RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 CCDC170Q8IYT3 715 aa17.5■□□□□ 0.39
COL2A1-202ENST00000380518 ATP6V0A1Q93050 837 aa17.5■□□□□ 0.39
COL2A1-202ENST00000380518 MAGOHBQ96A72 148 aaKnown RBP17.5■□□□□ 0.39
COL2A1-202ENST00000380518 MED10Q9BTT4 135 aa17.5■□□□□ 0.39
COL2A1-202ENST00000380518 FAM114A2Q9NRY5 505 aa17.5■□□□□ 0.39
COL2A1-202ENST00000380518 CD2APQ9Y5K6 639 aa17.5■□□□□ 0.39
COL2A1-202ENST00000380518 ENC1O14682 589 aa17.5■□□□□ 0.39
COL2A1-202ENST00000380518 AFPP02771 609 aaKnown RBP17.5■□□□□ 0.39
COL2A1-202ENST00000380518 MESDQ14696 234 aa17.5■□□□□ 0.39
COL2A1-202ENST00000380518 PPP2R5AQ15172 486 aa17.5■□□□□ 0.39
COL2A1-202ENST00000380518 CAPN12Q6ZSI9 719 aa17.5■□□□□ 0.39
COL2A1-202ENST00000380518 OSBP2Q969R2 916 aa17.5■□□□□ 0.39
COL2A1-202ENST00000380518 MAN1B1Q9UKM7 699 aa17.5■□□□□ 0.39
COL2A1-202ENST00000380518 PHLPP2Q6ZVD8 1323 aa17.5■□□□□ 0.39
COL2A1-202ENST00000380518 ARHGAP4P98171 946 aa17.5■□□□□ 0.39
COL2A1-202ENST00000380518 FAM186BQ8IYM0 893 aa17.5■□□□□ 0.39
COL2A1-202ENST00000380518 SMYD4Q8IYR2 804 aaPredicted RBP17.5■□□□□ 0.39
COL2A1-202ENST00000380518 WDR11Q9BZH6 1224 aa17.5■□□□□ 0.39
COL2A1-202ENST00000380518 USH1CQ9Y6N9 552 aa17.5■□□□□ 0.39
COL2A1-202ENST00000380518 NR5A1Q13285 461 aa17.5■□□□□ 0.39
COL2A1-202ENST00000380518 TBCKQ8TEA7 893 aa17.5■□□□□ 0.39
COL2A1-202ENST00000380518 TRIM11Q96F44 468 aa17.5■□□□□ 0.39
COL2A1-202ENST00000380518 LIFRP42702 1097 aa17.49■□□□□ 0.39
COL2A1-202ENST00000380518 DYNLL1P63167 89 aaKnown RBP17.49■□□□□ 0.39
COL2A1-202ENST00000380518 PTPN12Q05209 780 aaKnown RBP17.49■□□□□ 0.39
COL2A1-202ENST00000380518 TMC4Q7Z404 712 aa17.49■□□□□ 0.39
COL2A1-202ENST00000380518 ARHGAP42A6NI28 874 aa17.49■□□□□ 0.39
COL2A1-202ENST00000380518 KIF3CO14782 793 aa17.49■□□□□ 0.39
COL2A1-202ENST00000380518 SH2D4BQ5SQS7 431 aa17.49■□□□□ 0.39
COL2A1-202ENST00000380518 FAM160B1Q5W0V3 765 aa17.49■□□□□ 0.39
COL2A1-202ENST00000380518 FTOQ9C0B1 505 aaKnown RBP eCLIP17.49■□□□□ 0.39
COL2A1-202ENST00000380518 GCC2Q8IWJ2 1684 aa17.49■□□□□ 0.39
COL2A1-202ENST00000380518 COBLO75128 1261 aa17.49■□□□□ 0.39
COL2A1-202ENST00000380518 PIK3CAP42336 1068 aa17.49■□□□□ 0.39
COL2A1-202ENST00000380518 EPHB4P54760 987 aa17.49■□□□□ 0.39
COL2A1-202ENST00000380518 KANSL2Q9H9L4 492 aa17.49■□□□□ 0.39
COL2A1-202ENST00000380518 ANKFY1Q9P2R3 1169 aa17.49■□□□□ 0.39
COL2A1-202ENST00000380518 RNF14Q9UBS8 474 aa17.49■□□□□ 0.39
COL2A1-202ENST00000380518 CEP120Q8N960 986 aa17.49■□□□□ 0.39
COL2A1-202ENST00000380518 RWDD2AQ9UIY3 292 aa17.49■□□□□ 0.39
COL2A1-202ENST00000380518 HOXA7P31268 230 aaPredicted RBP17.48■□□□□ 0.39
COL2A1-202ENST00000380518 TACO1Q9BSH4 297 aaKnown RBP17.48■□□□□ 0.39
COL2A1-202ENST00000380518 PUS7LQ9H0K6 701 aaKnown RBP17.48■□□□□ 0.39
COL2A1-202ENST00000380518 SERPINB13Q9UIV8 391 aa17.48■□□□□ 0.39
COL2A1-202ENST00000380518 ABCA5Q8WWZ7 1642 aa17.48■□□□□ 0.39
COL2A1-202ENST00000380518 METP08581 1390 aa17.48■□□□□ 0.39
COL2A1-202ENST00000380518 PRPF3O43395 683 aaKnown RBP17.48■□□□□ 0.39
COL2A1-202ENST00000380518 ZNF577Q9BSK1 485 aa17.48■□□□□ 0.39
COL2A1-202ENST00000380518 SRPRBQ9Y5M8 271 aaKnown RBP17.48■□□□□ 0.39
COL2A1-202ENST00000380518 ARHGEF5Q12774 1597 aa17.48■□□□□ 0.39
COL2A1-202ENST00000380518 RINT1Q6NUQ1 792 aa17.48■□□□□ 0.39
COL2A1-202ENST00000380518 LCORLQ8N3X6 602 aa17.48■□□□□ 0.39
COL2A1-202ENST00000380518 DAAM1Q9Y4D1 1078 aa17.48■□□□□ 0.39
COL2A1-202ENST00000380518 CCNE1P24864 410 aa17.48■□□□□ 0.39
COL2A1-202ENST00000380518 BAG6P46379 1132 aa17.48■□□□□ 0.39
COL2A1-202ENST00000380518 ZBED6P86452 979 aa17.48■□□□□ 0.39
COL2A1-202ENST00000380518 RESTQ13127 1097 aa17.48■□□□□ 0.39
COL2A1-202ENST00000380518 MUM1Q2TAK8 710 aa17.48■□□□□ 0.39
COL2A1-202ENST00000380518 KAZNQ674X7 775 aa17.48■□□□□ 0.39
COL2A1-202ENST00000380518 LRRC8CQ8TDW0 803 aa17.48■□□□□ 0.39
COL2A1-202ENST00000380518 CDKL2Q92772 493 aa17.48■□□□□ 0.39
COL2A1-202ENST00000380518 SEC31BQ9NQW1 1179 aa17.48■□□□□ 0.39
COL2A1-202ENST00000380518 PRKAB2O43741 272 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 SIRT2Q8IXJ6 389 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 ZSWIM5Q9P217 1185 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 PGRMC1O00264 195 aaKnown RBP17.47■□□□□ 0.39
COL2A1-202ENST00000380518 HEXIM1O94992 359 aaKnown RBP17.47■□□□□ 0.39
COL2A1-202ENST00000380518 NECTIN1Q15223 517 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 LRRC41Q15345 812 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 NLRP10Q86W26 655 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 GRAMD1CQ8IYS0 662 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 RNF169Q8NCN4 708 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 FAM81BQ96LP2 452 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 SYNMO15061 1565 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 H7C0C1 242 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 ATP5OP48047 213 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 PI16Q6UXB8 463 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 SLC7A3Q8WY07 619 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 NACC1Q96RE7 527 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 CSRNP1Q96S65 589 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 ANO3Q9BYT9 981 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 INTS9Q9NV88 658 aaKnown RBP17.47■□□□□ 0.39
COL2A1-202ENST00000380518 SORBS3O60504 671 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 GOLGA8FQ08AF8 430 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 GOLGA8DPQ0D2H9 430 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 TFDP1Q14186 410 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 FAM47CQ5HY64 1035 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 VSTM4Q8IW00 320 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 ACCSQ96QU6 501 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 HINFPQ9BQA5 517 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 VCX3AQ9NNX9 186 aa17.47■□□□□ 0.39
COL2A1-202ENST00000380518 KCTD16Q68DU8 428 aa17.46■□□□□ 0.39
COL2A1-202ENST00000380518 SPICE1Q8N0Z3 855 aa17.46■□□□□ 0.39
COL2A1-202ENST00000380518 PIGSQ96S52 555 aa17.46■□□□□ 0.39
COL2A1-202ENST00000380518 BCS1LQ9Y276 419 aa17.46■□□□□ 0.39
COL2A1-202ENST00000380518 USP6P35125 1406 aa17.46■□□□□ 0.39
COL2A1-202ENST00000380518 PRAMEF22A3QJZ6 481 aa17.46■□□□□ 0.39
COL2A1-202ENST00000380518 BBOX1O75936 387 aa17.46■□□□□ 0.39
COL2A1-202ENST00000380518 SUN1O94901 812 aa17.46■□□□□ 0.39
COL2A1-202ENST00000380518 LIG3P49916 1009 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms