RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 FRMPD2Q68DX3 1309 aaPredicted RBP10.43□□□□□ -0.74
CSMD1-202ENST00000400186 SHANK2Q9UPX8 1470 aa10.43□□□□□ -0.74
CSMD1-202ENST00000400186 NVLO15381 856 aaKnown RBP10.43□□□□□ -0.74
CSMD1-202ENST00000400186 PTGDRQ13258 359 aa10.43□□□□□ -0.74
CSMD1-202ENST00000400186 SGO2Q562F6 1265 aa10.43□□□□□ -0.74
CSMD1-202ENST00000400186 CMTR1Q8N1G2 835 aaKnown RBP10.43□□□□□ -0.74
CSMD1-202ENST00000400186 TBC1D22AQ8WUA7 517 aa10.43□□□□□ -0.74
CSMD1-202ENST00000400186 TRIM11Q96F44 468 aa10.43□□□□□ -0.74
CSMD1-202ENST00000400186 TPCN1Q9ULQ1 816 aa10.43□□□□□ -0.74
CSMD1-202ENST00000400186 ARHGEF10O15013 1369 aa10.43□□□□□ -0.74
CSMD1-202ENST00000400186 C2orf54Q08AI8 447 aa10.43□□□□□ -0.74
CSMD1-202ENST00000400186 SEPT2Q15019 361 aa10.43□□□□□ -0.74
CSMD1-202ENST00000400186 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.43□□□□□ -0.74
CSMD1-202ENST00000400186 ZC3H18Q86VM9 953 aaKnown RBP10.43□□□□□ -0.74
CSMD1-202ENST00000400186 CCDC127Q96BQ5 260 aa10.43□□□□□ -0.74
CSMD1-202ENST00000400186 ARHGEF18Q6ZSZ5 1173 aa10.43□□□□□ -0.74
CSMD1-202ENST00000400186 ANLNQ9NQW6 1124 aa10.43□□□□□ -0.74
CSMD1-202ENST00000400186 ABCC12Q96J65 1359 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 A0A087WUV0 522 aaPredicted RBP10.42□□□□□ -0.74
CSMD1-202ENST00000400186 NEK8Q86SG6 692 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 GJA10Q969M2 543 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 A0A1W2PQ27 194 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 A0A1W2PQ64 194 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 A0A1W2PQD8 194 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 ZAP70P43403 619 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 ECEL1O95672 775 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 TMOD1P28289 359 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 PKP1Q13835 747 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 CCHCR1Q8TD31 782 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 CLIC6Q96NY7 704 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 PACSIN2Q9UNF0 486 aaPredicted RBP10.42□□□□□ -0.74
CSMD1-202ENST00000400186 LONP1P36776 959 aaKnown RBP10.42□□□□□ -0.74
CSMD1-202ENST00000400186 RFX6Q8HWS3 928 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 CUEDC2Q9H467 287 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 EXOC1LA0A1B0GW35 172 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 TESPA1A2RU30 521 aaPredicted RBP10.42□□□□□ -0.74
CSMD1-202ENST00000400186 TTI1O43156 1089 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 MSH2P43246 934 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 MAP7D3Q8IWC1 876 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 ST13P4Q8IZP2 240 aaPredicted RBP10.42□□□□□ -0.74
CSMD1-202ENST00000400186 CHMP6Q96FZ7 201 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 FGD4Q96M96 766 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 MYO1FO00160 1098 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 NR1D1P20393 614 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 NNTQ13423 1086 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 SNX1Q13596 522 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 IQCB1Q15051 598 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 ANKRD35Q8N283 1001 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 EEF2KMTQ96G04 330 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 TOM1L1O75674 476 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 SLC12A1Q13621 1099 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 AOC3Q16853 763 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 KLHL29Q96CT2 875 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 KRT82Q9NSB4 513 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 ZBTB24O43167 697 aaPredicted RBP10.42□□□□□ -0.74
CSMD1-202ENST00000400186 CXCR5P32302 372 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 MICAL3Q7RTP6 2002 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 KDM5DQ9BY66 1539 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 ACTR5Q9H9F9 607 aaPredicted RBP10.42□□□□□ -0.74
CSMD1-202ENST00000400186 NRBP1Q9UHY1 535 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 PEG3Q9GZU2 1588 aa10.42□□□□□ -0.74
CSMD1-202ENST00000400186 ABL1P00519 1130 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 TMEM191BP0C7N4 346 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 RETREG2Q8NC44 543 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 TUBB6Q9BUF5 446 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 ANGPTL3Q9Y5C1 460 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 TEX14Q8IWB6 1497 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 PLTPP55058 493 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 POLE2P56282 527 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 HP1BP3Q5SSJ5 553 aaPredicted RBP10.41□□□□□ -0.74
CSMD1-202ENST00000400186 TRMT10CQ7L0Y3 403 aaKnown RBP10.41□□□□□ -0.74
CSMD1-202ENST00000400186 FANCBQ8NB91 859 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 SLC17A8Q8NDX2 589 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 RFX1P22670 979 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 XKR9Q5GH70 373 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 TDRD7Q8NHU6 1098 aaKnown RBP10.41□□□□□ -0.74
CSMD1-202ENST00000400186 TESK2Q96S53 571 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 FMO2Q99518 471 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 MAP3K19Q56UN5 1328 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 MFSD14BQ5SR56 506 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 SPOUT1Q5T280 376 aaKnown RBP10.41□□□□□ -0.74
CSMD1-202ENST00000400186 MCUQ8NE86 351 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 TRAPPC8Q9Y2L5 1435 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 DDAH1O94760 285 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 POLGP54098 1239 aaPredicted RBP10.41□□□□□ -0.74
CSMD1-202ENST00000400186 ANKRD13CQ8N6S4 541 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 DHTKD1Q96HY7 919 aaPredicted RBP10.41□□□□□ -0.74
CSMD1-202ENST00000400186 ADPGKQ9BRR6 497 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 YY1AP1Q9H869 796 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 RTEL1Q9NZ71 1219 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 MAPK4P31152 587 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 DPP8Q6V1X1 898 aaPredicted RBP10.41□□□□□ -0.74
CSMD1-202ENST00000400186 CLIC4Q9Y696 253 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 CCDC151A5D8V7 595 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 ACTN1P12814 892 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 SLCO1A2P46721 670 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 KIF22Q14807 665 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 ZSWIM6Q9HCJ5 1215 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 TBK1Q9UHD2 729 aa10.41□□□□□ -0.74
CSMD1-202ENST00000400186 SYNMO15061 1565 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms