RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 RMDN3Q96TC7 470 aa13.69□□□□□ -0.22
PCNA-201ENST00000379143 ZMYND12Q9H0C1 365 aa13.69□□□□□ -0.22
PCNA-201ENST00000379143 C6orf50Q9HD87 102 aa13.69□□□□□ -0.22
PCNA-201ENST00000379143 RIC8AQ9NPQ8 531 aa13.69□□□□□ -0.22
PCNA-201ENST00000379143 ORC3Q9UBD5 711 aaPredicted RBP13.69□□□□□ -0.22
PCNA-201ENST00000379143 CNPY2Q9Y2B0 182 aa13.69□□□□□ -0.22
PCNA-201ENST00000379143 RPTORQ8N122 1335 aa13.69□□□□□ -0.22
PCNA-201ENST00000379143 MEIS2O14770 477 aa13.68□□□□□ -0.22
PCNA-201ENST00000379143 PPFIA3O75145 1194 aa13.68□□□□□ -0.22
PCNA-201ENST00000379143 CD2BP2O95400 341 aaKnown RBP13.68□□□□□ -0.22
PCNA-201ENST00000379143 HOXA13P31271 388 aaPredicted RBP13.68□□□□□ -0.22
PCNA-201ENST00000379143 CYP2C19P33261 490 aa13.68□□□□□ -0.22
PCNA-201ENST00000379143 HABP4Q5JVS0 413 aaKnown RBP13.68□□□□□ -0.22
PCNA-201ENST00000379143 MAP3K21Q5TCX8 1036 aa13.68□□□□□ -0.22
PCNA-201ENST00000379143 ARHGEF16Q5VV41 709 aa13.68□□□□□ -0.22
PCNA-201ENST00000379143 TYW1BQ6NUM6 668 aa13.68□□□□□ -0.22
PCNA-201ENST00000379143 MORC4Q8TE76 937 aa13.68□□□□□ -0.22
PCNA-201ENST00000379143 ZNF333Q96JL9 665 aa13.68□□□□□ -0.22
PCNA-201ENST00000379143 FGD4Q96M96 766 aa13.68□□□□□ -0.22
PCNA-201ENST00000379143 IWS1Q96ST2 819 aa13.68□□□□□ -0.22
PCNA-201ENST00000379143 ABHD16BQ9H3Z7 469 aa13.68□□□□□ -0.22
PCNA-201ENST00000379143 HMX1Q9NP08 348 aaPredicted RBP13.68□□□□□ -0.22
PCNA-201ENST00000379143 LCTP09848 1927 aa13.68□□□□□ -0.22
PCNA-201ENST00000379143 SPDYE3A6NKU9 549 aa13.67□□□□□ -0.22
PCNA-201ENST00000379143 FOSP01100 380 aaPredicted RBP13.67□□□□□ -0.22
PCNA-201ENST00000379143 PRKAR2AP13861 404 aaKnown RBP13.67□□□□□ -0.22
PCNA-201ENST00000379143 NLRP5P59047 1200 aa13.67□□□□□ -0.22
PCNA-201ENST00000379143 CACNB2Q08289 660 aaPredicted RBP13.67□□□□□ -0.22
PCNA-201ENST00000379143 ST3GAL1Q11201 340 aa13.67□□□□□ -0.22
PCNA-201ENST00000379143 GALNT17Q6IS24 598 aa13.67□□□□□ -0.22
PCNA-201ENST00000379143 USP17L6PQ6QN14 398 aa13.67□□□□□ -0.22
PCNA-201ENST00000379143 ARMCX2Q7L311 632 aa13.67□□□□□ -0.22
PCNA-201ENST00000379143 FCHSD1Q86WN1 690 aa13.67□□□□□ -0.22
PCNA-201ENST00000379143 SNX21Q969T3 373 aa13.67□□□□□ -0.22
PCNA-201ENST00000379143 TAAR1Q96RJ0 339 aa13.67□□□□□ -0.22
PCNA-201ENST00000379143 EHMT1Q9H9B1 1298 aa13.67□□□□□ -0.22
PCNA-201ENST00000379143 PXMP2Q9NR77 195 aa13.67□□□□□ -0.22
PCNA-201ENST00000379143 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.67□□□□□ -0.22
PCNA-201ENST00000379143 VPS54Q9P1Q0 977 aa13.67□□□□□ -0.22
PCNA-201ENST00000379143 COL20A1Q9P218 1284 aa13.67□□□□□ -0.22
PCNA-201ENST00000379143 KIF3AQ9Y496 699 aa13.67□□□□□ -0.22
PCNA-201ENST00000379143 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.67□□□□□ -0.22
PCNA-201ENST00000379143 ASTN1O14525 1302 aa13.67□□□□□ -0.22
PCNA-201ENST00000379143 MSCO60682 206 aa13.66□□□□□ -0.22
PCNA-201ENST00000379143 CAPN2P17655 700 aa13.66□□□□□ -0.22
PCNA-201ENST00000379143 EDNRBP24530 442 aa13.66□□□□□ -0.22
PCNA-201ENST00000379143 PDE4DQ08499 809 aa13.66□□□□□ -0.22
PCNA-201ENST00000379143 AP3B2Q13367 1082 aa13.66□□□□□ -0.22
PCNA-201ENST00000379143 TRIM29Q14134 588 aa13.66□□□□□ -0.22
PCNA-201ENST00000379143 FAM184AQ8NB25 1140 aa13.66□□□□□ -0.22
PCNA-201ENST00000379143 PURBQ96QR8 312 aaKnown RBP13.66□□□□□ -0.22
PCNA-201ENST00000379143 ALG1Q9BT22 464 aa13.66□□□□□ -0.22
PCNA-201ENST00000379143 FRMPD4Q14CM0 1322 aa13.66□□□□□ -0.22
PCNA-201ENST00000379143 K7ELQ4 463 aaPredicted RBP13.65□□□□□ -0.22
PCNA-201ENST00000379143 JAK2O60674 1132 aa13.65□□□□□ -0.22
PCNA-201ENST00000379143 STAM2O75886 525 aa13.65□□□□□ -0.22
PCNA-201ENST00000379143 SNAI1O95863 264 aaPredicted RBP13.65□□□□□ -0.22
PCNA-201ENST00000379143 CYBAP13498 195 aa13.65□□□□□ -0.22
PCNA-201ENST00000379143 CCL5P13501 91 aa13.65□□□□□ -0.22
PCNA-201ENST00000379143 FDPSP14324 419 aaKnown RBP13.65□□□□□ -0.22
PCNA-201ENST00000379143 EIF2AK2P19525 551 aaKnown RBP13.65□□□□□ -0.22
PCNA-201ENST00000379143 CLK2P49760 499 aaKnown RBP13.65□□□□□ -0.22
PCNA-201ENST00000379143 TRIM32Q13049 653 aa13.65□□□□□ -0.22
PCNA-201ENST00000379143 ACVR2BQ13705 512 aa13.65□□□□□ -0.22
PCNA-201ENST00000379143 STXBP2Q15833 593 aa13.65□□□□□ -0.22
PCNA-201ENST00000379143 XRRA1Q6P2D8 792 aa13.65□□□□□ -0.22
PCNA-201ENST00000379143 HSCBQ8IWL3 235 aa13.65□□□□□ -0.22
PCNA-201ENST00000379143 REXO1Q8N1G1 1221 aaKnown RBP13.65□□□□□ -0.22
PCNA-201ENST00000379143 PDCD2LQ9BRP1 358 aa13.65□□□□□ -0.22
PCNA-201ENST00000379143 TMEM106CQ9BVX2 250 aa13.65□□□□□ -0.22
PCNA-201ENST00000379143 RNF208Q9H0X6 261 aa13.65□□□□□ -0.22
PCNA-201ENST00000379143 VTA1Q9NP79 307 aa13.65□□□□□ -0.22
PCNA-201ENST00000379143 POTEFA5A3E0 1075 aa13.64□□□□□ -0.23
PCNA-201ENST00000379143 SEPT4O43236 478 aa13.64□□□□□ -0.23
PCNA-201ENST00000379143 EIF3JO75822 258 aaKnown RBP13.64□□□□□ -0.23
PCNA-201ENST00000379143 NR3C2P08235 984 aa13.64□□□□□ -0.23
PCNA-201ENST00000379143 AKR1A1P14550 325 aa13.64□□□□□ -0.23
PCNA-201ENST00000379143 CNGA1P29973 690 aa13.64□□□□□ -0.23
PCNA-201ENST00000379143 CCND2P30279 289 aa13.64□□□□□ -0.23
PCNA-201ENST00000379143 CUL4AQ13619 759 aa13.64□□□□□ -0.23
PCNA-201ENST00000379143 PGM5Q15124 567 aa13.64□□□□□ -0.23
PCNA-201ENST00000379143 UBE2SQ16763 222 aa13.64□□□□□ -0.23
PCNA-201ENST00000379143 DAGLBQ8NCG7 672 aa13.64□□□□□ -0.23
PCNA-201ENST00000379143 PHF20Q9BVI0 1012 aa13.64□□□□□ -0.23
PCNA-201ENST00000379143 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.64□□□□□ -0.23
PCNA-201ENST00000379143 BRMS1Q9HCU9 246 aa13.64□□□□□ -0.23
PCNA-201ENST00000379143 PAK6Q9NQU5 681 aaPredicted RBP13.64□□□□□ -0.23
PCNA-201ENST00000379143 PCDHA6Q9UN73 950 aa13.64□□□□□ -0.23
PCNA-201ENST00000379143 PCDHA4Q9UN74 947 aa13.64□□□□□ -0.23
PCNA-201ENST00000379143 PCDHA8Q9Y5H6 950 aa13.64□□□□□ -0.23
PCNA-201ENST00000379143 KIAA0100Q14667 2235 aaKnown RBP13.64□□□□□ -0.23
PCNA-201ENST00000379143 GJB1P08034 283 aa13.64□□□□□ -0.23
PCNA-201ENST00000379143 ZNF865P0CJ78 1059 aaPredicted RBP13.64□□□□□ -0.23
PCNA-201ENST00000379143 MTFR1Q15390 333 aa13.64□□□□□ -0.23
PCNA-201ENST00000379143 VSIG10LQ86VR7 867 aa13.64□□□□□ -0.23
PCNA-201ENST00000379143 BLIDQ8IZY5 108 aa13.64□□□□□ -0.23
PCNA-201ENST00000379143 AIFM3Q96NN9 605 aa13.64□□□□□ -0.23
PCNA-201ENST00000379143 KATNBL1Q9H079 304 aa13.64□□□□□ -0.23
PCNA-201ENST00000379143 UNC93B1Q9H1C4 597 aa13.64□□□□□ -0.23
PCNA-201ENST00000379143 ZHX1Q9UKY1 873 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms