RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 C4orf32Q8N8J7 132 aa15.86■□□□□ 0.13
CLIP2-203ENST00000395060 GIMAP8Q8ND71 665 aaPredicted RBP15.86■□□□□ 0.13
CLIP2-203ENST00000395060 TULP1O00294 542 aaPredicted RBP15.86■□□□□ 0.13
CLIP2-203ENST00000395060 MAP2K2P36507 400 aa15.86■□□□□ 0.13
CLIP2-203ENST00000395060 IL6STP40189 918 aaPredicted RBP15.86■□□□□ 0.13
CLIP2-203ENST00000395060 TXKP42681 527 aa15.86■□□□□ 0.13
CLIP2-203ENST00000395060 PFKFB3Q16875 520 aaPredicted RBP15.86■□□□□ 0.13
CLIP2-203ENST00000395060 SLC44A5Q8NCS7 719 aa15.86■□□□□ 0.13
CLIP2-203ENST00000395060 STRCQ7RTU9 1775 aa15.86■□□□□ 0.13
CLIP2-203ENST00000395060 LSP1P33241 339 aa15.85■□□□□ 0.13
CLIP2-203ENST00000395060 ITPK1Q13572 414 aa15.85■□□□□ 0.13
CLIP2-203ENST00000395060 RIOK1Q9BRS2 568 aaKnown RBP15.85■□□□□ 0.13
CLIP2-203ENST00000395060 SEMA6BQ9H3T3 888 aa15.85■□□□□ 0.13
CLIP2-203ENST00000395060 MCM9Q9NXL9 1143 aa15.85■□□□□ 0.13
CLIP2-203ENST00000395060 LOC102724428A0A0B4J2F2 783 aa15.85■□□□□ 0.13
CLIP2-203ENST00000395060 ANO9A1A5B4 782 aa15.85■□□□□ 0.13
CLIP2-203ENST00000395060 SIK1P57059 783 aa15.85■□□□□ 0.13
CLIP2-203ENST00000395060 TFAP4Q01664 338 aa15.85■□□□□ 0.13
CLIP2-203ENST00000395060 CEP57Q86XR8 500 aa15.85■□□□□ 0.13
CLIP2-203ENST00000395060 CCDC170Q8IYT3 715 aa15.85■□□□□ 0.13
CLIP2-203ENST00000395060 MARCH10Q8NA82 808 aaPredicted RBP15.85■□□□□ 0.13
CLIP2-203ENST00000395060 ZNF384Q8TF68 577 aa15.85■□□□□ 0.13
CLIP2-203ENST00000395060 TLR10Q9BXR5 811 aa15.85■□□□□ 0.13
CLIP2-203ENST00000395060 TOGARAM1Q9Y4F4 1720 aa15.85■□□□□ 0.13
CLIP2-203ENST00000395060 PALMO75781 387 aa15.85■□□□□ 0.13
CLIP2-203ENST00000395060 CCNE1P24864 410 aa15.85■□□□□ 0.13
CLIP2-203ENST00000395060 TMOD1P28289 359 aa15.85■□□□□ 0.13
CLIP2-203ENST00000395060 ODF2Q5BJF6 829 aa15.85■□□□□ 0.13
CLIP2-203ENST00000395060 INTS5Q6P9B9 1019 aaKnown RBP15.85■□□□□ 0.13
CLIP2-203ENST00000395060 MMGT1Q8N4V1 131 aa15.85■□□□□ 0.13
CLIP2-203ENST00000395060 TRIM9Q9C026 710 aa15.85■□□□□ 0.13
CLIP2-203ENST00000395060 NDST4Q9H3R1 872 aa15.85■□□□□ 0.13
CLIP2-203ENST00000395060 TCP11L1Q9NUJ3 509 aa15.85■□□□□ 0.13
CLIP2-203ENST00000395060 CCDC87Q9NVE4 849 aa15.85■□□□□ 0.13
CLIP2-203ENST00000395060 MYH6P13533 1939 aa15.84■□□□□ 0.13
CLIP2-203ENST00000395060 FRMD3A2A2Y4 597 aa15.84■□□□□ 0.13
CLIP2-203ENST00000395060 CACNB1Q02641 598 aaPredicted RBP15.84■□□□□ 0.13
CLIP2-203ENST00000395060 NAA35Q5VZE5 725 aa15.84■□□□□ 0.13
CLIP2-203ENST00000395060 FNBP4Q8N3X1 1017 aaPredicted RBP15.84■□□□□ 0.13
CLIP2-203ENST00000395060 KIAA0895Q8NCT3 520 aa15.84■□□□□ 0.13
CLIP2-203ENST00000395060 FAM212AQ96EL1 285 aa15.84■□□□□ 0.13
CLIP2-203ENST00000395060 SH3GL2Q99962 352 aa15.84■□□□□ 0.13
CLIP2-203ENST00000395060 PACSIN1Q9BY11 444 aa15.84■□□□□ 0.13
CLIP2-203ENST00000395060 RHOBTB3O94955 611 aa15.84■□□□□ 0.13
CLIP2-203ENST00000395060 NR1D1P20393 614 aa15.84■□□□□ 0.13
CLIP2-203ENST00000395060 PRDX5P30044 214 aa15.84■□□□□ 0.13
CLIP2-203ENST00000395060 CCDC91Q7Z6B0 441 aa15.84■□□□□ 0.13
CLIP2-203ENST00000395060 ZNF34Q8IZ26 560 aa15.84■□□□□ 0.13
CLIP2-203ENST00000395060 DDX60Q8IY21 1712 aaKnown RBP15.84■□□□□ 0.13
CLIP2-203ENST00000395060 CPP00450 1065 aa15.83■□□□□ 0.13
CLIP2-203ENST00000395060 FAM182BQ5T319 152 aa15.83■□□□□ 0.13
CLIP2-203ENST00000395060 KIRREL3Q8IZU9 778 aa15.83■□□□□ 0.13
CLIP2-203ENST00000395060 NOC3LQ8WTT2 800 aaKnown RBP15.83■□□□□ 0.13
CLIP2-203ENST00000395060 AP1M1Q9BXS5 423 aa15.83■□□□□ 0.13
CLIP2-203ENST00000395060 PCDHA6Q9UN73 950 aa15.83■□□□□ 0.13
CLIP2-203ENST00000395060 PCDHA8Q9Y5H6 950 aa15.83■□□□□ 0.13
CLIP2-203ENST00000395060 NUP188Q5SRE5 1749 aa15.83■□□□□ 0.13
CLIP2-203ENST00000395060 SF3B2Q13435 895 aaKnown RBP15.83■□□□□ 0.12
CLIP2-203ENST00000395060 PNMA1Q8ND90 353 aa15.83■□□□□ 0.12
CLIP2-203ENST00000395060 NUP58Q9BVL2 599 aa15.83■□□□□ 0.12
CLIP2-203ENST00000395060 GEMIN8Q9NWZ8 242 aaKnown RBP15.83■□□□□ 0.12
CLIP2-203ENST00000395060 PCDHA4Q9UN74 947 aa15.83■□□□□ 0.12
CLIP2-203ENST00000395060 CALM1P0DP23 149 aa15.83■□□□□ 0.12
CLIP2-203ENST00000395060 CALM2P0DP24 149 aa15.83■□□□□ 0.12
CLIP2-203ENST00000395060 CALM3P0DP25 149 aa15.83■□□□□ 0.12
CLIP2-203ENST00000395060 SETQ01105 290 aaPredicted RBP15.83■□□□□ 0.12
CLIP2-203ENST00000395060 KLHDC7AQ5VTJ3 777 aa15.83■□□□□ 0.12
CLIP2-203ENST00000395060 NELFCDQ8IXH7 590 aa15.83■□□□□ 0.12
CLIP2-203ENST00000395060 ZNF473Q8WTR7 871 aaKnown RBP15.83■□□□□ 0.12
CLIP2-203ENST00000395060 CASKIN2Q8WXE0 1202 aa15.83■□□□□ 0.12
CLIP2-203ENST00000395060 CCDC47Q96A33 483 aaKnown RBP15.83■□□□□ 0.12
CLIP2-203ENST00000395060 TSGA10Q9BZW7 698 aa15.83■□□□□ 0.12
CLIP2-203ENST00000395060 TRIM31Q9BZY9 425 aa15.83■□□□□ 0.12
CLIP2-203ENST00000395060 CXorf56Q9H5V9 222 aa15.83■□□□□ 0.12
CLIP2-203ENST00000395060 PLAAQ9Y263 795 aa15.83■□□□□ 0.12
CLIP2-203ENST00000395060 UBR2Q8IWV8 1755 aa15.83■□□□□ 0.12
CLIP2-203ENST00000395060 TCP1P17987 556 aaKnown RBP15.82■□□□□ 0.12
CLIP2-203ENST00000395060 VWA3BQ502W6 1294 aa15.82■□□□□ 0.12
CLIP2-203ENST00000395060 CHADLQ6NUI6 762 aa15.82■□□□□ 0.12
CLIP2-203ENST00000395060 SLC51AQ86UW1 340 aa15.82■□□□□ 0.12
CLIP2-203ENST00000395060 SCLT1Q96NL6 688 aa15.82■□□□□ 0.12
CLIP2-203ENST00000395060 PURBQ96QR8 312 aaKnown RBP15.82■□□□□ 0.12
CLIP2-203ENST00000395060 ZHX3Q9H4I2 956 aa15.82■□□□□ 0.12
CLIP2-203ENST00000395060 KBTBD4Q9NVX7 518 aa15.82■□□□□ 0.12
CLIP2-203ENST00000395060 BIN2Q9UBW5 565 aaPredicted RBP15.82■□□□□ 0.12
CLIP2-203ENST00000395060 BAZ2AQ9UIF9 1905 aaKnown RBP15.82■□□□□ 0.12
CLIP2-203ENST00000395060 NID2Q14112 1375 aa15.82■□□□□ 0.12
CLIP2-203ENST00000395060 MEFVO15553 781 aaPredicted RBP15.82■□□□□ 0.12
CLIP2-203ENST00000395060 E2F5Q15329 346 aa15.82■□□□□ 0.12
CLIP2-203ENST00000395060 POTEDQ86YR6 584 aa15.82■□□□□ 0.12
CLIP2-203ENST00000395060 SUGP1Q8IWZ8 645 aaKnown RBP15.82■□□□□ 0.12
CLIP2-203ENST00000395060 NOX5Q96PH1 765 aa15.82■□□□□ 0.12
CLIP2-203ENST00000395060 CCT8L2Q96SF2 557 aa15.82■□□□□ 0.12
CLIP2-203ENST00000395060 SAP30BPQ9UHR5 308 aaKnown RBP15.82■□□□□ 0.12
CLIP2-203ENST00000395060 PLAGL2Q9UPG8 496 aa15.82■□□□□ 0.12
CLIP2-203ENST00000395060 LRP6O75581 1613 aa15.82■□□□□ 0.12
CLIP2-203ENST00000395060 DDAH1O94760 285 aa15.81■□□□□ 0.12
CLIP2-203ENST00000395060 POLR2FP61218 127 aaKnown RBP15.81■□□□□ 0.12
CLIP2-203ENST00000395060 RAPGEF1Q13905 1077 aa15.81■□□□□ 0.12
CLIP2-203ENST00000395060 CCDC152Q4G0S7 254 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms