RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 JAKMIP3Q5VZ66 844 aa13.46□□□□□ -0.26
DEPDC4-202ENST00000378244 TRMT44Q8IYL2 757 aaKnown RBP13.46□□□□□ -0.26
DEPDC4-202ENST00000378244 NSUN6Q8TEA1 469 aaKnown RBP13.46□□□□□ -0.26
DEPDC4-202ENST00000378244 HMX1Q9NP08 348 aaPredicted RBP13.46□□□□□ -0.26
DEPDC4-202ENST00000378244 hCG_1984214I3L0E3 225 aa13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 MYCNP04198 464 aaPredicted RBP13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 CCL5P13501 91 aa13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 GUCY1B3Q02153 619 aa13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 PDE4DQ08499 809 aa13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 FBXO16Q8IX29 292 aaPredicted RBP13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 ZNF713Q8N859 430 aaPredicted RBP13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 TRPV1Q8NER1 839 aa13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 IL31RAQ8NI17 732 aa13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 CCDC12Q8WUD4 166 aaPredicted RBP13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 ARMC5Q96C12 935 aa13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 DEFB118Q96PH6 123 aa13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 C6orf50Q9HD87 102 aa13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 RIC8AQ9NPQ8 531 aa13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 PXMP2Q9NR77 195 aa13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 ASB14A6NK59 587 aa13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 SPDYE3A6NKU9 549 aa13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 MAMDC4Q6UXC1 1216 aa13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 FAM184AQ8NB25 1140 aa13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 DNERQ8NFT8 737 aa13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 LENG1Q96BZ8 264 aaPredicted RBP13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 ZMYND12Q9H0C1 365 aa13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 PDGFCQ9NRA1 345 aa13.45□□□□□ -0.26
DEPDC4-202ENST00000378244 NR3C2P08235 984 aa13.44□□□□□ -0.26
DEPDC4-202ENST00000378244 PTGS1P23219 599 aa13.44□□□□□ -0.26
DEPDC4-202ENST00000378244 ACVR2BQ13705 512 aa13.44□□□□□ -0.26
DEPDC4-202ENST00000378244 ZNF467Q7Z7K2 595 aaPredicted RBP13.44□□□□□ -0.26
DEPDC4-202ENST00000378244 CCDC148Q8NFR7 591 aa13.44□□□□□ -0.26
DEPDC4-202ENST00000378244 PDCD2LQ9BRP1 358 aa13.44□□□□□ -0.26
DEPDC4-202ENST00000378244 RPTORQ8N122 1335 aa13.44□□□□□ -0.26
DEPDC4-202ENST00000378244 STK36Q9NRP7 1315 aa13.44□□□□□ -0.26
DEPDC4-202ENST00000378244 PIK3CDO00329 1044 aa13.44□□□□□ -0.26
DEPDC4-202ENST00000378244 CAPN15O75808 1086 aa13.44□□□□□ -0.26
DEPDC4-202ENST00000378244 CYBAP13498 195 aa13.44□□□□□ -0.26
DEPDC4-202ENST00000378244 GNA11P29992 359 aa13.44□□□□□ -0.26
DEPDC4-202ENST00000378244 TMEM63BQ5T3F8 832 aa13.44□□□□□ -0.26
DEPDC4-202ENST00000378244 MAP3K21Q5TCX8 1036 aa13.44□□□□□ -0.26
DEPDC4-202ENST00000378244 PPP1R18Q6NYC8 613 aa13.44□□□□□ -0.26
DEPDC4-202ENST00000378244 REXO1Q8N1G1 1221 aaKnown RBP13.44□□□□□ -0.26
DEPDC4-202ENST00000378244 ABHD16BQ9H3Z7 469 aa13.44□□□□□ -0.26
DEPDC4-202ENST00000378244 MAP3K20Q9NYL2 800 aaKnown RBP13.44□□□□□ -0.26
DEPDC4-202ENST00000378244 RTEL1Q9NZ71 1219 aa13.44□□□□□ -0.26
DEPDC4-202ENST00000378244 PCDHA6Q9UN73 950 aa13.44□□□□□ -0.26
DEPDC4-202ENST00000378244 PCDHA8Q9Y5H6 950 aa13.44□□□□□ -0.26
DEPDC4-202ENST00000378244 K7ELQ4 463 aaPredicted RBP13.43□□□□□ -0.26
DEPDC4-202ENST00000378244 IGHA2P01877 340 aa13.43□□□□□ -0.26
DEPDC4-202ENST00000378244 XBP1P17861 261 aa13.43□□□□□ -0.26
DEPDC4-202ENST00000378244 GHRHRQ02643 423 aa13.43□□□□□ -0.26
DEPDC4-202ENST00000378244 PGM5Q15124 567 aa13.43□□□□□ -0.26
DEPDC4-202ENST00000378244 CCDC144BQ3MJ40 725 aa13.43□□□□□ -0.26
DEPDC4-202ENST00000378244 SEPT14Q6ZU15 432 aa13.43□□□□□ -0.26
DEPDC4-202ENST00000378244 SPRYD3Q8NCJ5 442 aa13.43□□□□□ -0.26
DEPDC4-202ENST00000378244 WASF1Q92558 559 aa13.43□□□□□ -0.26
DEPDC4-202ENST00000378244 LLPHQ9BRT6 129 aaKnown RBP13.43□□□□□ -0.26
DEPDC4-202ENST00000378244 TMEM106CQ9BVX2 250 aa13.43□□□□□ -0.26
DEPDC4-202ENST00000378244 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.43□□□□□ -0.26
DEPDC4-202ENST00000378244 SYNGAP1Q96PV0 1343 aa13.43□□□□□ -0.26
DEPDC4-202ENST00000378244 ZNF236Q9UL36 1845 aa13.43□□□□□ -0.26
DEPDC4-202ENST00000378244 ZNF865P0CJ78 1059 aaPredicted RBP13.42□□□□□ -0.26
DEPDC4-202ENST00000378244 ADCYAP1R1P41586 468 aa13.42□□□□□ -0.26
DEPDC4-202ENST00000378244 SOX10P56693 466 aa13.42□□□□□ -0.26
DEPDC4-202ENST00000378244 IL27Q8NEV9 243 aa13.42□□□□□ -0.26
DEPDC4-202ENST00000378244 MPHOSPH6Q99547 160 aaKnown RBP13.42□□□□□ -0.26
DEPDC4-202ENST00000378244 PLXNA1Q9UIW2 1896 aa13.42□□□□□ -0.26
DEPDC4-202ENST00000378244 MCM3APO60318 1980 aa13.42□□□□□ -0.26
DEPDC4-202ENST00000378244 TRIM29Q14134 588 aa13.42□□□□□ -0.26
DEPDC4-202ENST00000378244 STXBP2Q15833 593 aa13.42□□□□□ -0.26
DEPDC4-202ENST00000378244 GJC2Q5T442 439 aaPredicted RBP13.42□□□□□ -0.26
DEPDC4-202ENST00000378244 HSCBQ8IWL3 235 aa13.42□□□□□ -0.26
DEPDC4-202ENST00000378244 MSL3Q8N5Y2 521 aaKnown RBP13.42□□□□□ -0.26
DEPDC4-202ENST00000378244 OXER1Q8TDS5 423 aa13.42□□□□□ -0.26
DEPDC4-202ENST00000378244 SH3GLB2Q9NR46 395 aa13.42□□□□□ -0.26
DEPDC4-202ENST00000378244 PCDHA4Q9UN74 947 aa13.42□□□□□ -0.26
DEPDC4-202ENST00000378244 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.41□□□□□ -0.26
DEPDC4-202ENST00000378244 ESYT2A0FGR8 921 aa13.41□□□□□ -0.26
DEPDC4-202ENST00000378244 POTEFA5A3E0 1075 aa13.41□□□□□ -0.26
DEPDC4-202ENST00000378244 ADCY6O43306 1168 aa13.41□□□□□ -0.26
DEPDC4-202ENST00000378244 GJB2P29033 226 aa13.41□□□□□ -0.26
DEPDC4-202ENST00000378244 HMGN5P82970 282 aaKnown RBP13.41□□□□□ -0.26
DEPDC4-202ENST00000378244 PHF20Q9BVI0 1012 aa13.41□□□□□ -0.26
DEPDC4-202ENST00000378244 ANO3Q9BYT9 981 aa13.41□□□□□ -0.26
DEPDC4-202ENST00000378244 SMC3Q9UQE7 1217 aa13.41□□□□□ -0.26
DEPDC4-202ENST00000378244 B4DLN1 442 aa13.41□□□□□ -0.26
DEPDC4-202ENST00000378244 SORBS3O60504 671 aa13.41□□□□□ -0.26
DEPDC4-202ENST00000378244 EDNRBP24530 442 aa13.41□□□□□ -0.26
DEPDC4-202ENST00000378244 MRPS9P82933 396 aaKnown RBP13.41□□□□□ -0.26
DEPDC4-202ENST00000378244 NPY5RQ15761 445 aa13.41□□□□□ -0.26
DEPDC4-202ENST00000378244 KRT40Q6A162 431 aa13.41□□□□□ -0.26
DEPDC4-202ENST00000378244 VSIG10LQ86VR7 867 aa13.41□□□□□ -0.26
DEPDC4-202ENST00000378244 BLIDQ8IZY5 108 aa13.41□□□□□ -0.26
DEPDC4-202ENST00000378244 SAMD3Q8N6K7 520 aa13.41□□□□□ -0.26
DEPDC4-202ENST00000378244 U2AF1L4Q8WU68 220 aaKnown RBP13.41□□□□□ -0.26
DEPDC4-202ENST00000378244 C8orf76Q96K31 380 aa13.41□□□□□ -0.26
DEPDC4-202ENST00000378244 IWS1Q96ST2 819 aa13.41□□□□□ -0.26
DEPDC4-202ENST00000378244 KATNBL1Q9H079 304 aa13.41□□□□□ -0.26
DEPDC4-202ENST00000378244 LCTP09848 1927 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms