RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 EFCAB8A8MWE9 144 aa13.89□□□□□ -0.19
CCBE1-201ENST00000398179 HNRNPH1P31943 449 aaKnown RBP13.89□□□□□ -0.19
CCBE1-201ENST00000398179 IFNA8P32881 189 aa13.89□□□□□ -0.19
CCBE1-201ENST00000398179 CASP2P42575 452 aa13.89□□□□□ -0.19
CCBE1-201ENST00000398179 TRIM25Q14258 630 aaKnown RBP13.89□□□□□ -0.19
CCBE1-201ENST00000398179 NFE2L1Q14494 772 aa13.89□□□□□ -0.19
CCBE1-201ENST00000398179 ATP2B3Q16720 1220 aa13.89□□□□□ -0.19
CCBE1-201ENST00000398179 PODNQ7Z5L7 613 aa13.89□□□□□ -0.19
CCBE1-201ENST00000398179 PJA1Q8NG27 643 aa13.89□□□□□ -0.19
CCBE1-201ENST00000398179 HYOU1Q9Y4L1 999 aa13.89□□□□□ -0.19
CCBE1-201ENST00000398179 IRF6O14896 467 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 TSPAN1O60635 241 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 ITIH3Q06033 890 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 MYO1EQ12965 1108 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 TMTC4Q5T4D3 741 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 RYDENQ9NUL5 291 aaKnown RBP13.88□□□□□ -0.19
CCBE1-201ENST00000398179 STOML2Q9UJZ1 356 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 CALM1P0DP23 149 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 CALM2P0DP24 149 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 CALM3P0DP25 149 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 GARTP22102 1010 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 GYS2P54840 703 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 RUNX1T1Q06455 604 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 MTMR3Q13615 1198 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 CCNG2Q16589 344 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 COPS6Q7L5N1 327 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 MAF1Q9H063 256 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 CCDC87Q9NVE4 849 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 CDC40O60508 579 aaKnown RBP eCLIP13.88□□□□□ -0.19
CCBE1-201ENST00000398179 PDE6AP16499 860 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 PRKAR2BP31323 418 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 MINDY2Q8NBR6 621 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 CFAP69A5D8W1 941 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 TMEM110-MUSTN1A8MSY1 372 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 TMEM127O75204 238 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 DDX5P17844 614 aaKnown RBP13.88□□□□□ -0.19
CCBE1-201ENST00000398179 ZNF76P36508 570 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 CORO7P57737 925 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 IFT88Q13099 833 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 TMEM259Q4ZIN3 620 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 TWF2Q6IBS0 349 aaKnown RBP13.88□□□□□ -0.19
CCBE1-201ENST00000398179 CADPS2Q86UW7 1296 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 AACSQ86V21 672 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 GDAP1Q8TB36 358 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 PDCD6IPQ8WUM4 868 aaKnown RBP13.88□□□□□ -0.19
CCBE1-201ENST00000398179 PHKBQ93100 1093 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 MSANTD3Q96H12 275 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 EID1Q9Y6B2 187 aa13.88□□□□□ -0.19
CCBE1-201ENST00000398179 CUX1P39880 1505 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 RASGRF2O14827 1237 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 SOX11P35716 441 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 DEFA1P59665 94 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 DEFA3P59666 94 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 ITPRIPL1Q6GPH6 555 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.87□□□□□ -0.19
CCBE1-201ENST00000398179 SRCIN1Q9C0H9 1055 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 KCTD5Q9NXV2 234 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 RABGEF1Q9UJ41 708 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 FOXN3O00409 490 aaPredicted RBP13.87□□□□□ -0.19
CCBE1-201ENST00000398179 SLC3A2P08195 630 aaKnown RBP13.87□□□□□ -0.19
CCBE1-201ENST00000398179 CLCN2P51788 898 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 ACTN3Q08043 901 aaPredicted RBP13.87□□□□□ -0.19
CCBE1-201ENST00000398179 PATL1Q86TB9 770 aaKnown RBP13.87□□□□□ -0.19
CCBE1-201ENST00000398179 CHPFQ8IZ52 775 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 DDX19AQ9NUU7 478 aaKnown RBP13.87□□□□□ -0.19
CCBE1-201ENST00000398179 NCAPD3P42695 1498 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 TAF4O00268 1085 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 SMARCA1P28370 1054 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 SLC12A2P55011 1212 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 ART5Q96L15 291 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 FAM167BQ9BTA0 163 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 CIDEBQ9UHD4 219 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 AREL1O15033 823 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 LCP1P13796 627 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 MX1P20591 662 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 WEE1P30291 646 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 GARSP41250 739 aaKnown RBP13.87□□□□□ -0.19
CCBE1-201ENST00000398179 TMEM154Q6P9G4 183 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 BRAPQ7Z569 592 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 PPP1R14AQ96A00 147 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 RRN3Q9NYV6 651 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 ATF4P18848 351 aaPredicted RBP13.87□□□□□ -0.19
CCBE1-201ENST00000398179 SDSP20132 328 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 SGO2Q562F6 1265 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 GIMAP6Q6P9H5 292 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 DYDC2Q96IM9 177 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 NACAP1Q9BZK3 213 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 FAM204AQ9H8W3 233 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 COMMD8Q9NX08 183 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 SENP1Q9P0U3 644 aa13.87□□□□□ -0.19
CCBE1-201ENST00000398179 SYNRGQ9UMZ2 1314 aa13.86□□□□□ -0.19
CCBE1-201ENST00000398179 KRT1P04264 644 aa13.86□□□□□ -0.19
CCBE1-201ENST00000398179 XPAP23025 273 aaPredicted RBP13.86□□□□□ -0.19
CCBE1-201ENST00000398179 RAPGEF1Q13905 1077 aa13.86□□□□□ -0.19
CCBE1-201ENST00000398179 C12orf50Q8NA57 414 aaPredicted RBP13.86□□□□□ -0.19
CCBE1-201ENST00000398179 GLMNQ92990 594 aa13.86□□□□□ -0.19
CCBE1-201ENST00000398179 ZCWPW1Q9H0M4 648 aa13.86□□□□□ -0.19
CCBE1-201ENST00000398179 ZFATQ9P243 1243 aa13.86□□□□□ -0.19
CCBE1-201ENST00000398179 STX5Q13190 355 aa13.86□□□□□ -0.19
CCBE1-201ENST00000398179 ODR4Q5SWX8 454 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms