RNA–Protein interactions for RNA: ENST00000394241.3

TGFA-202, Transcript of transforming growth factor alpha, humanhuman

TSL 3

Gene TGFA, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-202ENST00000394241 RRP36Q96EU6 259 aaKnown RBP18.67■□□□□ 0.58
TGFA-202ENST00000394241 ASB2Q96Q27 587 aa18.67■□□□□ 0.58
TGFA-202ENST00000394241 PIGSQ96S52 555 aa18.67■□□□□ 0.58
TGFA-202ENST00000394241 ACAD9Q9H845 621 aa18.67■□□□□ 0.58
TGFA-202ENST00000394241 THEGQ9P2T0 379 aa18.67■□□□□ 0.58
TGFA-202ENST00000394241 TPCN1Q9ULQ1 816 aa18.67■□□□□ 0.58
TGFA-202ENST00000394241 STRNO43815 780 aa18.66■□□□□ 0.58
TGFA-202ENST00000394241 ST18O60284 1047 aa18.66■□□□□ 0.58
TGFA-202ENST00000394241 FCER1AP12319 257 aa18.66■□□□□ 0.58
TGFA-202ENST00000394241 RAG1P15918 1043 aa18.66■□□□□ 0.58
TGFA-202ENST00000394241 ADORA2AP29274 412 aa18.66■□□□□ 0.58
TGFA-202ENST00000394241 CCT2P78371 535 aaKnown RBP18.66■□□□□ 0.58
TGFA-202ENST00000394241 FPGSQ05932 587 aa18.66■□□□□ 0.58
TGFA-202ENST00000394241 TRAF1Q13077 416 aa18.66■□□□□ 0.58
TGFA-202ENST00000394241 STK3Q13188 491 aa18.66■□□□□ 0.58
TGFA-202ENST00000394241 KCTD2Q14681 263 aa18.66■□□□□ 0.58
TGFA-202ENST00000394241 ABRAQ8N0Z2 381 aa18.66■□□□□ 0.58
TGFA-202ENST00000394241 CCDC82Q8N4S0 544 aa18.66■□□□□ 0.58
TGFA-202ENST00000394241 PIBF1Q8WXW3 757 aa18.66■□□□□ 0.58
TGFA-202ENST00000394241 TIFAQ96CG3 184 aa18.66■□□□□ 0.58
TGFA-202ENST00000394241 TRERF1Q96PN7 1200 aa18.66■□□□□ 0.58
TGFA-202ENST00000394241 GAS2L1Q99501 681 aaPredicted RBP18.66■□□□□ 0.58
TGFA-202ENST00000394241 MMP19Q99542 508 aa18.66■□□□□ 0.58
TGFA-202ENST00000394241 AMNQ9BXJ7 453 aa18.66■□□□□ 0.58
TGFA-202ENST00000394241 FAM217BQ9NTX9 383 aaPredicted RBP18.66■□□□□ 0.58
TGFA-202ENST00000394241 ABCB11O95342 1321 aa18.66■□□□□ 0.58
TGFA-202ENST00000394241 SMCHD1A6NHR9 2005 aa18.66■□□□□ 0.58
TGFA-202ENST00000394241 BAZ2BQ9UIF8 2168 aaKnown RBP18.65■□□□□ 0.58
TGFA-202ENST00000394241 PNMA6FA0A0J9YX94 578 aa18.65■□□□□ 0.58
TGFA-202ENST00000394241 KIAA0355O15063 1070 aa18.65■□□□□ 0.58
TGFA-202ENST00000394241 TAL1P17542 331 aaPredicted RBP18.65■□□□□ 0.58
TGFA-202ENST00000394241 ADD1P35611 737 aaKnown RBP18.65■□□□□ 0.58
TGFA-202ENST00000394241 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.65■□□□□ 0.58
TGFA-202ENST00000394241 UHRF1Q96T88 793 aaPredicted RBP18.65■□□□□ 0.58
TGFA-202ENST00000394241 SLKQ9H2G2 1235 aaPredicted RBP18.65■□□□□ 0.58
TGFA-202ENST00000394241 NCOA5Q9HCD5 579 aaKnown RBP18.65■□□□□ 0.58
TGFA-202ENST00000394241 CPLX1O14810 134 aa18.64■□□□□ 0.57
TGFA-202ENST00000394241 HOXD11P31277 338 aaPredicted RBP18.64■□□□□ 0.57
TGFA-202ENST00000394241 MRPS5P82675 430 aaKnown RBP18.64■□□□□ 0.57
TGFA-202ENST00000394241 CPLX2Q6PUV4 134 aaKnown RBP18.64■□□□□ 0.57
TGFA-202ENST00000394241 PHF24Q9UPV7 400 aa18.64■□□□□ 0.57
TGFA-202ENST00000394241 PLXNA1Q9UIW2 1896 aa18.63■□□□□ 0.57
TGFA-202ENST00000394241 PFKFB2O60825 505 aa18.63■□□□□ 0.57
TGFA-202ENST00000394241 PPP1R11O60927 126 aaPredicted RBP18.63■□□□□ 0.57
TGFA-202ENST00000394241 FUT2Q10981 343 aa18.63■□□□□ 0.57
TGFA-202ENST00000394241 MUM1L1Q5H9M0 696 aa18.63■□□□□ 0.57
TGFA-202ENST00000394241 PRAMEF19Q5SWL8 479 aa18.63■□□□□ 0.57
TGFA-202ENST00000394241 ANKRD35Q8N283 1001 aa18.63■□□□□ 0.57
TGFA-202ENST00000394241 LIMCH1Q9UPQ0 1083 aa18.63■□□□□ 0.57
TGFA-202ENST00000394241 MRPL11Q9Y3B7 192 aaKnown RBP18.63■□□□□ 0.57
TGFA-202ENST00000394241 BDP1A6H8Y1 2624 aa18.63■□□□□ 0.57
TGFA-202ENST00000394241 PQBP1O60828 265 aaKnown RBP18.62■□□□□ 0.57
TGFA-202ENST00000394241 IFNAR1P17181 557 aa18.62■□□□□ 0.57
TGFA-202ENST00000394241 SCRN1Q12765 414 aa18.62■□□□□ 0.57
TGFA-202ENST00000394241 ME3Q16798 604 aa18.62■□□□□ 0.57
TGFA-202ENST00000394241 DDX11Q96FC9 970 aa18.62■□□□□ 0.57
TGFA-202ENST00000394241 A1CFQ9NQ94 594 aaKnown RBP18.62■□□□□ 0.57
TGFA-202ENST00000394241 TMEM39AQ9NV64 488 aa18.62■□□□□ 0.57
TGFA-202ENST00000394241 SLC5A4Q9NY91 659 aa18.62■□□□□ 0.57
TGFA-202ENST00000394241 PCDHA1Q9Y5I3 950 aa18.62■□□□□ 0.57
TGFA-202ENST00000394241 hCG_1642624A0A1W2PR95 340 aa18.61■□□□□ 0.57
TGFA-202ENST00000394241 NFIBO00712 420 aa18.61■□□□□ 0.57
TGFA-202ENST00000394241 COBLO75128 1261 aa18.61■□□□□ 0.57
TGFA-202ENST00000394241 CDKL5O76039 1030 aa18.61■□□□□ 0.57
TGFA-202ENST00000394241 LARGE1O95461 756 aa18.61■□□□□ 0.57
TGFA-202ENST00000394241 AKAP17AQ02040 695 aaKnown RBP18.61■□□□□ 0.57
TGFA-202ENST00000394241 NTRK3Q16288 839 aa18.61■□□□□ 0.57
TGFA-202ENST00000394241 NSMFQ6X4W1 530 aa18.61■□□□□ 0.57
TGFA-202ENST00000394241 CLEC4DQ8WXI8 215 aa18.61■□□□□ 0.57
TGFA-202ENST00000394241 GTF3C6Q969F1 213 aa18.61■□□□□ 0.57
TGFA-202ENST00000394241 RNF26Q9BY78 433 aaPredicted RBP18.61■□□□□ 0.57
TGFA-202ENST00000394241 PRDM12Q9H4Q4 367 aa18.61■□□□□ 0.57
TGFA-202ENST00000394241 ZNFX1Q9P2E3 1918 aaKnown RBP18.61■□□□□ 0.57
TGFA-202ENST00000394241 hCG_1984214I3L0E3 225 aa18.6■□□□□ 0.57
TGFA-202ENST00000394241 MCF2L2Q86YR7 1114 aa18.6■□□□□ 0.57
TGFA-202ENST00000394241 TRIM22Q8IYM9 498 aa18.6■□□□□ 0.57
TGFA-202ENST00000394241 ZNF713Q8N859 430 aaPredicted RBP18.6■□□□□ 0.57
TGFA-202ENST00000394241 PHKBQ93100 1093 aa18.6■□□□□ 0.57
TGFA-202ENST00000394241 ZSCAN31Q96LW9 406 aaPredicted RBP18.6■□□□□ 0.57
TGFA-202ENST00000394241 SLC26A6Q9BXS9 759 aa18.6■□□□□ 0.57
TGFA-202ENST00000394241 XPNPEP3Q9NQH7 507 aa18.6■□□□□ 0.57
TGFA-202ENST00000394241 SH2B1Q9NRF2 756 aaPredicted RBP18.6■□□□□ 0.57
TGFA-202ENST00000394241 V9GY48 417 aaPredicted RBP18.6■□□□□ 0.57
TGFA-202ENST00000394241 TCF20Q9UGU0 1960 aaKnown RBP18.59■□□□□ 0.57
TGFA-202ENST00000394241 PTPDC1A2A3K4 754 aa18.59■□□□□ 0.57
TGFA-202ENST00000394241 PRPF3O43395 683 aaKnown RBP18.59■□□□□ 0.57
TGFA-202ENST00000394241 PGK2P07205 417 aa18.59■□□□□ 0.57
TGFA-202ENST00000394241 RARBP10826 455 aa18.59■□□□□ 0.57
TGFA-202ENST00000394241 MCM2P49736 904 aa18.59■□□□□ 0.57
TGFA-202ENST00000394241 HEATR3Q7Z4Q2 680 aa18.59■□□□□ 0.57
TGFA-202ENST00000394241 RNF180Q86T96 592 aa18.59■□□□□ 0.57
TGFA-202ENST00000394241 NECAB1Q8N987 351 aa18.59■□□□□ 0.57
TGFA-202ENST00000394241 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.59■□□□□ 0.57
TGFA-202ENST00000394241 C1QTNF1Q9BXJ1 281 aa18.59■□□□□ 0.57
TGFA-202ENST00000394241 PBX4Q9BYU1 374 aa18.59■□□□□ 0.57
TGFA-202ENST00000394241 MAF1Q9H063 256 aa18.59■□□□□ 0.57
TGFA-202ENST00000394241 CYP39A1Q9NYL5 469 aa18.59■□□□□ 0.57
TGFA-202ENST00000394241 DNAJC25-GNG10A0A024R161 153 aa18.58■□□□□ 0.56
TGFA-202ENST00000394241 A0A1W2PQ45 241 aaPredicted RBP18.58■□□□□ 0.56
TGFA-202ENST00000394241 A0A1W2PQY0 241 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms