RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 TNKSO95271 1327 aa13.03□□□□□ -0.32
SRMP1-201ENST00000398959 SPTBN5Q9NRC6 3674 aaKnown RBP13.02□□□□□ -0.32
SRMP1-201ENST00000398959 TCF20Q9UGU0 1960 aaKnown RBP13.02□□□□□ -0.32
SRMP1-201ENST00000398959 ZBBXA8MT70 800 aa13.02□□□□□ -0.33
SRMP1-201ENST00000398959 HIP1O00291 1037 aa13.02□□□□□ -0.33
SRMP1-201ENST00000398959 NT5C2P49902 561 aa13.02□□□□□ -0.33
SRMP1-201ENST00000398959 NUCB1Q02818 461 aa13.02□□□□□ -0.33
SRMP1-201ENST00000398959 TTLL4Q14679 1199 aa13.02□□□□□ -0.33
SRMP1-201ENST00000398959 CDC37Q16543 378 aaPredicted RBP13.02□□□□□ -0.33
SRMP1-201ENST00000398959 PPM1EQ8WY54 764 aa13.02□□□□□ -0.33
SRMP1-201ENST00000398959 SYMPKQ92797 1274 aaKnown RBP13.02□□□□□ -0.33
SRMP1-201ENST00000398959 YTHDC1Q96MU7 727 aaKnown RBP13.02□□□□□ -0.33
SRMP1-201ENST00000398959 UBA5Q9GZZ9 404 aa13.02□□□□□ -0.33
SRMP1-201ENST00000398959 NKX2-4Q9H2Z4 354 aa13.02□□□□□ -0.33
SRMP1-201ENST00000398959 OSBPL3Q9H4L5 887 aa13.02□□□□□ -0.33
SRMP1-201ENST00000398959 SLC28A3Q9HAS3 691 aa13.02□□□□□ -0.33
SRMP1-201ENST00000398959 SLC4A7Q9Y6M7 1214 aa13.02□□□□□ -0.33
SRMP1-201ENST00000398959 REV3LO60673 3130 aa13.02□□□□□ -0.33
SRMP1-201ENST00000398959 KAT6AQ92794 2004 aa13.01□□□□□ -0.33
SRMP1-201ENST00000398959 CHD7Q9P2D1 2997 aa13.01□□□□□ -0.33
SRMP1-201ENST00000398959 B4E1Z4 1266 aa13.01□□□□□ -0.33
SRMP1-201ENST00000398959 DHX16O60231 1041 aaKnown RBP13.01□□□□□ -0.33
SRMP1-201ENST00000398959 KPNA6O60684 536 aa13.01□□□□□ -0.33
SRMP1-201ENST00000398959 TXNP10599 105 aaKnown RBP13.01□□□□□ -0.33
SRMP1-201ENST00000398959 CYP2C9P11712 490 aa13.01□□□□□ -0.33
SRMP1-201ENST00000398959 EDNRBP24530 442 aa13.01□□□□□ -0.33
SRMP1-201ENST00000398959 IMMTQ16891 758 aaKnown RBP13.01□□□□□ -0.33
SRMP1-201ENST00000398959 NBPF20Q3BBV1 942 aa13.01□□□□□ -0.33
SRMP1-201ENST00000398959 ASPRV1Q53RT3 343 aa13.01□□□□□ -0.33
SRMP1-201ENST00000398959 USP38Q8NB14 1042 aa13.01□□□□□ -0.33
SRMP1-201ENST00000398959 RGS22Q8NE09 1264 aa13.01□□□□□ -0.33
SRMP1-201ENST00000398959 COPS5Q92905 334 aa13.01□□□□□ -0.33
SRMP1-201ENST00000398959 ZSCAN10Q96SZ4 725 aaPredicted RBP13.01□□□□□ -0.33
SRMP1-201ENST00000398959 ABCB11O95342 1321 aa13.01□□□□□ -0.33
SRMP1-201ENST00000398959 IGHDP01880 384 aa13□□□□□ -0.33
SRMP1-201ENST00000398959 PFKMP08237 780 aa13□□□□□ -0.33
SRMP1-201ENST00000398959 PARP1P09874 1014 aaKnown RBP13□□□□□ -0.33
SRMP1-201ENST00000398959 IGFBP4P22692 258 aa13□□□□□ -0.33
SRMP1-201ENST00000398959 RABGGTBP53611 331 aa13□□□□□ -0.33
SRMP1-201ENST00000398959 CHMP4BP1P59074 171 aa13□□□□□ -0.33
SRMP1-201ENST00000398959 NFRKBQ6P4R8 1299 aa13□□□□□ -0.33
SRMP1-201ENST00000398959 DEFB128Q7Z7B8 93 aa13□□□□□ -0.33
SRMP1-201ENST00000398959 ADGRF4Q8IZF3 695 aa13□□□□□ -0.33
SRMP1-201ENST00000398959 DSCC1Q9BVC3 393 aa13□□□□□ -0.33
SRMP1-201ENST00000398959 KRT23Q9C075 422 aa13□□□□□ -0.33
SRMP1-201ENST00000398959 CTNNA3Q9UI47 895 aa13□□□□□ -0.33
SRMP1-201ENST00000398959 YBX2Q9Y2T7 364 aaKnown RBP13□□□□□ -0.33
SRMP1-201ENST00000398959 TRANK1O15050 2925 aa12.99□□□□□ -0.33
SRMP1-201ENST00000398959 COL4A4P53420 1690 aaPredicted RBP12.99□□□□□ -0.33
SRMP1-201ENST00000398959 A6NJR5 290 aa12.99□□□□□ -0.33
SRMP1-201ENST00000398959 ACTN1P12814 892 aa12.99□□□□□ -0.33
SRMP1-201ENST00000398959 ATP2A2P16615 1042 aaKnown RBP12.99□□□□□ -0.33
SRMP1-201ENST00000398959 PPP2R2DQ66LE6 453 aa12.99□□□□□ -0.33
SRMP1-201ENST00000398959 SEPT14Q6ZU15 432 aa12.99□□□□□ -0.33
SRMP1-201ENST00000398959 MCF2L2Q86YR7 1114 aa12.99□□□□□ -0.33
SRMP1-201ENST00000398959 ENAHQ8N8S7 591 aaPredicted RBP12.99□□□□□ -0.33
SRMP1-201ENST00000398959 RETREG2Q8NC44 543 aa12.99□□□□□ -0.33
SRMP1-201ENST00000398959 NSUN6Q8TEA1 469 aaKnown RBP12.99□□□□□ -0.33
SRMP1-201ENST00000398959 PPP1R13LQ8WUF5 828 aa12.99□□□□□ -0.33
SRMP1-201ENST00000398959 ANKS1AQ92625 1134 aa12.99□□□□□ -0.33
SRMP1-201ENST00000398959 UBAC1Q9BSL1 405 aa12.99□□□□□ -0.33
SRMP1-201ENST00000398959 MAF1Q9H063 256 aa12.99□□□□□ -0.33
SRMP1-201ENST00000398959 CNNM2Q9H8M5 875 aa12.99□□□□□ -0.33
SRMP1-201ENST00000398959 VAT1LQ9HCJ6 419 aa12.99□□□□□ -0.33
SRMP1-201ENST00000398959 ZSWIM5Q9P217 1185 aa12.99□□□□□ -0.33
SRMP1-201ENST00000398959 NOD1Q9Y239 953 aa12.99□□□□□ -0.33
SRMP1-201ENST00000398959 MRPL11Q9Y3B7 192 aaKnown RBP12.99□□□□□ -0.33
SRMP1-201ENST00000398959 ARIH2O95376 493 aa12.98□□□□□ -0.33
SRMP1-201ENST00000398959 RFC2P35250 354 aa12.98□□□□□ -0.33
SRMP1-201ENST00000398959 PTPN11Q06124 597 aaPredicted RBP12.98□□□□□ -0.33
SRMP1-201ENST00000398959 STXBP2Q15833 593 aa12.98□□□□□ -0.33
SRMP1-201ENST00000398959 CCDC85BQ15834 202 aaPredicted RBP12.98□□□□□ -0.33
SRMP1-201ENST00000398959 QRICH1Q2TAL8 776 aa12.98□□□□□ -0.33
SRMP1-201ENST00000398959 TJAP1Q5JTD0 557 aa12.98□□□□□ -0.33
SRMP1-201ENST00000398959 CHST3Q7LGC8 479 aa12.98□□□□□ -0.33
SRMP1-201ENST00000398959 FBXO11Q86XK2 927 aa12.98□□□□□ -0.33
SRMP1-201ENST00000398959 EXOC6Q8TAG9 804 aa12.98□□□□□ -0.33
SRMP1-201ENST00000398959 SYTL5Q8TDW5 730 aaPredicted RBP12.98□□□□□ -0.33
SRMP1-201ENST00000398959 TBC1D5Q92609 795 aa12.98□□□□□ -0.33
SRMP1-201ENST00000398959 TAAR1Q96RJ0 339 aa12.98□□□□□ -0.33
SRMP1-201ENST00000398959 RMDN3Q96TC7 470 aa12.98□□□□□ -0.33
SRMP1-201ENST00000398959 PRDM6Q9NQX0 595 aa12.98□□□□□ -0.33
SRMP1-201ENST00000398959 PCDHA11Q9Y5I1 949 aa12.98□□□□□ -0.33
SRMP1-201ENST00000398959 MICAL3Q7RTP6 2002 aa12.98□□□□□ -0.33
SRMP1-201ENST00000398959 SIP14410 1827 aa12.97□□□□□ -0.33
SRMP1-201ENST00000398959 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
SRMP1-201ENST00000398959 GH1P01241 217 aa12.97□□□□□ -0.33
SRMP1-201ENST00000398959 MMP3P08254 477 aa12.97□□□□□ -0.33
SRMP1-201ENST00000398959 MYOGP15173 224 aa12.97□□□□□ -0.33
SRMP1-201ENST00000398959 BFSP2Q13515 415 aa12.97□□□□□ -0.33
SRMP1-201ENST00000398959 LY6KQ17RY6 165 aa12.97□□□□□ -0.33
SRMP1-201ENST00000398959 IFIT1BQ5T764 474 aaKnown RBP12.97□□□□□ -0.33
SRMP1-201ENST00000398959 ARHGEF16Q5VV41 709 aa12.97□□□□□ -0.33
SRMP1-201ENST00000398959 AFG1LQ8WV93 481 aa12.97□□□□□ -0.33
SRMP1-201ENST00000398959 VWCEQ96DN2 955 aa12.97□□□□□ -0.33
SRMP1-201ENST00000398959 IWS1Q96ST2 819 aa12.97□□□□□ -0.33
SRMP1-201ENST00000398959 FTOQ9C0B1 505 aaKnown RBP eCLIP12.97□□□□□ -0.33
SRMP1-201ENST00000398959 JMJD4Q9H9V9 463 aa12.97□□□□□ -0.33
SRMP1-201ENST00000398959 COL20A1Q9P218 1284 aa12.97□□□□□ -0.33
SRMP1-201ENST00000398959 CFBP00751 764 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms