RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 CKAP2LQ8IYA6 745 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 KCNH5Q8NCM2 988 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 RABGGTAQ92696 567 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 CLSTN2Q9H4D0 955 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 ZSCAN16Q9H4T2 348 aaPredicted RBP7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 ZNF446Q9NWS9 450 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 CROTQ9UKG9 612 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 KRT10P13645 584 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 TNIP1Q15025 636 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 ZNF827Q17R98 1081 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 ISM2Q6H9L7 571 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 OR8H2Q8N162 312 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 CCDC112Q8NEF3 446 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 DDX54Q8TDD1 881 aaKnown RBP7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 WHAMMQ8TF30 809 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 HAUS7Q99871 368 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 A1CFQ9NQ94 594 aaKnown RBP7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 STK39Q9UEW8 545 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 PYCARDQ9ULZ3 195 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 AFDNP55196 1824 aaKnown RBP7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 KPNA6O60684 536 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 CSPG5O95196 566 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 ANXA1P04083 346 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 RPL13P26373 211 aaKnown RBP7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 TPD52L1Q16890 204 aaPredicted RBP7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 WASHC4Q2M389 1173 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 HYIQ5T013 277 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 LUZP1Q86V48 1076 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 FRMD6Q96NE9 622 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 OSBPL2Q9H1P3 480 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 BOLA2Q9H3K6 86 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 CBX8Q9HC52 389 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 CAPN10Q9HC96 672 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 PA2G4Q9UQ80 394 aaKnown RBP7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 MAPK8IP1Q9UQF2 711 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 ARIH2O95376 493 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 CPP00450 1065 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 FERP16591 822 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 CENPAP49450 140 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 MAP7D1Q3KQU3 841 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 RIC3Q7Z5B4 369 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 KIAA1328Q86T90 577 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 IFNL3Q8IZI9 196 aa7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 LEO1Q8WVC0 666 aaPredicted RBP7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 CCDC8Q9H0W5 538 aaPredicted RBP7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 LUC7LQ9NQ29 371 aaKnown RBP7.29□□□□□ -1.24
TM9SF4-202ENST00000398022 GOLGA6L10A6NI86 522 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 RAC2P15153 192 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 HOXD11P31277 338 aaPredicted RBP7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 DNAJA1P31689 397 aaKnown RBP7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 CCT8P50990 548 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 PSMD7P51665 324 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 ZNF75DP51815 510 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 STK3Q13188 491 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 CBLBQ13191 982 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 TNNI3KQ59H18 835 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 GBP6Q6ZN66 633 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 RTL10Q7L3V2 364 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 IQCA1Q86XH1 822 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 KIF18AQ8NI77 898 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 SLC16A10Q8TF71 515 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 HVCN1Q96D96 273 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 FAM227BQ96M60 508 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 CORO1BQ9BR76 489 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 HOMER3Q9NSC5 361 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 Q4G0T1 1027 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 LURAP1LQ8IV03 231 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 TTC39CQ8N584 583 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 SPIRE2Q8WWL2 714 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 CFAP36Q96G28 342 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 SELENOOQ9BVL4 669 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 NAT10Q9H0A0 1025 aaKnown RBP7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 KCNF1Q9H3M0 494 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 RGL1Q9NZL6 768 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 ZNF254O75437 659 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 APBA3O96018 575 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 PAHP00439 452 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 GCKP35557 465 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 TCF7P36402 384 aaPredicted RBP7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 PEX5P50542 639 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 LBRQ14739 615 aaKnown RBP7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 BRDTQ58F21 947 aaPredicted RBP7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 TEX35Q5T0J7 233 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 MPRIPQ6WCQ1 1025 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 ATP6V1E2Q96A05 226 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 CCDC114Q96M63 670 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 C16orf45Q96MC5 204 aaPredicted RBP7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 CARD8Q9Y2G2 431 aa7.28□□□□□ -1.24
TM9SF4-202ENST00000398022 FAM170AA1A519 330 aa7.27□□□□□ -1.24
TM9SF4-202ENST00000398022 TRIM64A6NGJ6 449 aa7.27□□□□□ -1.24
TM9SF4-202ENST00000398022 TRIM64BA6NI03 449 aa7.27□□□□□ -1.24
TM9SF4-202ENST00000398022 AKR1B15C9JRZ8 316 aaPredicted RBP7.27□□□□□ -1.24
TM9SF4-202ENST00000398022 PPM1FP49593 454 aaPredicted RBP7.27□□□□□ -1.24
TM9SF4-202ENST00000398022 USP4Q13107 963 aa7.27□□□□□ -1.24
TM9SF4-202ENST00000398022 SNX1Q13596 522 aa7.27□□□□□ -1.24
TM9SF4-202ENST00000398022 INAQ16352 499 aa7.27□□□□□ -1.24
TM9SF4-202ENST00000398022 PKN2Q16513 984 aaKnown RBP7.27□□□□□ -1.24
TM9SF4-202ENST00000398022 STX1AQ16623 288 aa7.27□□□□□ -1.24
TM9SF4-202ENST00000398022 NANOGNBQ7Z5D8 188 aa7.27□□□□□ -1.24
TM9SF4-202ENST00000398022 PARD3BQ8TEW8 1205 aa7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms