RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 LSG1Q9H089 658 aaKnown RBP11.99□□□□□ -0.49
PCDHGA1-201ENST00000378105 SP4Q02446 784 aa11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 LRRC47Q8N1G4 583 aaKnown RBP11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 GDAP1L1Q96MZ0 367 aa11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 PAPOLBQ9NRJ5 636 aaKnown RBP11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 ZNF277Q9NRM2 450 aaPredicted RBP11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 AASDHPPTQ9NRN7 309 aa11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 RTL9Q8NET4 1388 aa11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 EIF3FO00303 357 aaPredicted RBP11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 USP17L8P0C7I0 530 aa11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 AOC3Q16853 763 aa11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 WDR75Q8IWA0 830 aaKnown RBP11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 DIS3Q9Y2L1 958 aaKnown RBP11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 CALM1P0DP23 149 aa11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 CALM2P0DP24 149 aa11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 CALM3P0DP25 149 aa11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 PAPOLAP51003 745 aaKnown RBP11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 TMEM266Q2M3C6 531 aa11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 ZNF394Q53GI3 561 aa11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 TCP11L1Q9NUJ3 509 aa11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 PKD2L1Q9P0L9 805 aa11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 PIM2Q9P1W9 311 aa11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 UBN2Q6ZU65 1347 aa11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 CDHR2Q9BYE9 1310 aa11.98□□□□□ -0.49
PCDHGA1-201ENST00000378105 KIAA0754O94854 1291 aa11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 LONRF2Q1L5Z9 754 aa11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 ATG9AQ7Z3C6 839 aa11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 MAP4K1Q92918 833 aa11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 PLIN2Q99541 437 aa11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 KLC4Q9NSK0 619 aa11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 MAGEC2Q9UBF1 373 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 KCNJ14Q9UNX9 436 aa11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 MCM7P33993 719 aa11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 AFMP43652 599 aa11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 STIM1Q13586 685 aa11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 SDCCAG8Q86SQ7 713 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 CCDC50Q8IVM0 306 aa11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 SLC43A3Q8NBI5 491 aa11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 DYNLL2Q96FJ2 89 aa11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 RSRC1Q96IZ7 334 aaKnown RBP11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 HOMER2Q9NSB8 354 aa11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 TNKSO95271 1327 aa11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 NEFHP12036 1026 aa11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 TNIP1Q15025 636 aa11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 RC3H1Q5TC82 1133 aaKnown RBP11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 DPY19L2Q6NUT2 758 aa11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 CCDC148Q8NFR7 591 aa11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 CD209Q9NNX6 404 aa11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 INCENPQ9NQS7 918 aa11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 SLX4Q8IY92 1834 aa11.97□□□□□ -0.49
PCDHGA1-201ENST00000378105 IRS2Q9Y4H2 1338 aa11.96□□□□□ -0.49
PCDHGA1-201ENST00000378105 VCAM1P19320 739 aa11.96□□□□□ -0.49
PCDHGA1-201ENST00000378105 GPSM2P81274 684 aa11.96□□□□□ -0.49
PCDHGA1-201ENST00000378105 USH1GQ495M9 461 aa11.96□□□□□ -0.49
PCDHGA1-201ENST00000378105 HSP90AA4PQ58FG1 418 aa11.96□□□□□ -0.49
PCDHGA1-201ENST00000378105 MAEAQ7L5Y9 396 aa11.96□□□□□ -0.49
PCDHGA1-201ENST00000378105 FUT8Q9BYC5 575 aa11.96□□□□□ -0.49
PCDHGA1-201ENST00000378105 FAM107BQ9H098 131 aa11.96□□□□□ -0.49
PCDHGA1-201ENST00000378105 PHIPQ8WWQ0 1821 aa11.96□□□□□ -0.49
PCDHGA1-201ENST00000378105 FAM160A1Q05DH4 1040 aa11.96□□□□□ -0.49
PCDHGA1-201ENST00000378105 MYO1EQ12965 1108 aa11.96□□□□□ -0.49
PCDHGA1-201ENST00000378105 FXNQ16595 210 aa11.96□□□□□ -0.49
PCDHGA1-201ENST00000378105 CCDC121Q6ZUS5 278 aa11.96□□□□□ -0.49
PCDHGA1-201ENST00000378105 STAG2Q8N3U4 1231 aa11.96□□□□□ -0.49
PCDHGA1-201ENST00000378105 RAB34Q9BZG1 259 aa11.96□□□□□ -0.49
PCDHGA1-201ENST00000378105 GPHNQ9NQX3 736 aaPredicted RBP11.96□□□□□ -0.49
PCDHGA1-201ENST00000378105 MYO1AQ9UBC5 1043 aa11.96□□□□□ -0.49
PCDHGA1-201ENST00000378105 ATP8B1O43520 1251 aa11.96□□□□□ -0.5
PCDHGA1-201ENST00000378105 NTSR2O95665 410 aa11.96□□□□□ -0.5
PCDHGA1-201ENST00000378105 MRPL12P52815 198 aaKnown RBP11.96□□□□□ -0.5
PCDHGA1-201ENST00000378105 ZNF654Q8IZM8 581 aa11.96□□□□□ -0.5
PCDHGA1-201ENST00000378105 SPICE1Q8N0Z3 855 aa11.96□□□□□ -0.5
PCDHGA1-201ENST00000378105 RBM41Q96IZ5 413 aaKnown RBP11.96□□□□□ -0.5
PCDHGA1-201ENST00000378105 TSC22D3Q99576 134 aa11.96□□□□□ -0.5
PCDHGA1-201ENST00000378105 BRIP1Q9BX63 1249 aa11.96□□□□□ -0.5
PCDHGA1-201ENST00000378105 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.96□□□□□ -0.5
PCDHGA1-201ENST00000378105 PSD3Q9NYI0 1048 aa11.96□□□□□ -0.5
PCDHGA1-201ENST00000378105 ARPP21Q9UBL0 812 aaPredicted RBP11.96□□□□□ -0.5
PCDHGA1-201ENST00000378105 RABL6Q3YEC7 729 aaPredicted RBP11.96□□□□□ -0.5
PCDHGA1-201ENST00000378105 KANK3Q6NY19 840 aa11.96□□□□□ -0.5
PCDHGA1-201ENST00000378105 MIGA2Q7L4E1 593 aa11.96□□□□□ -0.5
PCDHGA1-201ENST00000378105 TRIM50Q86XT4 487 aa11.96□□□□□ -0.5
PCDHGA1-201ENST00000378105 COL23A1Q86Y22 540 aaPredicted RBP11.96□□□□□ -0.5
PCDHGA1-201ENST00000378105 BCAS4Q8TDM0 211 aa11.96□□□□□ -0.5
PCDHGA1-201ENST00000378105 TRIM7Q9C029 511 aa11.96□□□□□ -0.5
PCDHGA1-201ENST00000378105 C6orf50Q9HD87 102 aa11.96□□□□□ -0.5
PCDHGA1-201ENST00000378105 SLC39A2Q9NP94 309 aa11.96□□□□□ -0.5
PCDHGA1-201ENST00000378105 TMA7Q9Y2S6 64 aaKnown RBP11.96□□□□□ -0.5
PCDHGA1-201ENST00000378105 SZT2Q5T011 3432 aa11.96□□□□□ -0.5
PCDHGA1-201ENST00000378105 TRIM75PA6NK02 468 aa11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 FAM196BA6NMK8 535 aa11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 POLE2P56282 527 aa11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 LETM2Q2VYF4 491 aa11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 MAP7D1Q3KQU3 841 aa11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 CCDC65Q8IXS2 484 aa11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 CSRNP1Q96S65 589 aa11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 PIDD1Q9HB75 910 aa11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 DACT1Q9NYF0 836 aa11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 VPS54Q9P1Q0 977 aa11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 FRMPD2Q68DX3 1309 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms