RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 CTCFLQ8NI51 663 aaPredicted RBP13.4□□□□□ -0.26
APOBEC3F-202ENST00000381565 JAKMIP1Q96N16 626 aaKnown RBP13.4□□□□□ -0.26
APOBEC3F-202ENST00000381565 USP26Q9BXU7 913 aa13.4□□□□□ -0.26
APOBEC3F-202ENST00000381565 SENP6Q9GZR1 1112 aaPredicted RBP13.4□□□□□ -0.26
APOBEC3F-202ENST00000381565 XPNPEP3Q9NQH7 507 aa13.4□□□□□ -0.26
APOBEC3F-202ENST00000381565 ADD3Q9UEY8 706 aaKnown RBP13.4□□□□□ -0.26
APOBEC3F-202ENST00000381565 SCN10AQ9Y5Y9 1956 aa13.4□□□□□ -0.27
APOBEC3F-202ENST00000381565 LOC102724159A0A0B4J2E5 919 aa13.39□□□□□ -0.27
APOBEC3F-202ENST00000381565 HAX1O00165 279 aa13.39□□□□□ -0.27
APOBEC3F-202ENST00000381565 ATN1P54259 1190 aaPredicted RBP13.39□□□□□ -0.27
APOBEC3F-202ENST00000381565 PWP2Q15269 919 aaKnown RBP13.39□□□□□ -0.27
APOBEC3F-202ENST00000381565 TMEM63BQ5T3F8 832 aa13.39□□□□□ -0.27
APOBEC3F-202ENST00000381565 TAPT1Q6NXT6 567 aa13.39□□□□□ -0.27
APOBEC3F-202ENST00000381565 TMTC3Q6ZXV5 915 aa13.39□□□□□ -0.27
APOBEC3F-202ENST00000381565 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.39□□□□□ -0.27
APOBEC3F-202ENST00000381565 CMTR1Q8N1G2 835 aaKnown RBP13.39□□□□□ -0.27
APOBEC3F-202ENST00000381565 SYTL5Q8TDW5 730 aaPredicted RBP13.39□□□□□ -0.27
APOBEC3F-202ENST00000381565 PHF12Q96QT6 1004 aa13.39□□□□□ -0.27
APOBEC3F-202ENST00000381565 MAF1Q9H063 256 aa13.39□□□□□ -0.27
APOBEC3F-202ENST00000381565 PDGFCQ9NRA1 345 aa13.39□□□□□ -0.27
APOBEC3F-202ENST00000381565 FAM184BQ9ULE4 1060 aa13.39□□□□□ -0.27
APOBEC3F-202ENST00000381565 SLC12A7Q9Y666 1083 aa13.39□□□□□ -0.27
APOBEC3F-202ENST00000381565 CNTNAP5Q8WYK1 1306 aa13.39□□□□□ -0.27
APOBEC3F-202ENST00000381565 NID2Q14112 1375 aa13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 PNMA6FA0A0J9YX94 578 aa13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 RIOK3O14730 519 aaKnown RBP13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 CTAGE5O15320 804 aa13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 DUSP11O75319 330 aaKnown RBP13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 CALM1P0DP23 149 aa13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 CALM2P0DP24 149 aa13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 CALM3P0DP25 149 aa13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 SMARCA1P28370 1054 aa13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 KIF5BP33176 963 aa13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 ADCYAP1R1P41586 468 aa13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 HSD17B4P51659 736 aa13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 RTP1P59025 263 aa13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 CCSAPQ6IQ19 270 aaPredicted RBP13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 EEPD1Q7L9B9 569 aa13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 ARRDC4Q8NCT1 418 aa13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 DNERQ8NFT8 737 aa13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 PIBF1Q8WXW3 757 aa13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 FAM161BQ96MY7 647 aa13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 TAAR1Q96RJ0 339 aa13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 UPF3AQ9H1J1 476 aaKnown RBP13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 VTA1Q9NP79 307 aa13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 GNEQ9Y223 722 aaKnown RBP13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 MRPL11Q9Y3B7 192 aaKnown RBP13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 PCDHA1Q9Y5I3 950 aa13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 MUC3AQ02505 3323 aa13.38□□□□□ -0.27
APOBEC3F-202ENST00000381565 KBTBD13C9JR72 458 aa13.37□□□□□ -0.27
APOBEC3F-202ENST00000381565 HMGB1P09429 215 aaKnown RBP13.37□□□□□ -0.27
APOBEC3F-202ENST00000381565 SMPD1P17405 629 aa13.37□□□□□ -0.27
APOBEC3F-202ENST00000381565 CASTP20810 708 aaKnown RBP13.37□□□□□ -0.27
APOBEC3F-202ENST00000381565 RPS6KB1P23443 525 aa13.37□□□□□ -0.27
APOBEC3F-202ENST00000381565 CST5P28325 142 aaPredicted RBP13.37□□□□□ -0.27
APOBEC3F-202ENST00000381565 FUT2Q10981 343 aa13.37□□□□□ -0.27
APOBEC3F-202ENST00000381565 BLOC1S2Q6QNY1 142 aa13.37□□□□□ -0.27
APOBEC3F-202ENST00000381565 Q6ZUG5 572 aa13.37□□□□□ -0.27
APOBEC3F-202ENST00000381565 FANCBQ8NB91 859 aa13.37□□□□□ -0.27
APOBEC3F-202ENST00000381565 KLHDC9Q8NEP7 349 aa13.37□□□□□ -0.27
APOBEC3F-202ENST00000381565 AGXT2Q9BYV1 514 aa13.37□□□□□ -0.27
APOBEC3F-202ENST00000381565 FAM217BQ9NTX9 383 aaPredicted RBP13.37□□□□□ -0.27
APOBEC3F-202ENST00000381565 PHF24Q9UPV7 400 aa13.37□□□□□ -0.27
APOBEC3F-202ENST00000381565 KLF18A0A0U1RQI7 1052 aa13.36□□□□□ -0.27
APOBEC3F-202ENST00000381565 RBM47A0AV96 593 aaKnown RBP13.36□□□□□ -0.27
APOBEC3F-202ENST00000381565 MAP3K13O43283 966 aa13.36□□□□□ -0.27
APOBEC3F-202ENST00000381565 CFBP00751 764 aa13.36□□□□□ -0.27
APOBEC3F-202ENST00000381565 CDC27P30260 824 aa13.36□□□□□ -0.27
APOBEC3F-202ENST00000381565 GJA9P57773 515 aa13.36□□□□□ -0.27
APOBEC3F-202ENST00000381565 NKX3-2P78367 333 aa13.36□□□□□ -0.27
APOBEC3F-202ENST00000381565 APOBRQ0VD83 1088 aa13.36□□□□□ -0.27
APOBEC3F-202ENST00000381565 SNX17Q15036 470 aa13.36□□□□□ -0.27
APOBEC3F-202ENST00000381565 C9orf50Q5SZB4 431 aa13.36□□□□□ -0.27
APOBEC3F-202ENST00000381565 RNF180Q86T96 592 aa13.36□□□□□ -0.27
APOBEC3F-202ENST00000381565 MCF2L2Q86YR7 1114 aa13.36□□□□□ -0.27
APOBEC3F-202ENST00000381565 FBXL16Q8N461 479 aa13.36□□□□□ -0.27
APOBEC3F-202ENST00000381565 BRF1Q92994 677 aa13.36□□□□□ -0.27
APOBEC3F-202ENST00000381565 RRP36Q96EU6 259 aaKnown RBP13.36□□□□□ -0.27
APOBEC3F-202ENST00000381565 LZTS2Q9BRK4 669 aa13.36□□□□□ -0.27
APOBEC3F-202ENST00000381565 A0A1W2PQ45 241 aaPredicted RBP13.35□□□□□ -0.27
APOBEC3F-202ENST00000381565 A0A1W2PQY0 241 aa13.35□□□□□ -0.27
APOBEC3F-202ENST00000381565 hCG_1642624A0A1W2PR95 340 aa13.35□□□□□ -0.27
APOBEC3F-202ENST00000381565 ZBTB43O43298 467 aa13.35□□□□□ -0.27
APOBEC3F-202ENST00000381565 HOXA13P31271 388 aaPredicted RBP13.35□□□□□ -0.27
APOBEC3F-202ENST00000381565 GNAQP50148 359 aa13.35□□□□□ -0.27
APOBEC3F-202ENST00000381565 RCAN1P53805 252 aa13.35□□□□□ -0.27
APOBEC3F-202ENST00000381565 TNFAIP2Q03169 654 aa13.35□□□□□ -0.27
APOBEC3F-202ENST00000381565 PDE4DQ08499 809 aa13.35□□□□□ -0.27
APOBEC3F-202ENST00000381565 SHHQ15465 462 aa13.35□□□□□ -0.27
APOBEC3F-202ENST00000381565 RTN1Q16799 776 aa13.35□□□□□ -0.27
APOBEC3F-202ENST00000381565 TLK2Q86UE8 772 aa13.35□□□□□ -0.27
APOBEC3F-202ENST00000381565 IL31RAQ8NI17 732 aa13.35□□□□□ -0.27
APOBEC3F-202ENST00000381565 FERMT2Q96AC1 680 aa13.35□□□□□ -0.27
APOBEC3F-202ENST00000381565 RMDN3Q96TC7 470 aa13.35□□□□□ -0.27
APOBEC3F-202ENST00000381565 LBHD1Q9BQE6 289 aaPredicted RBP13.35□□□□□ -0.27
APOBEC3F-202ENST00000381565 ZSWIM6Q9HCJ5 1215 aa13.35□□□□□ -0.27
APOBEC3F-202ENST00000381565 PXMP2Q9NR77 195 aa13.35□□□□□ -0.27
APOBEC3F-202ENST00000381565 ATP11BQ9Y2G3 1177 aa13.35□□□□□ -0.27
APOBEC3F-202ENST00000381565 FRMPD4Q14CM0 1322 aa13.35□□□□□ -0.27
APOBEC3F-202ENST00000381565 WDR81Q562E7 1941 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms