RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 CCDC65Q8IXS2 484 aa20.85■□□□□ 0.93
CSPG5-202ENST00000383738 NOC4LQ9BVI4 516 aaKnown RBP20.85■□□□□ 0.93
CSPG5-202ENST00000383738 KIF28PB7ZC32 967 aa20.84■□□□□ 0.93
CSPG5-202ENST00000383738 MYCP01106 439 aaPredicted RBP20.84■□□□□ 0.93
CSPG5-202ENST00000383738 EXOSC10Q01780 885 aaKnown RBP20.84■□□□□ 0.93
CSPG5-202ENST00000383738 DDR1Q08345 913 aa20.84■□□□□ 0.93
CSPG5-202ENST00000383738 C12orf60Q5U649 245 aa20.84■□□□□ 0.93
CSPG5-202ENST00000383738 NYAP1Q6ZVC0 841 aa20.84■□□□□ 0.93
CSPG5-202ENST00000383738 TMTC3Q6ZXV5 915 aa20.84■□□□□ 0.93
CSPG5-202ENST00000383738 E7EVH7 732 aa20.84■□□□□ 0.93
CSPG5-202ENST00000383738 STXBP4Q6ZWJ1 553 aa20.84■□□□□ 0.93
CSPG5-202ENST00000383738 FAM114A1Q8IWE2 563 aa20.84■□□□□ 0.93
CSPG5-202ENST00000383738 SELENOSQ9BQE4 189 aa20.84■□□□□ 0.93
CSPG5-202ENST00000383738 LCMT1Q9UIC8 334 aa20.84■□□□□ 0.93
CSPG5-202ENST00000383738 SLC7A5Q01650 507 aa20.84■□□□□ 0.93
CSPG5-202ENST00000383738 CETN1Q12798 172 aa20.84■□□□□ 0.93
CSPG5-202ENST00000383738 FAM83BQ5T0W9 1011 aa20.84■□□□□ 0.93
CSPG5-202ENST00000383738 C8orf74Q6P047 294 aa20.84■□□□□ 0.93
CSPG5-202ENST00000383738 FMR1NBQ8N0W7 255 aaPredicted RBP20.84■□□□□ 0.93
CSPG5-202ENST00000383738 KIAA1024Q9UPX6 916 aa20.84■□□□□ 0.93
CSPG5-202ENST00000383738 PEX19P40855 299 aa20.83■□□□□ 0.93
CSPG5-202ENST00000383738 EHBP1Q8NDI1 1231 aa20.83■□□□□ 0.93
CSPG5-202ENST00000383738 PCDHB13Q9Y5F0 798 aa20.83■□□□□ 0.93
CSPG5-202ENST00000383738 RGPD8O14715 1765 aaPredicted RBP20.83■□□□□ 0.93
CSPG5-202ENST00000383738 SPAG1Q07617 926 aa20.83■□□□□ 0.93
CSPG5-202ENST00000383738 DCAF15Q66K64 600 aa20.83■□□□□ 0.93
CSPG5-202ENST00000383738 DGKHQ86XP1 1220 aa20.83■□□□□ 0.93
CSPG5-202ENST00000383738 PAF1Q8N7H5 531 aa20.83■□□□□ 0.93
CSPG5-202ENST00000383738 CRAMP1Q96RY5 1269 aa20.83■□□□□ 0.93
CSPG5-202ENST00000383738 CAPS2Q9BXY5 557 aa20.83■□□□□ 0.93
CSPG5-202ENST00000383738 BAIAP2L1Q9UHR4 511 aa20.83■□□□□ 0.93
CSPG5-202ENST00000383738 PP2D1A8MPX8 630 aa20.83■□□□□ 0.92
CSPG5-202ENST00000383738 NOP56O00567 594 aaKnown RBP20.83■□□□□ 0.92
CSPG5-202ENST00000383738 GCNT3O95395 438 aa20.83■□□□□ 0.92
CSPG5-202ENST00000383738 TFRCP02786 760 aaKnown RBP20.83■□□□□ 0.92
CSPG5-202ENST00000383738 CLNS1AP54105 237 aaKnown RBP20.83■□□□□ 0.92
CSPG5-202ENST00000383738 SRLQ86TD4 932 aa20.83■□□□□ 0.92
CSPG5-202ENST00000383738 TMTC1Q8IUR5 882 aa20.83■□□□□ 0.92
CSPG5-202ENST00000383738 NELFBQ8WX92 580 aa20.83■□□□□ 0.92
CSPG5-202ENST00000383738 DHX36Q9H2U1 1008 aaKnown RBP20.83■□□□□ 0.92
CSPG5-202ENST00000383738 TNS2Q63HR2 1409 aa20.83■□□□□ 0.92
CSPG5-202ENST00000383738 SALL3Q9BXA9 1300 aa20.83■□□□□ 0.92
CSPG5-202ENST00000383738 CDC37Q16543 378 aaPredicted RBP20.82■□□□□ 0.92
CSPG5-202ENST00000383738 GPATCH4Q5T3I0 446 aaKnown RBP20.82■□□□□ 0.92
CSPG5-202ENST00000383738 ARHGEF16Q5VV41 709 aa20.82■□□□□ 0.92
CSPG5-202ENST00000383738 NAA15Q9BXJ9 866 aaKnown RBP20.82■□□□□ 0.92
CSPG5-202ENST00000383738 PCDHA4Q9UN74 947 aa20.82■□□□□ 0.92
CSPG5-202ENST00000383738 GCOM1H8Y6P7 765 aaPredicted RBP20.82■□□□□ 0.92
CSPG5-202ENST00000383738 NEBLO76041 1014 aa20.82■□□□□ 0.92
CSPG5-202ENST00000383738 POLR2MP0CAP2 368 aa20.82■□□□□ 0.92
CSPG5-202ENST00000383738 EIF2AK2P19525 551 aaKnown RBP20.82■□□□□ 0.92
CSPG5-202ENST00000383738 CYP27A1Q02318 531 aa20.82■□□□□ 0.92
CSPG5-202ENST00000383738 PAK1Q13153 545 aa20.82■□□□□ 0.92
CSPG5-202ENST00000383738 SRBD1Q8N5C6 995 aaKnown RBP20.82■□□□□ 0.92
CSPG5-202ENST00000383738 TTC16Q8NEE8 873 aa20.82■□□□□ 0.92
CSPG5-202ENST00000383738 FAM71BQ8TC56 605 aa20.82■□□□□ 0.92
CSPG5-202ENST00000383738 UBLCP1Q8WVY7 318 aaPredicted RBP20.82■□□□□ 0.92
CSPG5-202ENST00000383738 WRNIP1Q96S55 665 aa20.82■□□□□ 0.92
CSPG5-202ENST00000383738 TACO1Q9BSH4 297 aaKnown RBP20.82■□□□□ 0.92
CSPG5-202ENST00000383738 FAM207AQ9NSI2 230 aaPredicted RBP20.82■□□□□ 0.92
CSPG5-202ENST00000383738 ZNF446Q9NWS9 450 aa20.82■□□□□ 0.92
CSPG5-202ENST00000383738 ZHX2Q9Y6X8 837 aa20.82■□□□□ 0.92
CSPG5-202ENST00000383738 IGDCC4Q8TDY8 1250 aa20.82■□□□□ 0.92
CSPG5-202ENST00000383738 F5H6K3 240 aa20.82■□□□□ 0.92
CSPG5-202ENST00000383738 TEX33O43247 280 aa20.82■□□□□ 0.92
CSPG5-202ENST00000383738 PCP11498 1178 aaKnown RBP20.82■□□□□ 0.92
CSPG5-202ENST00000383738 KLRC3Q07444 240 aa20.82■□□□□ 0.92
CSPG5-202ENST00000383738 SLC51AQ86UW1 340 aa20.82■□□□□ 0.92
CSPG5-202ENST00000383738 GPBP1Q86WP2 473 aa20.82■□□□□ 0.92
CSPG5-202ENST00000383738 OSBPL5Q9H0X9 879 aaPredicted RBP20.82■□□□□ 0.92
CSPG5-202ENST00000383738 FOXP1Q9H334 677 aaPredicted RBP20.82■□□□□ 0.92
CSPG5-202ENST00000383738 NLRC4Q9NPP4 1024 aa20.82■□□□□ 0.92
CSPG5-202ENST00000383738 KRT13P13646 458 aa20.81■□□□□ 0.92
CSPG5-202ENST00000383738 CDC42EP5Q6NZY7 148 aa20.81■□□□□ 0.92
CSPG5-202ENST00000383738 GLG1Q92896 1179 aa20.81■□□□□ 0.92
CSPG5-202ENST00000383738 MRPL44Q9H9J2 332 aaKnown RBP20.81■□□□□ 0.92
CSPG5-202ENST00000383738 HDAC6Q9UBN7 1215 aa20.81■□□□□ 0.92
CSPG5-202ENST00000383738 HAUS3Q68CZ6 603 aa20.81■□□□□ 0.92
CSPG5-202ENST00000383738 SWAP70Q9UH65 585 aa20.81■□□□□ 0.92
CSPG5-202ENST00000383738 PRPF3O43395 683 aaKnown RBP20.81■□□□□ 0.92
CSPG5-202ENST00000383738 VSNL1P62760 191 aa20.81■□□□□ 0.92
CSPG5-202ENST00000383738 VPS36Q86VN1 386 aa20.81■□□□□ 0.92
CSPG5-202ENST00000383738 CABS1Q96KC9 395 aa20.81■□□□□ 0.92
CSPG5-202ENST00000383738 FLT1P17948 1338 aa20.81■□□□□ 0.92
CSPG5-202ENST00000383738 PDE4DIPQ5VU43 2346 aa20.8■□□□□ 0.92
CSPG5-202ENST00000383738 STAT2P52630 851 aa20.8■□□□□ 0.92
CSPG5-202ENST00000383738 TYW1BQ6NUM6 668 aa20.8■□□□□ 0.92
CSPG5-202ENST00000383738 A0A1W2PQ27 194 aa20.8■□□□□ 0.92
CSPG5-202ENST00000383738 A0A1W2PQ64 194 aa20.8■□□□□ 0.92
CSPG5-202ENST00000383738 A0A1W2PQD8 194 aa20.8■□□□□ 0.92
CSPG5-202ENST00000383738 IFT88Q13099 833 aa20.8■□□□□ 0.92
CSPG5-202ENST00000383738 ASPRV1Q53RT3 343 aa20.8■□□□□ 0.92
CSPG5-202ENST00000383738 TMEM39BQ9GZU3 492 aa20.8■□□□□ 0.92
CSPG5-202ENST00000383738 GRIK5Q16478 980 aa20.8■□□□□ 0.92
CSPG5-202ENST00000383738 FOXP4Q8IVH2 680 aaPredicted RBP20.8■□□□□ 0.92
CSPG5-202ENST00000383738 TBC1D31Q96DN5 1066 aa20.8■□□□□ 0.92
CSPG5-202ENST00000383738 PSMD14O00487 310 aa20.79■□□□□ 0.92
CSPG5-202ENST00000383738 RASA3Q14644 834 aa20.79■□□□□ 0.92
CSPG5-202ENST00000383738 RASGRP2Q7LDG7 609 aa20.79■□□□□ 0.92
CSPG5-202ENST00000383738 EFCC1Q9HA90 598 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms