RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 ACBD3Q9H3P7 528 aa16.42■□□□□ 0.22
UBA1-202ENST00000377269 FAM204AQ9H8W3 233 aa16.42■□□□□ 0.22
UBA1-202ENST00000377269 DONSONQ9NYP3 566 aa16.42■□□□□ 0.22
UBA1-202ENST00000377269 POLR2AP24928 1970 aaKnown RBP16.42■□□□□ 0.22
UBA1-202ENST00000377269 GRM4Q14833 912 aa16.42■□□□□ 0.22
UBA1-202ENST00000377269 ZKSCAN4Q969J2 545 aaPredicted RBP16.42■□□□□ 0.22
UBA1-202ENST00000377269 CCDC102AQ96A19 550 aa16.42■□□□□ 0.22
UBA1-202ENST00000377269 V9GY48 417 aaPredicted RBP16.42■□□□□ 0.22
UBA1-202ENST00000377269 SSC5DA1L4H1 1573 aa16.41■□□□□ 0.22
UBA1-202ENST00000377269 CDKL5O76039 1030 aa16.41■□□□□ 0.22
UBA1-202ENST00000377269 FMNL1O95466 1100 aaPredicted RBP16.41■□□□□ 0.22
UBA1-202ENST00000377269 PFKFB1P16118 471 aa16.41■□□□□ 0.22
UBA1-202ENST00000377269 SSRP1Q08945 709 aaKnown RBP16.41■□□□□ 0.22
UBA1-202ENST00000377269 WWC2Q6AWC2 1192 aa16.41■□□□□ 0.22
UBA1-202ENST00000377269 MRPL44Q9H9J2 332 aaKnown RBP16.41■□□□□ 0.22
UBA1-202ENST00000377269 NYAP2Q9P242 653 aa16.41■□□□□ 0.22
UBA1-202ENST00000377269 PUF60Q9UHX1 559 aaKnown RBP16.41■□□□□ 0.22
UBA1-202ENST00000377269 MYH8P13535 1937 aa16.41■□□□□ 0.22
UBA1-202ENST00000377269 PITPNM2Q9BZ72 1349 aa16.41■□□□□ 0.22
UBA1-202ENST00000377269 PALM3A6NDB9 673 aaPredicted RBP16.41■□□□□ 0.22
UBA1-202ENST00000377269 CYTH3O43739 400 aa16.41■□□□□ 0.22
UBA1-202ENST00000377269 AARSP49588 968 aaKnown RBP eCLIP16.41■□□□□ 0.22
UBA1-202ENST00000377269 VSNL1P62760 191 aa16.41■□□□□ 0.22
UBA1-202ENST00000377269 KARSQ15046 597 aaKnown RBP16.41■□□□□ 0.22
UBA1-202ENST00000377269 SPICE1Q8N0Z3 855 aa16.41■□□□□ 0.22
UBA1-202ENST00000377269 UBA5Q9GZZ9 404 aa16.41■□□□□ 0.22
UBA1-202ENST00000377269 VIPAS39Q9H9C1 493 aa16.41■□□□□ 0.22
UBA1-202ENST00000377269 RRAGCQ9HB90 399 aa16.41■□□□□ 0.22
UBA1-202ENST00000377269 RBM28Q9NW13 759 aaKnown RBP16.41■□□□□ 0.22
UBA1-202ENST00000377269 FANCLQ9NW38 375 aa16.41■□□□□ 0.22
UBA1-202ENST00000377269 IQCA1LA6NCM1 817 aa16.4■□□□□ 0.22
UBA1-202ENST00000377269 SPECC1LQ69YQ0 1117 aa16.4■□□□□ 0.22
UBA1-202ENST00000377269 ISM2Q6H9L7 571 aa16.4■□□□□ 0.22
UBA1-202ENST00000377269 KCTD1Q719H9 257 aa16.4■□□□□ 0.22
UBA1-202ENST00000377269 MKL1Q969V6 931 aa16.4■□□□□ 0.22
UBA1-202ENST00000377269 WRNIP1Q96S55 665 aa16.4■□□□□ 0.22
UBA1-202ENST00000377269 ALG1Q9BT22 464 aa16.4■□□□□ 0.22
UBA1-202ENST00000377269 GPCPD1Q9NPB8 672 aa16.4■□□□□ 0.22
UBA1-202ENST00000377269 KLRF2D3W0D1 207 aa16.4■□□□□ 0.22
UBA1-202ENST00000377269 PARP1P09874 1014 aaKnown RBP16.4■□□□□ 0.22
UBA1-202ENST00000377269 CCDC175P0C221 793 aa16.4■□□□□ 0.22
UBA1-202ENST00000377269 KIF5BP33176 963 aa16.4■□□□□ 0.22
UBA1-202ENST00000377269 FMR1Q06787 632 aaKnown RBP eCLIP16.4■□□□□ 0.221e-6■■□□□ 11.9
UBA1-202ENST00000377269 ZYXQ15942 572 aaKnown RBP16.4■□□□□ 0.22
UBA1-202ENST00000377269 KIAA1755Q5JYT7 1200 aa16.4■□□□□ 0.22
UBA1-202ENST00000377269 TTBK2Q6IQ55 1244 aa16.4■□□□□ 0.22
UBA1-202ENST00000377269 RPAINQ86UA6 219 aa16.4■□□□□ 0.22
UBA1-202ENST00000377269 MICALL1Q8N3F8 863 aa16.4■□□□□ 0.22
UBA1-202ENST00000377269 NUP88Q99567 741 aaPredicted RBP16.4■□□□□ 0.22
UBA1-202ENST00000377269 IRX2Q9BZI1 471 aaPredicted RBP16.4■□□□□ 0.22
UBA1-202ENST00000377269 GREB1LQ9C091 1923 aaPredicted RBP16.39■□□□□ 0.22
UBA1-202ENST00000377269 CNTNAP5Q8WYK1 1306 aa16.39■□□□□ 0.21
UBA1-202ENST00000377269 LRRIQ3A6PVS8 624 aaPredicted RBP16.39■□□□□ 0.21
UBA1-202ENST00000377269 PHACTR2O75167 634 aa16.39■□□□□ 0.21
UBA1-202ENST00000377269 PRR29P0C7W0 189 aa16.39■□□□□ 0.21
UBA1-202ENST00000377269 PPP2R5BQ15173 497 aa16.39■□□□□ 0.21
UBA1-202ENST00000377269 PKN1Q16512 942 aa16.39■□□□□ 0.21
UBA1-202ENST00000377269 PTPN21Q16825 1174 aa16.39■□□□□ 0.21
UBA1-202ENST00000377269 SHISA4Q96DD7 197 aa16.39■□□□□ 0.21
UBA1-202ENST00000377269 DESI2Q9BSY9 194 aa16.39■□□□□ 0.21
UBA1-202ENST00000377269 F5H6K3 240 aa16.39■□□□□ 0.21
UBA1-202ENST00000377269 KIF1CO43896 1103 aaKnown RBP16.39■□□□□ 0.21
UBA1-202ENST00000377269 PRPF6O94906 941 aaKnown RBP16.39■□□□□ 0.21
UBA1-202ENST00000377269 SNHG28P0DPA3 235 aa16.39■□□□□ 0.21
UBA1-202ENST00000377269 ADKP55263 362 aaKnown RBP16.39■□□□□ 0.21
UBA1-202ENST00000377269 KLRC3Q07444 240 aa16.39■□□□□ 0.21
UBA1-202ENST00000377269 MAP1SQ66K74 1059 aaPredicted RBP16.39■□□□□ 0.21
UBA1-202ENST00000377269 PDILTQ8N807 584 aa16.39■□□□□ 0.21
UBA1-202ENST00000377269 AFAP1L1Q8TED9 768 aa16.39■□□□□ 0.21
UBA1-202ENST00000377269 MAP3K14Q99558 947 aa16.39■□□□□ 0.21
UBA1-202ENST00000377269 VAT1LQ9HCJ6 419 aa16.39■□□□□ 0.21
UBA1-202ENST00000377269 CLEC11AQ9Y240 323 aa16.39■□□□□ 0.21
UBA1-202ENST00000377269 PPP2R3BQ9Y5P8 575 aa16.39■□□□□ 0.21
UBA1-202ENST00000377269 RNF40O75150 1001 aa16.38■□□□□ 0.21
UBA1-202ENST00000377269 ASNSP08243 561 aa16.38■□□□□ 0.21
UBA1-202ENST00000377269 SLC16A2P36021 539 aa16.38■□□□□ 0.21
UBA1-202ENST00000377269 MAP2K2P36507 400 aa16.38■□□□□ 0.21
UBA1-202ENST00000377269 DGKZQ13574 1117 aa16.38■□□□□ 0.21
UBA1-202ENST00000377269 MYSM1Q5VVJ2 828 aa16.38■□□□□ 0.21
UBA1-202ENST00000377269 DCAF15Q66K64 600 aa16.38■□□□□ 0.21
UBA1-202ENST00000377269 WDR93Q6P2C0 686 aa16.38■□□□□ 0.21
UBA1-202ENST00000377269 BRAPQ7Z569 592 aa16.38■□□□□ 0.21
UBA1-202ENST00000377269 TRIM22Q8IYM9 498 aa16.38■□□□□ 0.21
UBA1-202ENST00000377269 ANKRD20A12PQ8NF67 263 aa16.38■□□□□ 0.21
UBA1-202ENST00000377269 KAT2BQ92831 832 aa16.38■□□□□ 0.21
UBA1-202ENST00000377269 KLRG1Q96E93 195 aa16.38■□□□□ 0.21
UBA1-202ENST00000377269 C8orf76Q96K31 380 aa16.38■□□□□ 0.21
UBA1-202ENST00000377269 ZNF341Q9BYN7 854 aa16.38■□□□□ 0.21
UBA1-202ENST00000377269 NMRK2Q9NPI5 230 aa16.38■□□□□ 0.21
UBA1-202ENST00000377269 ERLIN2O94905 339 aa16.38■□□□□ 0.21
UBA1-202ENST00000377269 SYF2O95926 243 aaKnown RBP16.38■□□□□ 0.21
UBA1-202ENST00000377269 SUPT20HL1Q3ZLR7 823 aa16.38■□□□□ 0.21
UBA1-202ENST00000377269 SLFN13Q68D06 897 aa16.38■□□□□ 0.21
UBA1-202ENST00000377269 MOB2Q70IA6 237 aa16.38■□□□□ 0.21
UBA1-202ENST00000377269 ZC3H15Q8WU90 426 aaKnown RBP16.38■□□□□ 0.21
UBA1-202ENST00000377269 RNF26Q9BY78 433 aaPredicted RBP16.38■□□□□ 0.21
UBA1-202ENST00000377269 PLEKHA4Q9H4M7 779 aa16.38■□□□□ 0.21
UBA1-202ENST00000377269 HPSEQ9Y251 543 aa16.38■□□□□ 0.21
UBA1-202ENST00000377269 KIF5CO60282 957 aa16.37■□□□□ 0.21
UBA1-202ENST00000377269 CTNND1O60716 968 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms