000402415 SNX1Q13596 522 aa13.12□□□□□ -0.31
OTOF-204ENST00000402415 USP17L1Q7RTZ2 530 aa13.12□□□□□ -0.31
OTOF-204ENST00000402415 USP28Q96RU2 1077 aa13.12□□□□□ -0.31
OTOF-204ENST00000402415 STK24Q9Y6E0 443 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms