RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 GOLGA6BA6NDN3 693 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 PRPF6O94906 941 aaKnown RBP11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 VAV2P52735 878 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 CCDC181Q5TID7 509 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 SETDB2Q96T68 719 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 CCSER1Q9C0I3 900 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 GOLPH3Q9H4A6 298 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 ZC3H4Q9UPT8 1303 aaKnown RBP11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 USP17L5A8MUK1 530 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 EIF3CLB5ME19 914 aaKnown RBP11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 RASA1P20936 1047 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 TNNI2P48788 182 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 UBE2SQ16763 222 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 SOGA3Q5TF21 947 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 CACNA2D4Q7Z3S7 1137 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 DGKHQ86XP1 1220 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 CREG2Q8IUH2 290 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 SH2D3CQ8N5H7 860 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 CDK5RAP3Q96JB5 506 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 EIF3CQ99613 913 aaKnown RBP11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 NDST4Q9H3R1 872 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 FTCDO95954 541 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 SLC1A4P43007 532 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 CCT5P48643 541 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 ATP1A2P50993 1020 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 PICALMQ13492 652 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 NEK8Q86SG6 692 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 CCDC47Q96A33 483 aaKnown RBP11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 DHTKD1Q96HY7 919 aaPredicted RBP11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 EYA3Q99504 573 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 FGFBP2Q9BYJ0 223 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 GPCPD1Q9NPB8 672 aa11.75□□□□□ -0.53
PPP4R1-203ENST00000400556 A0A1B0GUL6 1792 aa11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 GOLGA6CA6NDK9 693 aa11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 F8W031 263 aaPredicted RBP11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 GOLGA6DP0CG33 693 aa11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 MAGEA1P43355 309 aa11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 TRADDQ15628 312 aa11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 MAP9Q49MG5 647 aa11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 TSEN2Q8NCE0 465 aaKnown RBP11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 IFT81Q8WYA0 676 aa11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 MTMR8Q96EF0 704 aa11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 CEP95Q96GE4 821 aa11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 MED4Q9NPJ6 270 aa11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 GOLGA6AQ9NYA3 693 aa11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 SAMM50Q9Y512 469 aa11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 DOT1LQ8TEK3 1739 aa11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 PCP11498 1178 aaKnown RBP11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 CKAP4Q07065 602 aaKnown RBP11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 TMED8Q6PL24 325 aaPredicted RBP11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 SPATA4Q8NEY3 305 aa11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 CALML4Q96GE6 196 aa11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 SNX12Q9UMY4 172 aa11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 GNPATO15228 680 aa11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 TACC1O75410 805 aa11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 GRB10Q13322 594 aa11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 ARL8AQ96BM9 186 aa11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 OSBPL9Q96SU4 736 aa11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 SEC63Q9UGP8 760 aaKnown RBP11.74□□□□□ -0.53
PPP4R1-203ENST00000400556 BICDL2A1A5D9 508 aa11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 GUCY2FP51841 1108 aa11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 FAM98CQ17RN3 349 aaKnown RBP11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 VWA3BQ502W6 1294 aa11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 SBK1Q52WX2 424 aa11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 SV2BQ7L1I2 683 aa11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 RBM12Q9NTZ6 932 aaKnown RBP11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 BLOC1S4Q9NUP1 217 aa11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 NPHP3-ACAD11A0A0J9YXS1 232 aa11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 MARCH6O60337 910 aa11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 USO1O60763 962 aaKnown RBP11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 KRT14P02533 472 aa11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 IVLP07476 585 aa11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 SNX29Q8TEQ0 813 aa11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 ABCA3Q99758 1704 aa11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 PALM3A6NDB9 673 aaPredicted RBP11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 TULP1O00294 542 aaPredicted RBP11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 SLC16A2P36021 539 aa11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 BTDP43251 543 aa11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 CDK8P49336 464 aa11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 AMOTL1Q8IY63 956 aa11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 REXO1Q8N1G1 1221 aaKnown RBP11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 EHBP1Q8NDI1 1231 aa11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 SH2D4AQ9H788 454 aa11.73□□□□□ -0.53
PPP4R1-203ENST00000400556 CALCRLQ16602 461 aa11.72□□□□□ -0.53
PPP4R1-203ENST00000400556 ECM1Q16610 540 aa11.72□□□□□ -0.53
PPP4R1-203ENST00000400556 FAM76AQ8TAV0 307 aa11.72□□□□□ -0.53
PPP4R1-203ENST00000400556 PNMA5Q96PV4 448 aa11.72□□□□□ -0.53
PPP4R1-203ENST00000400556 C6orf50Q9HD87 102 aa11.72□□□□□ -0.53
PPP4R1-203ENST00000400556 MKRN1Q9UHC7 482 aaKnown RBP11.72□□□□□ -0.53
PPP4R1-203ENST00000400556 TRAF5O00463 557 aa11.72□□□□□ -0.53
PPP4R1-203ENST00000400556 CNNM4Q6P4Q7 775 aa11.72□□□□□ -0.53
PPP4R1-203ENST00000400556 PACS2Q86VP3 889 aa11.72□□□□□ -0.53
PPP4R1-203ENST00000400556 DDX12PQ92771 950 aa11.72□□□□□ -0.53
PPP4R1-203ENST00000400556 NUP58Q9BVL2 599 aa11.72□□□□□ -0.53
PPP4R1-203ENST00000400556 SIK3Q9Y2K2 1263 aa11.72□□□□□ -0.53
PPP4R1-203ENST00000400556 GNAQP50148 359 aa11.72□□□□□ -0.53
PPP4R1-203ENST00000400556 TEX11Q8IYF3 940 aa11.72□□□□□ -0.53
PPP4R1-203ENST00000400556 CCDC170Q8IYT3 715 aa11.72□□□□□ -0.53
PPP4R1-203ENST00000400556 LARP4BQ92615 738 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms