RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 DUSP9Q99956 384 aaKnown RBP9.08□□□□□ -0.96
PTPRR-203ENST00000378778 NOC4LQ9BVI4 516 aaKnown RBP9.08□□□□□ -0.96
PTPRR-203ENST00000378778 LRRC27Q9C0I9 530 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 BLZF1Q9H2G9 400 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 KDM4CQ9H3R0 1056 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 LRWD1Q9UFC0 647 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 LAMB1P07942 1786 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 CNTNAP5Q8WYK1 1306 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 DCCP43146 1447 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 GMNCA6NCL1 334 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 B4DLN1 442 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 BHMG1C9JSJ3 638 aaPredicted RBP9.08□□□□□ -0.96
PTPRR-203ENST00000378778 ANKRD65E5RJM6 399 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 ZNF185O15231 689 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 ORC4O43929 436 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 XRCC4Q13426 336 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 MAN2A1Q16706 1144 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 SAMD1Q6SPF0 538 aaPredicted RBP9.08□□□□□ -0.96
PTPRR-203ENST00000378778 PI16Q6UXB8 463 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 CRELD2Q6UXH1 353 aaPredicted RBP9.08□□□□□ -0.96
PTPRR-203ENST00000378778 RNPC3Q96LT9 517 aaKnown RBP9.08□□□□□ -0.96
PTPRR-203ENST00000378778 CCDC43Q96MW1 224 aaKnown RBP9.08□□□□□ -0.96
PTPRR-203ENST00000378778 ISCUQ9H1K1 167 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 GDAQ9Y2T3 454 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 MACROD2A1Z1Q3 448 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 ZNF233A6NK53 670 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 RASSF10A6NK89 507 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 UBE2Q2LH0YL09 131 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 AKR1B10O60218 316 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 ZMYND10O75800 440 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 GNAQP50148 359 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 LRRC63Q05C16 580 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 TROAPQ12815 778 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 PARP9Q8IXQ6 854 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 GSPT2Q8IYD1 628 aaKnown RBP9.07□□□□□ -0.96
PTPRR-203ENST00000378778 BANK1Q8NDB2 785 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 RRP36Q96EU6 259 aaKnown RBP9.07□□□□□ -0.96
PTPRR-203ENST00000378778 PBKQ96KB5 322 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 ARMT1Q9H993 441 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 SLC40A1Q9NP59 571 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 AGPAT5Q9NUQ2 364 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 SIK3Q9Y2K2 1263 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 SAMM50Q9Y512 469 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 TACC3Q9Y6A5 838 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 V9GY48 417 aaPredicted RBP9.07□□□□□ -0.96
PTPRR-203ENST00000378778 PVALEFA0A1B0GWK0 134 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 GCOM1H8Y6P7 765 aaPredicted RBP9.07□□□□□ -0.96
PTPRR-203ENST00000378778 MYZAPP0CAP1 466 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 CASP1P29466 404 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 UBA7P41226 1012 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 PHKA1P46020 1223 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 EIF3BP55884 814 aaKnown RBP9.07□□□□□ -0.96
PTPRR-203ENST00000378778 NLRP5P59047 1200 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 SATB1Q01826 763 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 RIPK1Q13546 671 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 CLUL1Q15846 466 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 PPP2R5EQ16537 467 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 ASTE1Q2TB18 679 aaPredicted RBP9.07□□□□□ -0.96
PTPRR-203ENST00000378778 VWA3BQ502W6 1294 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 MIIPQ5JXC2 388 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 ENAHQ8N8S7 591 aaPredicted RBP9.07□□□□□ -0.96
PTPRR-203ENST00000378778 CCDC114Q96M63 670 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 JPH2Q9BR39 696 aaPredicted RBP9.07□□□□□ -0.96
PTPRR-203ENST00000378778 TLR10Q9BXR5 811 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 TAF1DQ9H5J8 278 aaPredicted RBP9.07□□□□□ -0.96
PTPRR-203ENST00000378778 ODF2LQ9ULJ1 636 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 LAMB2P55268 1798 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 KIF13BQ9NQT8 1826 aa9.07□□□□□ -0.96
PTPRR-203ENST00000378778 CCDC188H7C350 402 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 ZNF263O14978 683 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 TRAPPC3O43617 180 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 HEXIM1O94992 359 aaKnown RBP9.06□□□□□ -0.96
PTPRR-203ENST00000378778 A1BGP04217 495 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 PSMD2Q13200 908 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 EARS2Q5JPH6 523 aaKnown RBP9.06□□□□□ -0.96
PTPRR-203ENST00000378778 RRP12Q5JTH9 1297 aaKnown RBP9.06□□□□□ -0.96
PTPRR-203ENST00000378778 CENPPQ6IPU0 288 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 RCSD1Q6JBY9 416 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 TEX11Q8IYF3 940 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 BLIDQ8IZY5 108 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 MIEF2Q96C03 454 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 SHISA4Q96DD7 197 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 HOOK2Q96ED9 719 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 CYFIP2Q96F07 1278 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 PCMTD1Q96MG8 357 aaPredicted RBP9.06□□□□□ -0.96
PTPRR-203ENST00000378778 TMEM59LQ9UK28 342 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 PCDHA4Q9UN74 947 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 PCDHGC5Q9Y5F6 944 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 CAPN6Q9Y6Q1 641 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 CASZ1Q86V15 1759 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 FAM205CA6NFA0 338 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 MYO1FO00160 1098 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 PES1O00541 588 aaKnown RBP9.06□□□□□ -0.96
PTPRR-203ENST00000378778 CSB-PGBD3P0DP91 1061 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 EIF4A3P38919 411 aaKnown RBP9.06□□□□□ -0.96
PTPRR-203ENST00000378778 CEBPAP49715 358 aaPredicted RBP9.06□□□□□ -0.96
PTPRR-203ENST00000378778 NAB2Q15742 525 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 NAALADL2Q58DX5 795 aa9.06□□□□□ -0.96
PTPRR-203ENST00000378778 RNF187Q5TA31 235 aaPredicted RBP9.06□□□□□ -0.96
PTPRR-203ENST00000378778 KLHDC7AQ5VTJ3 777 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms