RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 LEMD3Q9Y2U8 911 aa19.01■□□□□ 0.63
MCF2L-208ENST00000397030 EIF2AK2P19525 551 aaKnown RBP19.01■□□□□ 0.63
MCF2L-208ENST00000397030 CACNB3P54284 484 aa19.01■□□□□ 0.63
MCF2L-208ENST00000397030 ADKP55263 362 aaKnown RBP19.01■□□□□ 0.63
MCF2L-208ENST00000397030 GIGYF1O75420 1035 aaPredicted RBP19.01■□□□□ 0.63
MCF2L-208ENST00000397030 MYO1EQ12965 1108 aa19.01■□□□□ 0.63
MCF2L-208ENST00000397030 MCTP2Q6DN12 878 aa19.01■□□□□ 0.63
MCF2L-208ENST00000397030 PDCD6IPQ8WUM4 868 aaKnown RBP19.01■□□□□ 0.63
MCF2L-208ENST00000397030 EEF2KMTQ96G04 330 aa19.01■□□□□ 0.63
MCF2L-208ENST00000397030 JPH2Q9BR39 696 aaPredicted RBP19.01■□□□□ 0.63
MCF2L-208ENST00000397030 YEATS2Q9ULM3 1422 aa19.01■□□□□ 0.63
MCF2L-208ENST00000397030 KRIT1O00522 736 aa19.01■□□□□ 0.63
MCF2L-208ENST00000397030 CLIC2O15247 247 aa19.01■□□□□ 0.63
MCF2L-208ENST00000397030 BMP3P12645 472 aa19.01■□□□□ 0.63
MCF2L-208ENST00000397030 NAA35Q5VZE5 725 aa19.01■□□□□ 0.63
MCF2L-208ENST00000397030 ANGPTL8Q6UXH0 198 aa19.01■□□□□ 0.63
MCF2L-208ENST00000397030 TTC1Q99614 292 aa19.01■□□□□ 0.63
MCF2L-208ENST00000397030 OR6B2Q6IFH4 312 aa19■□□□□ 0.63
MCF2L-208ENST00000397030 SCN4BQ8IWT1 228 aa19■□□□□ 0.63
MCF2L-208ENST00000397030 EXT2Q93063 718 aa19■□□□□ 0.63
MCF2L-208ENST00000397030 LBHD1Q9BQE6 289 aaPredicted RBP19■□□□□ 0.63
MCF2L-208ENST00000397030 PUS3Q9BZE2 481 aaKnown RBP19■□□□□ 0.63
MCF2L-208ENST00000397030 STK38LQ9Y2H1 464 aa19■□□□□ 0.63
MCF2L-208ENST00000397030 ZBTB1Q9Y2K1 713 aa19■□□□□ 0.63
MCF2L-208ENST00000397030 ATP10AO60312 1499 aa19■□□□□ 0.63
MCF2L-208ENST00000397030 POLR3AO14802 1390 aaPredicted RBP19■□□□□ 0.63
MCF2L-208ENST00000397030 THOC5Q13769 683 aaKnown RBP19■□□□□ 0.63
MCF2L-208ENST00000397030 ZBTB7BO15156 539 aaPredicted RBP19■□□□□ 0.63
MCF2L-208ENST00000397030 PDXDC2PQ6P474 469 aa19■□□□□ 0.63
MCF2L-208ENST00000397030 TBRG4Q969Z0 631 aaKnown RBP eCLIP19■□□□□ 0.631e-6■■■■■ 58
MCF2L-208ENST00000397030 SEMA3EO15041 775 aa19■□□□□ 0.63
MCF2L-208ENST00000397030 PPFIA4O75335 1185 aa19■□□□□ 0.63
MCF2L-208ENST00000397030 MFAP3P55082 362 aa19■□□□□ 0.63
MCF2L-208ENST00000397030 PTK2Q05397 1052 aa19■□□□□ 0.63
MCF2L-208ENST00000397030 FANCBQ8NB91 859 aa19■□□□□ 0.63
MCF2L-208ENST00000397030 PDZD8Q8NEN9 1154 aa19■□□□□ 0.63
MCF2L-208ENST00000397030 SFMBT1Q9UHJ3 866 aa19■□□□□ 0.63
MCF2L-208ENST00000397030 TMEM94Q12767 1356 aa19■□□□□ 0.63
MCF2L-208ENST00000397030 KIAA0232Q92628 1395 aa19■□□□□ 0.63
MCF2L-208ENST00000397030 STX2P32856 288 aa18.99■□□□□ 0.63
MCF2L-208ENST00000397030 AOC3Q16853 763 aa18.99■□□□□ 0.63
MCF2L-208ENST00000397030 TSR3Q9UJK0 312 aaKnown RBP18.99■□□□□ 0.63
MCF2L-208ENST00000397030 ATF2P15336 505 aa18.99■□□□□ 0.63
MCF2L-208ENST00000397030 UBE2SQ16763 222 aa18.99■□□□□ 0.63
MCF2L-208ENST00000397030 ANO4Q32M45 955 aa18.99■□□□□ 0.63
MCF2L-208ENST00000397030 ACCSLQ4AC99 568 aa18.99■□□□□ 0.63
MCF2L-208ENST00000397030 DSCC1Q9BVC3 393 aa18.99■□□□□ 0.63
MCF2L-208ENST00000397030 PSAPP07602 524 aa18.99■□□□□ 0.63
MCF2L-208ENST00000397030 URGCPQ8TCY9 931 aa18.99■□□□□ 0.63
MCF2L-208ENST00000397030 AFG1LQ8WV93 481 aa18.99■□□□□ 0.63
MCF2L-208ENST00000397030 SASH1O94885 1247 aa18.99■□□□□ 0.63
MCF2L-208ENST00000397030 DDIT3P35638 169 aa18.99■□□□□ 0.63
MCF2L-208ENST00000397030 INPP1P49441 399 aa18.99■□□□□ 0.63
MCF2L-208ENST00000397030 SNX1Q13596 522 aa18.99■□□□□ 0.63
MCF2L-208ENST00000397030 CATSPER4Q7RTX7 472 aa18.99■□□□□ 0.63
MCF2L-208ENST00000397030 UNC5CLQ8IV45 518 aa18.99■□□□□ 0.63
MCF2L-208ENST00000397030 THEM5Q8N1Q8 247 aa18.99■□□□□ 0.63
MCF2L-208ENST00000397030 BANK1Q8NDB2 785 aa18.99■□□□□ 0.63
MCF2L-208ENST00000397030 RPF1Q9H9Y2 349 aaKnown RBP18.99■□□□□ 0.63
MCF2L-208ENST00000397030 LLGL1Q15334 1064 aa18.98■□□□□ 0.63
MCF2L-208ENST00000397030 NPR1P16066 1061 aa18.98■□□□□ 0.63
MCF2L-208ENST00000397030 MESDQ14696 234 aa18.98■□□□□ 0.63
MCF2L-208ENST00000397030 CDO1Q16878 200 aa18.98■□□□□ 0.63
MCF2L-208ENST00000397030 HVCN1Q96D96 273 aa18.98■□□□□ 0.63
MCF2L-208ENST00000397030 ZNF233A6NK53 670 aa18.98■□□□□ 0.63
MCF2L-208ENST00000397030 CCDC157Q569K6 752 aa18.98■□□□□ 0.63
MCF2L-208ENST00000397030 PIGSQ96S52 555 aa18.98■□□□□ 0.63
MCF2L-208ENST00000397030 RAB17Q9H0T7 212 aa18.98■□□□□ 0.63
MCF2L-208ENST00000397030 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.98■□□□□ 0.63
MCF2L-208ENST00000397030 FAM8A1Q9UBU6 413 aa18.98■□□□□ 0.63
MCF2L-208ENST00000397030 OR6B3Q8NGW1 331 aa18.98■□□□□ 0.63
MCF2L-208ENST00000397030 DYNLL2Q96FJ2 89 aa18.98■□□□□ 0.63
MCF2L-208ENST00000397030 U2AF2P26368 475 aaKnown RBP eCLIP18.98■□□□□ 0.632e-7■■□□□ 11.9
MCF2L-208ENST00000397030 GTF2A1P52655 376 aaPredicted RBP18.98■□□□□ 0.63
MCF2L-208ENST00000397030 NSUN2Q08J23 767 aaKnown RBP eCLIP18.98■□□□□ 0.63
MCF2L-208ENST00000397030 MAP7D3Q8IWC1 876 aa18.98■□□□□ 0.63
MCF2L-208ENST00000397030 SPDL1Q96EA4 605 aa18.98■□□□□ 0.63
MCF2L-208ENST00000397030 FGD4Q96M96 766 aa18.98■□□□□ 0.63
MCF2L-208ENST00000397030 NT5C1BQ96P26 610 aa18.98■□□□□ 0.63
MCF2L-208ENST00000397030 ZHX2Q9Y6X8 837 aa18.98■□□□□ 0.63
MCF2L-208ENST00000397030 EIF2AK4Q9P2K8 1649 aaKnown RBP18.98■□□□□ 0.63
MCF2L-208ENST00000397030 RECQLP46063 649 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-208ENST00000397030 PDE1BQ01064 536 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 WRNIP1Q96S55 665 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 DDAH1O94760 285 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 PCCAP05165 728 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-208ENST00000397030 EN1Q05925 392 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-208ENST00000397030 DCAF4L1Q3SXM0 396 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 OTUD5Q96G74 571 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 ACCSQ96QU6 501 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 CARD6Q9BX69 1037 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 PRAG1Q86YV5 1406 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 ZMYM6O95789 1325 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 ESRRBO95718 433 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 HOXB7P09629 217 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 ATP6V1E1P36543 226 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 LRRC41Q15345 812 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 KCTD6Q8NC69 237 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-208ENST00000397030 HINFPQ9BQA5 517 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms