RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 NFRKBQ6P4R8 1299 aa26.6■■□□□ 1.85
CSNK1E-203ENST00000396832 INTS5Q6P9B9 1019 aaKnown RBP26.6■■□□□ 1.85
CSNK1E-203ENST00000396832 OSBPL9Q96SU4 736 aa26.6■■□□□ 1.85
CSNK1E-203ENST00000396832 GOLGB1Q14789 3259 aaKnown RBP26.59■■□□□ 1.85
CSNK1E-203ENST00000396832 CCDC181Q5TID7 509 aa26.59■■□□□ 1.85
CSNK1E-203ENST00000396832 RCSD1Q6JBY9 416 aa26.59■■□□□ 1.85
CSNK1E-203ENST00000396832 ZKSCAN4Q969J2 545 aaPredicted RBP26.59■■□□□ 1.85
CSNK1E-203ENST00000396832 FAM84BQ96KN1 310 aaPredicted RBP26.59■■□□□ 1.85
CSNK1E-203ENST00000396832 PYM1Q9BRP8 204 aaKnown RBP26.59■■□□□ 1.85
CSNK1E-203ENST00000396832 THAP9Q9H5L6 903 aa26.59■■□□□ 1.85
CSNK1E-203ENST00000396832 NHSL1Q5SYE7 1610 aa26.59■■□□□ 1.85
CSNK1E-203ENST00000396832 TFAP4Q01664 338 aa26.59■■□□□ 1.85
CSNK1E-203ENST00000396832 C2CD5Q86YS7 1000 aa26.59■■□□□ 1.85
CSNK1E-203ENST00000396832 SLC44A5Q8NCS7 719 aa26.59■■□□□ 1.85
CSNK1E-203ENST00000396832 BANK1Q8NDB2 785 aa26.59■■□□□ 1.85
CSNK1E-203ENST00000396832 CCDC42Q96M95 316 aa26.59■■□□□ 1.85
CSNK1E-203ENST00000396832 NUP58Q9BVL2 599 aa26.59■■□□□ 1.85
CSNK1E-203ENST00000396832 PRLRP16471 622 aa26.58■■□□□ 1.85
CSNK1E-203ENST00000396832 TRAPPC10P48553 1259 aa26.58■■□□□ 1.85
CSNK1E-203ENST00000396832 LETM2Q2VYF4 491 aa26.58■■□□□ 1.85
CSNK1E-203ENST00000396832 ERFEQ4G0M1 354 aa26.58■■□□□ 1.85
CSNK1E-203ENST00000396832 KDM7AQ6ZMT4 941 aa26.58■■□□□ 1.85
CSNK1E-203ENST00000396832 YTHDF3Q7Z739 585 aaKnown RBP26.58■■□□□ 1.85
CSNK1E-203ENST00000396832 CELF1Q92879 486 aaKnown RBP26.58■■□□□ 1.85
CSNK1E-203ENST00000396832 SLC39A2Q9NP94 309 aa26.58■■□□□ 1.85
CSNK1E-203ENST00000396832 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.58■■□□□ 1.85
CSNK1E-203ENST00000396832 CHUKO15111 745 aa26.58■■□□□ 1.85
CSNK1E-203ENST00000396832 KIF1CO43896 1103 aaKnown RBP26.58■■□□□ 1.85
CSNK1E-203ENST00000396832 USO1O60763 962 aaKnown RBP26.58■■□□□ 1.85
CSNK1E-203ENST00000396832 CAMTA2O94983 1202 aa26.58■■□□□ 1.85
CSNK1E-203ENST00000396832 RDXP35241 583 aaKnown RBP26.58■■□□□ 1.85
CSNK1E-203ENST00000396832 PNMA1Q8ND90 353 aa26.58■■□□□ 1.85
CSNK1E-203ENST00000396832 GIMAP7Q8NHV1 300 aa26.58■■□□□ 1.85
CSNK1E-203ENST00000396832 ZNF473Q8WTR7 871 aaKnown RBP26.58■■□□□ 1.85
CSNK1E-203ENST00000396832 NSUN4Q96CB9 384 aaKnown RBP26.58■■□□□ 1.85
CSNK1E-203ENST00000396832 PCDHA4Q9UN74 947 aa26.58■■□□□ 1.85
CSNK1E-203ENST00000396832 TXNRD1Q16881 649 aa26.58■■□□□ 1.84
CSNK1E-203ENST00000396832 CCDC87Q9NVE4 849 aa26.58■■□□□ 1.84
CSNK1E-203ENST00000396832 PCDHA6Q9UN73 950 aa26.58■■□□□ 1.84
CSNK1E-203ENST00000396832 STX8Q9UNK0 236 aa26.58■■□□□ 1.84
CSNK1E-203ENST00000396832 PCDHA8Q9Y5H6 950 aa26.58■■□□□ 1.84
CSNK1E-203ENST00000396832 SLC35G1Q2M3R5 365 aa26.57■■□□□ 1.84
CSNK1E-203ENST00000396832 CCDC43Q96MW1 224 aaKnown RBP26.57■■□□□ 1.84
CSNK1E-203ENST00000396832 DISP2A7MBM2 1401 aa26.57■■□□□ 1.84
CSNK1E-203ENST00000396832 ZNF804BA4D1E1 1349 aa26.57■■□□□ 1.84
CSNK1E-203ENST00000396832 APBA1Q02410 837 aa26.57■■□□□ 1.84
CSNK1E-203ENST00000396832 ARL6IP4Q66PJ3 421 aaKnown RBP26.57■■□□□ 1.84
CSNK1E-203ENST00000396832 C8orf74Q6P047 294 aa26.57■■□□□ 1.84
CSNK1E-203ENST00000396832 RETREG2Q8NC44 543 aa26.57■■□□□ 1.84
CSNK1E-203ENST00000396832 GIMAP8Q8ND71 665 aaPredicted RBP26.57■■□□□ 1.84
CSNK1E-203ENST00000396832 PAGR1Q9BTK6 254 aa26.57■■□□□ 1.84
CSNK1E-203ENST00000396832 KLC4Q9NSK0 619 aa26.57■■□□□ 1.84
CSNK1E-203ENST00000396832 ZNF233A6NK53 670 aa26.56■■□□□ 1.84
CSNK1E-203ENST00000396832 SEC24CP53992 1094 aa26.56■■□□□ 1.84
CSNK1E-203ENST00000396832 CFAP58Q5T655 872 aa26.56■■□□□ 1.84
CSNK1E-203ENST00000396832 TMC4Q7Z404 712 aa26.56■■□□□ 1.84
CSNK1E-203ENST00000396832 IFIH1Q9BYX4 1025 aaKnown RBP26.56■■□□□ 1.84
CSNK1E-203ENST00000396832 SH2D4AQ9H788 454 aa26.56■■□□□ 1.84
CSNK1E-203ENST00000396832 TCP1P17987 556 aaKnown RBP26.56■■□□□ 1.84
CSNK1E-203ENST00000396832 IQCKQ8N0W5 287 aa26.56■■□□□ 1.84
CSNK1E-203ENST00000396832 HYOU1Q9Y4L1 999 aa26.56■■□□□ 1.84
CSNK1E-203ENST00000396832 CCNT1O60563 726 aaKnown RBP26.55■■□□□ 1.84
CSNK1E-203ENST00000396832 TECP42680 631 aa26.55■■□□□ 1.84
CSNK1E-203ENST00000396832 ACTN3Q08043 901 aaPredicted RBP26.55■■□□□ 1.84
CSNK1E-203ENST00000396832 CCDC155Q8N6L0 562 aa26.55■■□□□ 1.84
CSNK1E-203ENST00000396832 P2RX5Q93086 422 aa26.55■■□□□ 1.84
CSNK1E-203ENST00000396832 CCT8L2Q96SF2 557 aa26.55■■□□□ 1.84
CSNK1E-203ENST00000396832 VCPKMTQ9H867 229 aa26.55■■□□□ 1.84
CSNK1E-203ENST00000396832 MMRN2Q9H8L6 949 aa26.55■■□□□ 1.84
CSNK1E-203ENST00000396832 IL17RBQ9NRM6 502 aa26.55■■□□□ 1.84
CSNK1E-203ENST00000396832 PPP1R37O75864 691 aa26.55■■□□□ 1.84
CSNK1E-203ENST00000396832 RHOBTB3O94955 611 aa26.55■■□□□ 1.84
CSNK1E-203ENST00000396832 TNFRSF8P28908 595 aa26.55■■□□□ 1.84
CSNK1E-203ENST00000396832 PAFAH1B1P43034 410 aa26.55■■□□□ 1.84
CSNK1E-203ENST00000396832 PTGISQ16647 500 aa26.55■■□□□ 1.84
CSNK1E-203ENST00000396832 MIIPQ5JXC2 388 aa26.55■■□□□ 1.84
CSNK1E-203ENST00000396832 EP400NLQ6ZTU2 488 aa26.55■■□□□ 1.84
CSNK1E-203ENST00000396832 UIMC1Q96RL1 719 aa26.55■■□□□ 1.84
CSNK1E-203ENST00000396832 RBM12Q9NTZ6 932 aaKnown RBP26.55■■□□□ 1.84
CSNK1E-203ENST00000396832 PCDHA13Q9Y5I0 950 aa26.55■■□□□ 1.84
CSNK1E-203ENST00000396832 BUB1O43683 1085 aa26.54■■□□□ 1.84
CSNK1E-203ENST00000396832 CYTH3O43739 400 aa26.54■■□□□ 1.84
CSNK1E-203ENST00000396832 CALML3P27482 149 aa26.54■■□□□ 1.84
CSNK1E-203ENST00000396832 SMTNP53814 917 aa26.54■■□□□ 1.84
CSNK1E-203ENST00000396832 IFT88Q13099 833 aa26.54■■□□□ 1.84
CSNK1E-203ENST00000396832 CCDC40Q4G0X9 1142 aa26.54■■□□□ 1.84
CSNK1E-203ENST00000396832 CABP7Q86V35 215 aa26.54■■□□□ 1.84
CSNK1E-203ENST00000396832 CRNKL1Q9BZJ0 848 aaKnown RBP26.54■■□□□ 1.84
CSNK1E-203ENST00000396832 VAT1LQ9HCJ6 419 aa26.54■■□□□ 1.84
CSNK1E-203ENST00000396832 MINPP1Q9UNW1 487 aa26.54■■□□□ 1.84
CSNK1E-203ENST00000396832 CLGNO14967 610 aa26.54■■□□□ 1.84
CSNK1E-203ENST00000396832 FAM153BP0C7A2 387 aa26.54■■□□□ 1.84
CSNK1E-203ENST00000396832 NR1D1P20393 614 aa26.54■■□□□ 1.84
CSNK1E-203ENST00000396832 KIF5BP33176 963 aa26.54■■□□□ 1.84
CSNK1E-203ENST00000396832 NEDD9Q14511 834 aa26.54■■□□□ 1.84
CSNK1E-203ENST00000396832 FAM153CQ494X1 144 aa26.54■■□□□ 1.84
CSNK1E-203ENST00000396832 DYMQ7RTS9 669 aa26.54■■□□□ 1.84
CSNK1E-203ENST00000396832 TACO1Q9BSH4 297 aaKnown RBP26.54■■□□□ 1.84
CSNK1E-203ENST00000396832 KBTBD4Q9NVX7 518 aa26.54■■□□□ 1.84
CSNK1E-203ENST00000396832 FAM153AQ9UHL3 310 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms