RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 GON4LQ3T8J9 2241 aa9.05□□□□□ -0.96
CKAP2-203ENST00000378037 GOLGA8IPA6NC78 632 aa9.05□□□□□ -0.96
CKAP2-203ENST00000378037 GOLGA8JA6NMD2 632 aa9.05□□□□□ -0.96
CKAP2-203ENST00000378037 ELF2Q15723 593 aa9.05□□□□□ -0.96
CKAP2-203ENST00000378037 GLIPR1L2Q4G1C9 344 aa9.05□□□□□ -0.96
CKAP2-203ENST00000378037 SLC10A5Q5PT55 438 aa9.05□□□□□ -0.96
CKAP2-203ENST00000378037 DGKHQ86XP1 1220 aa9.05□□□□□ -0.96
CKAP2-203ENST00000378037 LRRC8AQ8IWT6 810 aa9.05□□□□□ -0.96
CKAP2-203ENST00000378037 PDCL2Q8N4E4 241 aa9.05□□□□□ -0.96
CKAP2-203ENST00000378037 GLIS3Q8NEA6 775 aa9.05□□□□□ -0.96
CKAP2-203ENST00000378037 CEP89Q96ST8 783 aa9.05□□□□□ -0.96
CKAP2-203ENST00000378037 IKZF4Q9H2S9 585 aa9.05□□□□□ -0.96
CKAP2-203ENST00000378037 MAD2L2Q9UI95 211 aa9.05□□□□□ -0.96
CKAP2-203ENST00000378037 FBXO2Q9UK22 296 aaPredicted RBP9.05□□□□□ -0.96
CKAP2-203ENST00000378037 PCDHA6Q9UN73 950 aa9.05□□□□□ -0.96
CKAP2-203ENST00000378037 PAXBP1Q9Y5B6 917 aa9.05□□□□□ -0.96
CKAP2-203ENST00000378037 PCDHA8Q9Y5H6 950 aa9.05□□□□□ -0.96
CKAP2-203ENST00000378037 CXCR5P32302 372 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 PRCPP42785 496 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 KLK7P49862 253 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 GMPSP49915 693 aaPredicted RBP9.04□□□□□ -0.96
CKAP2-203ENST00000378037 STAT2P52630 851 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 OSTNP61366 133 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 APBA1Q02410 837 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 MORC3Q14149 939 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 ALX1Q15699 326 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 NBPF12Q5TAG4 269 aaPredicted RBP9.04□□□□□ -0.96
CKAP2-203ENST00000378037 APOBEC3HQ6NTF7 200 aaKnown RBP9.04□□□□□ -0.96
CKAP2-203ENST00000378037 KRT25Q7Z3Z0 450 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 DHX40Q8IX18 779 aaKnown RBP9.04□□□□□ -0.96
CKAP2-203ENST00000378037 CARD6Q9BX69 1037 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 SPTLC3Q9NUV7 552 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 KMT5BQ4FZB7 885 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 CCDC125Q86Z20 511 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 FLAD1Q8NFF5 587 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 NEDD1Q8NHV4 660 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 AMNQ9BXJ7 453 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 SRPRBQ9Y5M8 271 aaKnown RBP9.04□□□□□ -0.96
CKAP2-203ENST00000378037 C4AP0C0L4 1744 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 C4BP0C0L5 1744 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 GPR75-ASB3A0A0A6YYF3 556 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 KCNJ18B7U540 433 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 BUB1O43683 1085 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 CASQ1P31415 396 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 AMPD3Q01432 767 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 KCNJ12Q14500 433 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 KANK3Q6NY19 840 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 RRAGAQ7L523 313 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 ANKRD35Q8N283 1001 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 NLGN2Q8NFZ4 835 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 ANO3Q9BYT9 981 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 GGA3Q9NZ52 723 aa9.04□□□□□ -0.96
CKAP2-203ENST00000378037 LRRN2O75325 713 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 RHBDL3P58872 404 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 RBL2Q08999 1139 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 SYCP1Q15431 976 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 KCNB2Q92953 911 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 TSG101Q99816 390 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 JMJD4Q9H9V9 463 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 SLFN14P0C7P3 912 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 CD44P16070 742 aaKnown RBP9.03□□□□□ -0.96
CKAP2-203ENST00000378037 ABCB4P21439 1286 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 STK4Q13043 487 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 ERCC6LQ2NKX8 1250 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 SYDE2Q5VT97 1194 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 RESP18Q5W5W9 173 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 ZNF771Q7L3S4 317 aaPredicted RBP9.03□□□□□ -0.96
CKAP2-203ENST00000378037 CDR2LQ86X02 465 aaPredicted RBP9.03□□□□□ -0.96
CKAP2-203ENST00000378037 BCAS3Q9H6U6 928 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 CHORDC1Q9UHD1 332 aaPredicted RBP9.03□□□□□ -0.96
CKAP2-203ENST00000378037 ZNF215Q9UL58 517 aaPredicted RBP9.03□□□□□ -0.96
CKAP2-203ENST00000378037 LUC7L2Q9Y383 392 aaKnown RBP9.03□□□□□ -0.96
CKAP2-203ENST00000378037 KIF5CO60282 957 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 PNMA6AP0CW24 399 aaPredicted RBP9.03□□□□□ -0.96
CKAP2-203ENST00000378037 PTPAQ15257 358 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 SPA17Q15506 151 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 DNAJC21Q5F1R6 531 aaKnown RBP9.03□□□□□ -0.96
CKAP2-203ENST00000378037 CCDC181Q5TID7 509 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 LRCH2Q5VUJ6 765 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 CNKSR2Q8WXI2 1034 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 CRAMP1Q96RY5 1269 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 PHF20Q9BVI0 1012 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 BARHL2Q9NY43 387 aa9.03□□□□□ -0.96
CKAP2-203ENST00000378037 A0A1W2PQ27 194 aa9.02□□□□□ -0.97
CKAP2-203ENST00000378037 A0A1W2PQ64 194 aa9.02□□□□□ -0.97
CKAP2-203ENST00000378037 A0A1W2PQD8 194 aa9.02□□□□□ -0.97
CKAP2-203ENST00000378037 DLATP10515 647 aaKnown RBP9.02□□□□□ -0.97
CKAP2-203ENST00000378037 SOX10P56693 466 aa9.02□□□□□ -0.97
CKAP2-203ENST00000378037 FAM102BQ5T8I3 360 aa9.02□□□□□ -0.97
CKAP2-203ENST00000378037 SULF1Q8IWU6 871 aa9.02□□□□□ -0.97
CKAP2-203ENST00000378037 LARP4BQ92615 738 aaKnown RBP9.02□□□□□ -0.97
CKAP2-203ENST00000378037 FERMT2Q96AC1 680 aa9.02□□□□□ -0.97
CKAP2-203ENST00000378037 ZNF70Q9UC06 446 aaPredicted RBP9.02□□□□□ -0.97
CKAP2-203ENST00000378037 AKR1B15C9JRZ8 316 aaPredicted RBP9.02□□□□□ -0.97
CKAP2-203ENST00000378037 ARHGEF16Q5VV41 709 aa9.02□□□□□ -0.97
CKAP2-203ENST00000378037 CYFIP1Q7L576 1253 aa9.02□□□□□ -0.97
CKAP2-203ENST00000378037 PROCA1Q8NCQ7 364 aaPredicted RBP9.02□□□□□ -0.97
CKAP2-203ENST00000378037 DDX12PQ92771 950 aa9.02□□□□□ -0.97
CKAP2-203ENST00000378037 CCDC42Q96M95 316 aa9.02□□□□□ -0.97
CKAP2-203ENST00000378037 DEFB129Q9H1M3 183 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms