RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 SLC12A7Q9Y666 1083 aa16.16■□□□□ 0.18
SEC13-204ENST00000397099 A0A0U1RQG5 324 aaPredicted RBP16.15■□□□□ 0.18
SEC13-204ENST00000397099 ADCY6O43306 1168 aa16.15■□□□□ 0.18
SEC13-204ENST00000397099 KPNA6O60684 536 aa16.15■□□□□ 0.18
SEC13-204ENST00000397099 CLTBP09497 229 aa16.15■□□□□ 0.18
SEC13-204ENST00000397099 SMPD1P17405 629 aa16.15■□□□□ 0.18
SEC13-204ENST00000397099 HSD17B4P51659 736 aa16.15■□□□□ 0.18
SEC13-204ENST00000397099 TTLL4Q14679 1199 aa16.15■□□□□ 0.18
SEC13-204ENST00000397099 STXBP2Q15833 593 aa16.15■□□□□ 0.18
SEC13-204ENST00000397099 ARHGEF16Q5VV41 709 aa16.15■□□□□ 0.18
SEC13-204ENST00000397099 GPR153Q6NV75 609 aa16.15■□□□□ 0.18
SEC13-204ENST00000397099 EEPD1Q7L9B9 569 aa16.15■□□□□ 0.18
SEC13-204ENST00000397099 SH3RF1Q7Z6J0 888 aa16.15■□□□□ 0.18
SEC13-204ENST00000397099 TEX2Q8IWB9 1127 aa16.15■□□□□ 0.18
SEC13-204ENST00000397099 RRP36Q96EU6 259 aaKnown RBP16.15■□□□□ 0.18
SEC13-204ENST00000397099 POLR3EQ9NVU0 708 aa16.15■□□□□ 0.18
SEC13-204ENST00000397099 SEC63Q9UGP8 760 aaKnown RBP16.15■□□□□ 0.18
SEC13-204ENST00000397099 KIAA1217Q5T5P2 1943 aa16.15■□□□□ 0.18
SEC13-204ENST00000397099 BAZ2BQ9UIF8 2168 aaKnown RBP16.14■□□□□ 0.17
SEC13-204ENST00000397099 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.14■□□□□ 0.17
SEC13-204ENST00000397099 TRIM43BA6NCK2 446 aa16.14■□□□□ 0.17
SEC13-204ENST00000397099 MYADML2A6NDP7 307 aa16.14■□□□□ 0.17
SEC13-204ENST00000397099 DYNC1LI2O43237 492 aaPredicted RBP16.14■□□□□ 0.17
SEC13-204ENST00000397099 CFBP00751 764 aa16.14■□□□□ 0.17
SEC13-204ENST00000397099 KCNV1Q6PIU1 500 aa16.14■□□□□ 0.17
SEC13-204ENST00000397099 Q7L0L9 218 aa16.14■□□□□ 0.17
SEC13-204ENST00000397099 DHX32Q7L7V1 743 aaKnown RBP16.14■□□□□ 0.17
SEC13-204ENST00000397099 HOMER1Q86YM7 354 aa16.14■□□□□ 0.17
SEC13-204ENST00000397099 TRIM43Q96BQ3 446 aaPredicted RBP16.14■□□□□ 0.17
SEC13-204ENST00000397099 PURBQ96QR8 312 aaKnown RBP16.14■□□□□ 0.17
SEC13-204ENST00000397099 PDGFCQ9NRA1 345 aa16.14■□□□□ 0.17
SEC13-204ENST00000397099 LTBP2Q14767 1821 aa16.13■□□□□ 0.17
SEC13-204ENST00000397099 GCOM1H8Y6P7 765 aaPredicted RBP16.13■□□□□ 0.17
SEC13-204ENST00000397099 ARVCFO00192 962 aa16.13■□□□□ 0.17
SEC13-204ENST00000397099 KIAA0355O15063 1070 aa16.13■□□□□ 0.17
SEC13-204ENST00000397099 TLR3O15455 904 aaKnown RBP16.13■□□□□ 0.17
SEC13-204ENST00000397099 EIF3JO75822 258 aaKnown RBP16.13■□□□□ 0.17
SEC13-204ENST00000397099 POLR2MP0CAP2 368 aa16.13■□□□□ 0.17
SEC13-204ENST00000397099 CDK7P50613 346 aa16.13■□□□□ 0.17
SEC13-204ENST00000397099 RCAN1P53805 252 aa16.13■□□□□ 0.17
SEC13-204ENST00000397099 IRX5P78411 483 aaPredicted RBP16.13■□□□□ 0.17
SEC13-204ENST00000397099 PIGSQ96S52 555 aa16.13■□□□□ 0.17
SEC13-204ENST00000397099 SENP2Q9HC62 589 aa16.13■□□□□ 0.17
SEC13-204ENST00000397099 TMEM39AQ9NV64 488 aa16.13■□□□□ 0.17
SEC13-204ENST00000397099 RBM28Q9NW13 759 aaKnown RBP16.13■□□□□ 0.17
SEC13-204ENST00000397099 CTAGE5O15320 804 aa16.12■□□□□ 0.17
SEC13-204ENST00000397099 CYTH3O43739 400 aa16.12■□□□□ 0.17
SEC13-204ENST00000397099 EIF5BO60841 1220 aaKnown RBP16.12■□□□□ 0.17
SEC13-204ENST00000397099 STAM2O75886 525 aa16.12■□□□□ 0.17
SEC13-204ENST00000397099 RAG1P15918 1043 aa16.12■□□□□ 0.17
SEC13-204ENST00000397099 EXOSC10Q01780 885 aaKnown RBP16.12■□□□□ 0.17
SEC13-204ENST00000397099 SKAP1Q86WV1 359 aa16.12■□□□□ 0.17
SEC13-204ENST00000397099 FANCBQ8NB91 859 aa16.12■□□□□ 0.17
SEC13-204ENST00000397099 KCNB2Q92953 911 aa16.12■□□□□ 0.17
SEC13-204ENST00000397099 TAAR1Q96RJ0 339 aa16.12■□□□□ 0.17
SEC13-204ENST00000397099 GPHNQ9NQX3 736 aaPredicted RBP16.12■□□□□ 0.17
SEC13-204ENST00000397099 PXMP2Q9NR77 195 aa16.12■□□□□ 0.17
SEC13-204ENST00000397099 DDX49Q9Y6V7 483 aaKnown RBP16.12■□□□□ 0.17
SEC13-204ENST00000397099 PPP1R11O60927 126 aaPredicted RBP16.11■□□□□ 0.17
SEC13-204ENST00000397099 NR3C2P08235 984 aa16.11■□□□□ 0.17
SEC13-204ENST00000397099 TXNP10599 105 aaKnown RBP16.11■□□□□ 0.17
SEC13-204ENST00000397099 SHHQ15465 462 aa16.11■□□□□ 0.17
SEC13-204ENST00000397099 SLC43A3Q8NBI5 491 aa16.11■□□□□ 0.17
SEC13-204ENST00000397099 OR6J1Q8NGC5 347 aa16.11■□□□□ 0.17
SEC13-204ENST00000397099 TBC1D5Q92609 795 aa16.11■□□□□ 0.17
SEC13-204ENST00000397099 CUL5Q93034 780 aa16.11■□□□□ 0.17
SEC13-204ENST00000397099 OPLAHO14841 1288 aa16.1■□□□□ 0.17
SEC13-204ENST00000397099 TGFB3P10600 412 aa16.1■□□□□ 0.17
SEC13-204ENST00000397099 PSMA5P28066 241 aa16.1■□□□□ 0.17
SEC13-204ENST00000397099 HSPA4P34932 840 aa16.1■□□□□ 0.17
SEC13-204ENST00000397099 BEX3Q00994 111 aa16.1■□□□□ 0.17
SEC13-204ENST00000397099 C9orf50Q5SZB4 431 aa16.1■□□□□ 0.17
SEC13-204ENST00000397099 COL20A1Q9P218 1284 aa16.1■□□□□ 0.17
SEC13-204ENST00000397099 CCDC196A0A1B0GTZ2 297 aa16.09■□□□□ 0.17
SEC13-204ENST00000397099 A6NJR5 290 aa16.09■□□□□ 0.17
SEC13-204ENST00000397099 PIK3CDO00329 1044 aa16.09■□□□□ 0.17
SEC13-204ENST00000397099 GH1P01241 217 aa16.09■□□□□ 0.17
SEC13-204ENST00000397099 SUPT20HL2P0C7V6 817 aa16.09■□□□□ 0.17
SEC13-204ENST00000397099 EIF2AK2P19525 551 aaKnown RBP16.09■□□□□ 0.17
SEC13-204ENST00000397099 ITGB8P26012 769 aa16.09■□□□□ 0.17
SEC13-204ENST00000397099 CCND2P30279 289 aa16.09■□□□□ 0.17
SEC13-204ENST00000397099 FGD1P98174 961 aa16.09■□□□□ 0.17
SEC13-204ENST00000397099 FAAP100Q0VG06 881 aa16.09■□□□□ 0.17
SEC13-204ENST00000397099 ITGA7Q13683 1181 aa16.09■□□□□ 0.17
SEC13-204ENST00000397099 XRRA1Q6P2D8 792 aa16.09■□□□□ 0.17
SEC13-204ENST00000397099 CCDC62Q6P9F0 684 aa16.09■□□□□ 0.17
SEC13-204ENST00000397099 APOA5Q6Q788 366 aa16.09■□□□□ 0.17
SEC13-204ENST00000397099 CXCL17Q6UXB2 119 aa16.09■□□□□ 0.17
SEC13-204ENST00000397099 VSIG10LQ86VR7 867 aa16.09■□□□□ 0.17
SEC13-204ENST00000397099 FBXL16Q8N461 479 aa16.09■□□□□ 0.17
SEC13-204ENST00000397099 PDCD2LQ9BRP1 358 aa16.09■□□□□ 0.17
SEC13-204ENST00000397099 MTG1Q9BT17 334 aaPredicted RBP16.09■□□□□ 0.17
SEC13-204ENST00000397099 hCG_1984214I3L0E3 225 aa16.08■□□□□ 0.16
SEC13-204ENST00000397099 ZBTB43O43298 467 aa16.08■□□□□ 0.16
SEC13-204ENST00000397099 TIMP1P01033 207 aa16.08■□□□□ 0.16
SEC13-204ENST00000397099 PURAQ00577 322 aaKnown RBP16.08■□□□□ 0.16
SEC13-204ENST00000397099 FPGSQ05932 587 aa16.08■□□□□ 0.16
SEC13-204ENST00000397099 LAMC2Q13753 1193 aa16.08■□□□□ 0.16
SEC13-204ENST00000397099 SLC35G1Q2M3R5 365 aa16.08■□□□□ 0.16
SEC13-204ENST00000397099 GNPTABQ3T906 1256 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms