RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 RAB30Q15771 203 aa16.68■□□□□ 0.26
SNRNP25-203ENST00000397876 MCF2L2Q86YR7 1114 aa16.68■□□□□ 0.26
SNRNP25-203ENST00000397876 WNT8AQ9H1J5 351 aa16.68■□□□□ 0.26
SNRNP25-203ENST00000397876 CDH23Q9H251 3354 aa16.67■□□□□ 0.26
SNRNP25-203ENST00000397876 GRXCR1A8MXD5 290 aa16.67■□□□□ 0.26
SNRNP25-203ENST00000397876 PBX2P40425 430 aa16.67■□□□□ 0.26
SNRNP25-203ENST00000397876 QRICH1Q2TAL8 776 aa16.67■□□□□ 0.26
SNRNP25-203ENST00000397876 FAM47CQ5HY64 1035 aa16.67■□□□□ 0.26
SNRNP25-203ENST00000397876 IFIT1BQ5T764 474 aaKnown RBP16.67■□□□□ 0.26
SNRNP25-203ENST00000397876 RPUSD2Q8IZ73 545 aaKnown RBP16.67■□□□□ 0.26
SNRNP25-203ENST00000397876 COL25A1Q9BXS0 654 aaPredicted RBP16.67■□□□□ 0.26
SNRNP25-203ENST00000397876 TRMT13Q9NUP7 481 aaKnown RBP16.67■□□□□ 0.26
SNRNP25-203ENST00000397876 MSRAQ9UJ68 235 aa16.67■□□□□ 0.26
SNRNP25-203ENST00000397876 MRPL11Q9Y3B7 192 aaKnown RBP16.67■□□□□ 0.26
SNRNP25-203ENST00000397876 A6NJR5 290 aa16.66■□□□□ 0.26
SNRNP25-203ENST00000397876 OTOP2Q7RTS6 562 aa16.66■□□□□ 0.26
SNRNP25-203ENST00000397876 FBXO11Q86XK2 927 aa16.66■□□□□ 0.26
SNRNP25-203ENST00000397876 SYTL5Q8TDW5 730 aaPredicted RBP16.66■□□□□ 0.26
SNRNP25-203ENST00000397876 NSUN6Q8TEA1 469 aaKnown RBP16.66■□□□□ 0.26
SNRNP25-203ENST00000397876 COPS5Q92905 334 aa16.66■□□□□ 0.26
SNRNP25-203ENST00000397876 GAS2L1Q99501 681 aaPredicted RBP16.66■□□□□ 0.26
SNRNP25-203ENST00000397876 CXXC1Q9P0U4 656 aaPredicted RBP16.66■□□□□ 0.26
SNRNP25-203ENST00000397876 SCN10AQ9Y5Y9 1956 aa16.66■□□□□ 0.26
SNRNP25-203ENST00000397876 MYH6P13533 1939 aa16.65■□□□□ 0.26
SNRNP25-203ENST00000397876 PFKMP08237 780 aa16.65■□□□□ 0.26
SNRNP25-203ENST00000397876 CYP2C9P11712 490 aa16.65■□□□□ 0.26
SNRNP25-203ENST00000397876 TRDNQ13061 729 aa16.65■□□□□ 0.26
SNRNP25-203ENST00000397876 NBPF20Q3BBV1 942 aa16.65■□□□□ 0.26
SNRNP25-203ENST00000397876 TTC22Q5TAA0 569 aa16.65■□□□□ 0.26
SNRNP25-203ENST00000397876 NFRKBQ6P4R8 1299 aa16.65■□□□□ 0.26
SNRNP25-203ENST00000397876 SCLYQ96I15 445 aa16.65■□□□□ 0.26
SNRNP25-203ENST00000397876 TAAR1Q96RJ0 339 aa16.65■□□□□ 0.26
SNRNP25-203ENST00000397876 IWS1Q96ST2 819 aa16.65■□□□□ 0.26
SNRNP25-203ENST00000397876 RMDN3Q96TC7 470 aa16.65■□□□□ 0.26
SNRNP25-203ENST00000397876 IL25Q9H293 177 aa16.65■□□□□ 0.26
SNRNP25-203ENST00000397876 JMJD4Q9H9V9 463 aa16.65■□□□□ 0.26
SNRNP25-203ENST00000397876 VAT1LQ9HCJ6 419 aa16.65■□□□□ 0.26
SNRNP25-203ENST00000397876 ZBBXA8MT70 800 aa16.64■□□□□ 0.25
SNRNP25-203ENST00000397876 ARIH2O95376 493 aa16.64■□□□□ 0.25
SNRNP25-203ENST00000397876 GSPT1P15170 499 aaKnown RBP16.64■□□□□ 0.25
SNRNP25-203ENST00000397876 PTPN11Q06124 597 aaPredicted RBP16.64■□□□□ 0.25
SNRNP25-203ENST00000397876 STXBP2Q15833 593 aa16.64■□□□□ 0.25
SNRNP25-203ENST00000397876 SEPT14Q6ZU15 432 aa16.64■□□□□ 0.25
SNRNP25-203ENST00000397876 RUFY2Q8WXA3 655 aa16.64■□□□□ 0.25
SNRNP25-203ENST00000397876 TBC1D5Q92609 795 aa16.64■□□□□ 0.25
SNRNP25-203ENST00000397876 AMNQ9BXJ7 453 aa16.64■□□□□ 0.25
SNRNP25-203ENST00000397876 COL20A1Q9P218 1284 aa16.64■□□□□ 0.25
SNRNP25-203ENST00000397876 NOD1Q9Y239 953 aa16.64■□□□□ 0.25
SNRNP25-203ENST00000397876 SLC4A7Q9Y6M7 1214 aa16.64■□□□□ 0.25
SNRNP25-203ENST00000397876 CFBP00751 764 aa16.63■□□□□ 0.25
SNRNP25-203ENST00000397876 GH1P01241 217 aa16.63■□□□□ 0.25
SNRNP25-203ENST00000397876 PDE4AP27815 886 aa16.63■□□□□ 0.25
SNRNP25-203ENST00000397876 ARHGEF16Q5VV41 709 aa16.63■□□□□ 0.25
SNRNP25-203ENST00000397876 CCDC62Q6P9F0 684 aa16.63■□□□□ 0.25
SNRNP25-203ENST00000397876 NKX2-4Q9H2Z4 354 aa16.63■□□□□ 0.25
SNRNP25-203ENST00000397876 SLC28A3Q9HAS3 691 aa16.63■□□□□ 0.25
SNRNP25-203ENST00000397876 EYSQ5T1H1 3165 aa16.62■□□□□ 0.25
SNRNP25-203ENST00000397876 KLRF2D3W0D1 207 aa16.62■□□□□ 0.25
SNRNP25-203ENST00000397876 PITPNM1O00562 1244 aa16.62■□□□□ 0.25
SNRNP25-203ENST00000397876 MMP3P08254 477 aa16.62■□□□□ 0.25
SNRNP25-203ENST00000397876 ACTN1P12814 892 aa16.62■□□□□ 0.25
SNRNP25-203ENST00000397876 EIF2AK2P19525 551 aaKnown RBP16.62■□□□□ 0.25
SNRNP25-203ENST00000397876 RFC2P35250 354 aa16.62■□□□□ 0.25
SNRNP25-203ENST00000397876 CHMP4BP1P59074 171 aa16.62■□□□□ 0.25
SNRNP25-203ENST00000397876 SEC23AQ15436 765 aa16.62■□□□□ 0.25
SNRNP25-203ENST00000397876 CYB5R4Q7L1T6 521 aa16.62■□□□□ 0.25
SNRNP25-203ENST00000397876 STAG2Q8N3U4 1231 aa16.62■□□□□ 0.25
SNRNP25-203ENST00000397876 RETREG2Q8NC44 543 aa16.62■□□□□ 0.25
SNRNP25-203ENST00000397876 AFG1LQ8WV93 481 aa16.62■□□□□ 0.25
SNRNP25-203ENST00000397876 PRDM12Q9H4Q4 367 aa16.62■□□□□ 0.25
SNRNP25-203ENST00000397876 SUPT16HQ9Y5B9 1047 aaKnown RBP16.62■□□□□ 0.25
SNRNP25-203ENST00000397876 U3KPZ7 1027 aaPredicted RBP16.62■□□□□ 0.25
SNRNP25-203ENST00000397876 TANC1Q9C0D5 1861 aa16.62■□□□□ 0.25
SNRNP25-203ENST00000397876 GBF1Q92538 1859 aa16.61■□□□□ 0.25
SNRNP25-203ENST00000397876 KIAA1217Q5T5P2 1943 aa16.61■□□□□ 0.25
SNRNP25-203ENST00000397876 ERICH2A1L162 156 aa16.61■□□□□ 0.25
SNRNP25-203ENST00000397876 ARHGAP1Q07960 439 aa16.61■□□□□ 0.25
SNRNP25-203ENST00000397876 BFSP2Q13515 415 aa16.61■□□□□ 0.25
SNRNP25-203ENST00000397876 LY6KQ17RY6 165 aa16.61■□□□□ 0.25
SNRNP25-203ENST00000397876 CHST3Q7LGC8 479 aa16.61■□□□□ 0.25
SNRNP25-203ENST00000397876 DEFB128Q7Z7B8 93 aa16.61■□□□□ 0.25
SNRNP25-203ENST00000397876 RALYLQ86SE5 291 aaKnown RBP16.61■□□□□ 0.25
SNRNP25-203ENST00000397876 CCDC155Q8N6L0 562 aa16.61■□□□□ 0.25
SNRNP25-203ENST00000397876 PPP1R13LQ8WUF5 828 aa16.61■□□□□ 0.25
SNRNP25-203ENST00000397876 PXMP2Q9NR77 195 aa16.61■□□□□ 0.25
SNRNP25-203ENST00000397876 MAD2L2Q9UI95 211 aa16.61■□□□□ 0.25
SNRNP25-203ENST00000397876 YBX2Q9Y2T7 364 aaKnown RBP16.61■□□□□ 0.25
SNRNP25-203ENST00000397876 ZBTB5O15062 677 aa16.6■□□□□ 0.25
SNRNP25-203ENST00000397876 EIF3JO75822 258 aaKnown RBP16.6■□□□□ 0.25
SNRNP25-203ENST00000397876 NR3C2P08235 984 aa16.6■□□□□ 0.25
SNRNP25-203ENST00000397876 ATP2A2P16615 1042 aaKnown RBP16.6■□□□□ 0.25
SNRNP25-203ENST00000397876 CASTP20810 708 aaKnown RBP16.6■□□□□ 0.25
SNRNP25-203ENST00000397876 HSD17B4P51659 736 aa16.6■□□□□ 0.25
SNRNP25-203ENST00000397876 GHRHRQ02643 423 aa16.6■□□□□ 0.25
SNRNP25-203ENST00000397876 TRAF1Q13077 416 aa16.6■□□□□ 0.25
SNRNP25-203ENST00000397876 SART3Q15020 963 aaKnown RBP16.6■□□□□ 0.25
SNRNP25-203ENST00000397876 PPP2R2DQ66LE6 453 aa16.6■□□□□ 0.25
SNRNP25-203ENST00000397876 USP38Q8NB14 1042 aa16.6■□□□□ 0.25
SNRNP25-203ENST00000397876 VWCEQ96DN2 955 aa16.6■□□□□ 0.25
SNRNP25-203ENST00000397876 MTMR8Q96EF0 704 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms