RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 LRRC37A2A6NM11 1700 aa16.28■□□□□ 0.2
HLA-DQB1-202ENST00000399079 ALPK3Q96L96 1907 aa16.28■□□□□ 0.2
HLA-DQB1-202ENST00000399079 GCOM1H8Y6P7 765 aaPredicted RBP16.28■□□□□ 0.2
HLA-DQB1-202ENST00000399079 POLR2MP0CAP2 368 aa16.28■□□□□ 0.2
HLA-DQB1-202ENST00000399079 METAP2P50579 478 aaKnown RBP eCLIP16.28■□□□□ 0.2
HLA-DQB1-202ENST00000399079 TOB2Q14106 344 aaPredicted RBP16.28■□□□□ 0.2
HLA-DQB1-202ENST00000399079 KCNA10Q16322 511 aa16.28■□□□□ 0.2
HLA-DQB1-202ENST00000399079 ARHGEF16Q5VV41 709 aa16.28■□□□□ 0.2
HLA-DQB1-202ENST00000399079 IQSEC1Q6DN90 963 aa16.28■□□□□ 0.2
HLA-DQB1-202ENST00000399079 FCHSD1Q86WN1 690 aa16.28■□□□□ 0.2
HLA-DQB1-202ENST00000399079 C7orf61Q8IZ16 206 aa16.28■□□□□ 0.2
HLA-DQB1-202ENST00000399079 KLHDC9Q8NEP7 349 aa16.28■□□□□ 0.2
HLA-DQB1-202ENST00000399079 MPHOSPH6Q99547 160 aaKnown RBP16.28■□□□□ 0.2
HLA-DQB1-202ENST00000399079 LARP6Q9BRS8 491 aaKnown RBP16.28■□□□□ 0.2
HLA-DQB1-202ENST00000399079 WDR11Q9BZH6 1224 aa16.28■□□□□ 0.2
HLA-DQB1-202ENST00000399079 TM6SF1Q9BZW5 370 aa16.28■□□□□ 0.2
HLA-DQB1-202ENST00000399079 PXMP2Q9NR77 195 aa16.28■□□□□ 0.2
HLA-DQB1-202ENST00000399079 CTAGE5O15320 804 aa16.27■□□□□ 0.2
HLA-DQB1-202ENST00000399079 GJA9P57773 515 aa16.27■□□□□ 0.2
HLA-DQB1-202ENST00000399079 BEX3Q00994 111 aa16.27■□□□□ 0.2
HLA-DQB1-202ENST00000399079 CCSAPQ6IQ19 270 aaPredicted RBP16.27■□□□□ 0.2
HLA-DQB1-202ENST00000399079 TLK2Q86UE8 772 aa16.27■□□□□ 0.2
HLA-DQB1-202ENST00000399079 GPKOWQ92917 476 aaPredicted RBP eCLIP16.27■□□□□ 0.2
HLA-DQB1-202ENST00000399079 UPF3AQ9H1J1 476 aaKnown RBP16.27■□□□□ 0.2
HLA-DQB1-202ENST00000399079 MAP3K20Q9NYL2 800 aaKnown RBP16.27■□□□□ 0.2
HLA-DQB1-202ENST00000399079 PHF24Q9UPV7 400 aa16.27■□□□□ 0.2
HLA-DQB1-202ENST00000399079 V9GY48 417 aaPredicted RBP16.27■□□□□ 0.2
HLA-DQB1-202ENST00000399079 B4DLN1 442 aa16.26■□□□□ 0.19
HLA-DQB1-202ENST00000399079 DYNC1LI2O43237 492 aaPredicted RBP16.26■□□□□ 0.19
HLA-DQB1-202ENST00000399079 PPFIA3O75145 1194 aa16.26■□□□□ 0.19
HLA-DQB1-202ENST00000399079 NR3C2P08235 984 aa16.26■□□□□ 0.19
HLA-DQB1-202ENST00000399079 MRPL12P52815 198 aaKnown RBP16.26■□□□□ 0.19
HLA-DQB1-202ENST00000399079 RCAN1P53805 252 aa16.26■□□□□ 0.19
HLA-DQB1-202ENST00000399079 GNASQ5JWF2 1037 aa16.26■□□□□ 0.19
HLA-DQB1-202ENST00000399079 USP17L6PQ6QN14 398 aa16.26■□□□□ 0.19
HLA-DQB1-202ENST00000399079 SLC39A5Q6ZMH5 540 aa16.26■□□□□ 0.19
HLA-DQB1-202ENST00000399079 HEATR3Q7Z4Q2 680 aa16.26■□□□□ 0.19
HLA-DQB1-202ENST00000399079 IWS1Q96ST2 819 aa16.26■□□□□ 0.19
HLA-DQB1-202ENST00000399079 SPC25Q9HBM1 224 aa16.26■□□□□ 0.19
HLA-DQB1-202ENST00000399079 NR2E3Q9Y5X4 410 aa16.26■□□□□ 0.19
HLA-DQB1-202ENST00000399079 A0A1W2PQ45 241 aaPredicted RBP16.25■□□□□ 0.19
HLA-DQB1-202ENST00000399079 A0A1W2PQY0 241 aa16.25■□□□□ 0.19
HLA-DQB1-202ENST00000399079 RBM47A0AV96 593 aaKnown RBP16.25■□□□□ 0.19
HLA-DQB1-202ENST00000399079 ARIH2O95376 493 aa16.25■□□□□ 0.19
HLA-DQB1-202ENST00000399079 MYCLP12524 364 aaPredicted RBP16.25■□□□□ 0.19
HLA-DQB1-202ENST00000399079 CST5P28325 142 aaPredicted RBP16.25■□□□□ 0.19
HLA-DQB1-202ENST00000399079 PDIA3P30101 505 aaKnown RBP16.25■□□□□ 0.19
HLA-DQB1-202ENST00000399079 ACLYP53396 1101 aa16.25■□□□□ 0.19
HLA-DQB1-202ENST00000399079 CCT2P78371 535 aaKnown RBP16.25■□□□□ 0.19
HLA-DQB1-202ENST00000399079 STXBP2Q15833 593 aa16.25■□□□□ 0.19
HLA-DQB1-202ENST00000399079 DUSP28Q4G0W2 176 aa16.25■□□□□ 0.19
HLA-DQB1-202ENST00000399079 SEPT14Q6ZU15 432 aa16.25■□□□□ 0.19
HLA-DQB1-202ENST00000399079 SAMD3Q8N6K7 520 aa16.25■□□□□ 0.19
HLA-DQB1-202ENST00000399079 IL31RAQ8NI17 732 aa16.25■□□□□ 0.19
HLA-DQB1-202ENST00000399079 ZFP91Q96JP5 570 aaPredicted RBP16.25■□□□□ 0.19
HLA-DQB1-202ENST00000399079 PDCD2LQ9BRP1 358 aa16.25■□□□□ 0.19
HLA-DQB1-202ENST00000399079 MEIS2O14770 477 aa16.24■□□□□ 0.19
HLA-DQB1-202ENST00000399079 ASGR1P07306 291 aa16.24■□□□□ 0.19
HLA-DQB1-202ENST00000399079 SYN1P17600 705 aa16.24■□□□□ 0.19
HLA-DQB1-202ENST00000399079 EVCP57679 992 aa16.24■□□□□ 0.19
HLA-DQB1-202ENST00000399079 PGM5Q15124 567 aa16.24■□□□□ 0.19
HLA-DQB1-202ENST00000399079 C8orf34Q49A92 452 aa16.24■□□□□ 0.19
HLA-DQB1-202ENST00000399079 WWC2Q6AWC2 1192 aa16.24■□□□□ 0.19
HLA-DQB1-202ENST00000399079 SCFD2Q8WU76 684 aa16.24■□□□□ 0.19
HLA-DQB1-202ENST00000399079 COPS5Q92905 334 aa16.24■□□□□ 0.19
HLA-DQB1-202ENST00000399079 TSEN34Q9BSV6 310 aaKnown RBP16.24■□□□□ 0.19
HLA-DQB1-202ENST00000399079 AP5M1Q9H0R1 490 aa16.24■□□□□ 0.19
HLA-DQB1-202ENST00000399079 NCOA5Q9HCD5 579 aaKnown RBP16.24■□□□□ 0.19
HLA-DQB1-202ENST00000399079 PDRG1Q9NUG6 133 aa16.24■□□□□ 0.19
HLA-DQB1-202ENST00000399079 ZMYND8Q9ULU4 1186 aaPredicted RBP16.24■□□□□ 0.19
HLA-DQB1-202ENST00000399079 TXNP10599 105 aaKnown RBP16.24■□□□□ 0.19
HLA-DQB1-202ENST00000399079 RTP1P59025 263 aa16.24■□□□□ 0.19
HLA-DQB1-202ENST00000399079 PPP2R5BQ15173 497 aa16.24■□□□□ 0.19
HLA-DQB1-202ENST00000399079 FSCN1Q16658 493 aaKnown RBP16.24■□□□□ 0.19
HLA-DQB1-202ENST00000399079 TYW1BQ6NUM6 668 aa16.24■□□□□ 0.19
HLA-DQB1-202ENST00000399079 SMARCC2Q8TAQ2 1214 aa16.24■□□□□ 0.19
HLA-DQB1-202ENST00000399079 PSTPIP2Q9H939 334 aa16.24■□□□□ 0.19
HLA-DQB1-202ENST00000399079 ATP11BQ9Y2G3 1177 aa16.24■□□□□ 0.19
HLA-DQB1-202ENST00000399079 CCDC196A0A1B0GTZ2 297 aa16.23■□□□□ 0.19
HLA-DQB1-202ENST00000399079 MOXD2PA6NHM9 499 aa16.23■□□□□ 0.19
HLA-DQB1-202ENST00000399079 EIF3JO75822 258 aaKnown RBP16.23■□□□□ 0.19
HLA-DQB1-202ENST00000399079 RGS20O76081 388 aa16.23■□□□□ 0.19
HLA-DQB1-202ENST00000399079 ANAPC15P60006 121 aa16.23■□□□□ 0.19
HLA-DQB1-202ENST00000399079 NKX3-2P78367 333 aa16.23■□□□□ 0.19
HLA-DQB1-202ENST00000399079 UBE2SQ16763 222 aa16.23■□□□□ 0.19
HLA-DQB1-202ENST00000399079 LY6KQ17RY6 165 aa16.23■□□□□ 0.19
HLA-DQB1-202ENST00000399079 TRIM60Q495X7 471 aa16.23■□□□□ 0.19
HLA-DQB1-202ENST00000399079 VSIG10LQ86VR7 867 aa16.23■□□□□ 0.19
HLA-DQB1-202ENST00000399079 PCSK9Q8NBP7 692 aaKnown RBP16.23■□□□□ 0.19
HLA-DQB1-202ENST00000399079 CUL5Q93034 780 aa16.23■□□□□ 0.19
HLA-DQB1-202ENST00000399079 PHKBQ93100 1093 aa16.23■□□□□ 0.19
HLA-DQB1-202ENST00000399079 STARD7Q9NQZ5 370 aa16.23■□□□□ 0.19
HLA-DQB1-202ENST00000399079 Q9Y3F1 56 aa16.23■□□□□ 0.19
HLA-DQB1-202ENST00000399079 NID2Q14112 1375 aa16.23■□□□□ 0.19
HLA-DQB1-202ENST00000399079 PIK3CDO00329 1044 aa16.22■□□□□ 0.19
HLA-DQB1-202ENST00000399079 NAPAP54920 295 aa16.22■□□□□ 0.19
HLA-DQB1-202ENST00000399079 STK3Q13188 491 aa16.22■□□□□ 0.19
HLA-DQB1-202ENST00000399079 TTLL4Q14679 1199 aa16.22■□□□□ 0.19
HLA-DQB1-202ENST00000399079 SNX17Q15036 470 aa16.22■□□□□ 0.19
HLA-DQB1-202ENST00000399079 NTRK3Q16288 839 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms