RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 SPC24Q8NBT2 197 aa16.85■□□□□ 0.29
CCT4-201ENST00000394440 RASSF8Q8NHQ8 419 aa16.85■□□□□ 0.29
CCT4-201ENST00000394440 LENG9Q96B70 501 aa16.85■□□□□ 0.29
CCT4-201ENST00000394440 WRNIP1Q96S55 665 aa16.85■□□□□ 0.29
CCT4-201ENST00000394440 RNF181Q9P0P0 153 aa16.85■□□□□ 0.29
CCT4-201ENST00000394440 OTOFQ9HC10 1997 aa16.85■□□□□ 0.29
CCT4-201ENST00000394440 CYP3A4P08684 503 aa16.85■□□□□ 0.29
CCT4-201ENST00000394440 CD44P16070 742 aaKnown RBP16.85■□□□□ 0.29
CCT4-201ENST00000394440 HOXA13P31271 388 aaPredicted RBP16.85■□□□□ 0.29
CCT4-201ENST00000394440 DGKZQ13574 1117 aa16.85■□□□□ 0.29
CCT4-201ENST00000394440 Q4G0T1 1027 aa16.85■□□□□ 0.29
CCT4-201ENST00000394440 LDHDQ86WU2 507 aa16.85■□□□□ 0.29
CCT4-201ENST00000394440 PRPF38AQ8NAV1 312 aaKnown RBP16.85■□□□□ 0.29
CCT4-201ENST00000394440 KLRG1Q96E93 195 aa16.85■□□□□ 0.29
CCT4-201ENST00000394440 PNMA5Q96PV4 448 aa16.85■□□□□ 0.29
CCT4-201ENST00000394440 SLF1Q9BQI6 1058 aa16.85■□□□□ 0.29
CCT4-201ENST00000394440 EMILIN3Q9NT22 766 aa16.85■□□□□ 0.29
CCT4-201ENST00000394440 MRPL11Q9Y3B7 192 aaKnown RBP16.85■□□□□ 0.29
CCT4-201ENST00000394440 COL11A1P12107 1806 aaPredicted RBP16.84■□□□□ 0.29
CCT4-201ENST00000394440 GOLGA6L6A8MZA4 724 aa16.84■□□□□ 0.29
CCT4-201ENST00000394440 RPN1P04843 607 aaKnown RBP16.84■□□□□ 0.29
CCT4-201ENST00000394440 PTPRAP18433 802 aa16.84■□□□□ 0.29
CCT4-201ENST00000394440 VCAM1P19320 739 aa16.84■□□□□ 0.29
CCT4-201ENST00000394440 LMOD1P29536 600 aaPredicted RBP16.84■□□□□ 0.29
CCT4-201ENST00000394440 MTMR2Q13614 643 aa16.84■□□□□ 0.29
CCT4-201ENST00000394440 ZKSCAN4Q969J2 545 aaPredicted RBP16.84■□□□□ 0.29
CCT4-201ENST00000394440 PLIN2Q99541 437 aa16.84■□□□□ 0.29
CCT4-201ENST00000394440 PTPRFP10586 1907 aa16.84■□□□□ 0.29
CCT4-201ENST00000394440 PPP1R3GB7ZBB8 358 aa16.84■□□□□ 0.29
CCT4-201ENST00000394440 KLRC4O43908 158 aa16.84■□□□□ 0.29
CCT4-201ENST00000394440 ICAM1P05362 532 aa16.84■□□□□ 0.29
CCT4-201ENST00000394440 ATP1A3P13637 1013 aa16.84■□□□□ 0.29
CCT4-201ENST00000394440 USP14P54578 494 aa16.84■□□□□ 0.29
CCT4-201ENST00000394440 ETNPPLQ8TBG4 499 aa16.84■□□□□ 0.29
CCT4-201ENST00000394440 TBC1D5Q92609 795 aa16.84■□□□□ 0.29
CCT4-201ENST00000394440 CALML4Q96GE6 196 aa16.84■□□□□ 0.29
CCT4-201ENST00000394440 BLOC1S4Q9NUP1 217 aa16.84■□□□□ 0.29
CCT4-201ENST00000394440 TBX3O15119 743 aa16.83■□□□□ 0.28
CCT4-201ENST00000394440 ZNF18P17022 549 aa16.83■□□□□ 0.28
CCT4-201ENST00000394440 SEMA3FQ13275 785 aa16.83■□□□□ 0.28
CCT4-201ENST00000394440 KCNB1Q14721 858 aa16.83■□□□□ 0.28
CCT4-201ENST00000394440 NUDT12Q9BQG2 462 aa16.83■□□□□ 0.28
CCT4-201ENST00000394440 ADARB2Q9NS39 739 aaKnown RBP16.83■□□□□ 0.28
CCT4-201ENST00000394440 FANCLQ9NW38 375 aa16.83■□□□□ 0.28
CCT4-201ENST00000394440 RMND1Q9NWS8 449 aa16.83■□□□□ 0.28
CCT4-201ENST00000394440 STK17AQ9UEE5 414 aa16.83■□□□□ 0.28
CCT4-201ENST00000394440 FZD1Q9UP38 647 aa16.83■□□□□ 0.28
CCT4-201ENST00000394440 FAM86B1E9PN63 330 aa16.83■□□□□ 0.28
CCT4-201ENST00000394440 TPM3P06753 285 aa16.83■□□□□ 0.28
CCT4-201ENST00000394440 FAM86B2P0C5J1 330 aa16.83■□□□□ 0.28
CCT4-201ENST00000394440 CLCN1P35523 988 aa16.83■□□□□ 0.28
CCT4-201ENST00000394440 BACE1P56817 501 aa16.83■□□□□ 0.28
CCT4-201ENST00000394440 SPP2Q13103 211 aa16.83■□□□□ 0.28
CCT4-201ENST00000394440 TMEM119Q4V9L6 283 aa16.83■□□□□ 0.28
CCT4-201ENST00000394440 NOL9Q5SY16 702 aaKnown RBP16.83■□□□□ 0.28
CCT4-201ENST00000394440 ZNF658Q5TYW1 1059 aaPredicted RBP16.83■□□□□ 0.28
CCT4-201ENST00000394440 GJA10Q969M2 543 aa16.83■□□□□ 0.28
CCT4-201ENST00000394440 AS3MTQ9HBK9 375 aa16.83■□□□□ 0.28
CCT4-201ENST00000394440 PCDHA12Q9UN75 941 aa16.83■□□□□ 0.28
CCT4-201ENST00000394440 GCOM1H8Y6P7 765 aaPredicted RBP16.82■□□□□ 0.28
CCT4-201ENST00000394440 CFBP00751 764 aa16.82■□□□□ 0.28
CCT4-201ENST00000394440 POLR2MP0CAP2 368 aa16.82■□□□□ 0.28
CCT4-201ENST00000394440 MSNP26038 577 aaKnown RBP16.82■□□□□ 0.28
CCT4-201ENST00000394440 FANCCQ00597 558 aa16.82■□□□□ 0.28
CCT4-201ENST00000394440 GHRHRQ02643 423 aa16.82■□□□□ 0.28
CCT4-201ENST00000394440 HYIQ5T013 277 aa16.82■□□□□ 0.28
CCT4-201ENST00000394440 SMYD4Q8IYR2 804 aaPredicted RBP16.82■□□□□ 0.28
CCT4-201ENST00000394440 ZNF280CQ8ND82 737 aa16.82■□□□□ 0.28
CCT4-201ENST00000394440 C12orf42Q96LP6 360 aa16.82■□□□□ 0.28
CCT4-201ENST00000394440 TRIM9Q9C026 710 aa16.82■□□□□ 0.28
CCT4-201ENST00000394440 XPO4Q9C0E2 1151 aaKnown RBP16.82■□□□□ 0.28
CCT4-201ENST00000394440 KCNF1Q9H3M0 494 aa16.82■□□□□ 0.28
CCT4-201ENST00000394440 SLC38A10Q9HBR0 1119 aa16.82■□□□□ 0.28
CCT4-201ENST00000394440 NFE2L3Q9Y4A8 694 aa16.82■□□□□ 0.28
CCT4-201ENST00000394440 SPIRE1Q08AE8 756 aa16.81■□□□□ 0.28
CCT4-201ENST00000394440 KRT79Q5XKE5 535 aa16.81■□□□□ 0.28
CCT4-201ENST00000394440 TRMT44Q8IYL2 757 aaKnown RBP16.81■□□□□ 0.28
CCT4-201ENST00000394440 SLFN12Q8IYM2 578 aa16.81■□□□□ 0.28
CCT4-201ENST00000394440 SNX29Q8TEQ0 813 aa16.81■□□□□ 0.28
CCT4-201ENST00000394440 C7orf25Q9BPX7 421 aa16.81■□□□□ 0.28
CCT4-201ENST00000394440 IFNKQ9P0W0 207 aa16.81■□□□□ 0.28
CCT4-201ENST00000394440 NRBP1Q9UHY1 535 aa16.81■□□□□ 0.28
CCT4-201ENST00000394440 PPP1R9AQ9ULJ8 1098 aa16.81■□□□□ 0.28
CCT4-201ENST00000394440 RHOBTB3O94955 611 aa16.81■□□□□ 0.28
CCT4-201ENST00000394440 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.81■□□□□ 0.282e-10■■■■■ 29.8
CCT4-201ENST00000394440 AGBL1Q96MI9 1066 aa16.81■□□□□ 0.28
CCT4-201ENST00000394440 ZNF830Q96NB3 372 aaPredicted RBP16.81■□□□□ 0.28
CCT4-201ENST00000394440 IGLV3-22A0A075B6J6 115 aa16.8■□□□□ 0.28
CCT4-201ENST00000394440 HSD17B4P51659 736 aa16.8■□□□□ 0.28
CCT4-201ENST00000394440 CCDC144BQ3MJ40 725 aa16.8■□□□□ 0.28
CCT4-201ENST00000394440 SUPT20HL1Q3ZLR7 823 aa16.8■□□□□ 0.28
CCT4-201ENST00000394440 PRR16Q569H4 304 aa16.8■□□□□ 0.28
CCT4-201ENST00000394440 C9orf131Q5VYM1 1079 aa16.8■□□□□ 0.28
CCT4-201ENST00000394440 FCHSD1Q86WN1 690 aa16.8■□□□□ 0.28
CCT4-201ENST00000394440 RPAP3Q9H6T3 665 aaPredicted RBP16.8■□□□□ 0.28
CCT4-201ENST00000394440 PICK1Q9NRD5 415 aa16.8■□□□□ 0.28
CCT4-201ENST00000394440 CCPG1Q9ULG6 757 aa16.8■□□□□ 0.28
CCT4-201ENST00000394440 SYNRGQ9UMZ2 1314 aa16.8■□□□□ 0.28
CCT4-201ENST00000394440 SLC26A4O43511 780 aa16.8■□□□□ 0.28
CCT4-201ENST00000394440 ZNF500O60304 480 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms