RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 KCNK18Q7Z418 384 aa18.11■□□□□ 0.49
TRIM27-202ENST00000377199 ZHX3Q9H4I2 956 aa18.11■□□□□ 0.49
TRIM27-202ENST00000377199 AMPD2Q01433 879 aa18.11■□□□□ 0.49
TRIM27-202ENST00000377199 VPS72Q15906 364 aa18.11■□□□□ 0.49
TRIM27-202ENST00000377199 MIIPQ5JXC2 388 aa18.11■□□□□ 0.49
TRIM27-202ENST00000377199 HDXQ7Z353 690 aa18.11■□□□□ 0.49
TRIM27-202ENST00000377199 LARP4BQ92615 738 aaKnown RBP18.11■□□□□ 0.49
TRIM27-202ENST00000377199 KRT83P78385 493 aa18.1■□□□□ 0.49
TRIM27-202ENST00000377199 BLOC1S4Q9NUP1 217 aa18.1■□□□□ 0.49
TRIM27-202ENST00000377199 DAGLAQ9Y4D2 1042 aa18.1■□□□□ 0.49
TRIM27-202ENST00000377199 ATP8B1O43520 1251 aa18.1■□□□□ 0.49
TRIM27-202ENST00000377199 HNRNPH2P55795 449 aaKnown RBP18.1■□□□□ 0.49
TRIM27-202ENST00000377199 DOK7Q18PE1 504 aa18.1■□□□□ 0.49
TRIM27-202ENST00000377199 TMEM266Q2M3C6 531 aa18.1■□□□□ 0.49
TRIM27-202ENST00000377199 TBC1D16Q8TBP0 767 aa18.1■□□□□ 0.49
TRIM27-202ENST00000377199 ADAM21Q9UKJ8 722 aa18.1■□□□□ 0.49
TRIM27-202ENST00000377199 ZBTB22O15209 634 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 CXCR5P32302 372 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 C7orf25Q9BPX7 421 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 DDX4Q9NQI0 724 aaKnown RBP18.09■□□□□ 0.49
TRIM27-202ENST00000377199 MYO1AQ9UBC5 1043 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 MYL1P05976 194 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 CACNB3P54284 484 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 FAM193AP78312 1265 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 ZBED6P86452 979 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 CASP8Q14790 479 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 SPA17Q15506 151 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 RRAGAQ7L523 313 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 FAM114A1Q8IWE2 563 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 NELFCDQ8IXH7 590 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 DDX12PQ92771 950 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 PNMA5Q96PV4 448 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 MLXIPQ9HAP2 919 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 FAN1Q9Y2M0 1017 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 KIF5AQ12840 1032 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 KRT79Q5XKE5 535 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 TRAPPC11Q7Z392 1133 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 MSANTD4Q8NCY6 345 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 CUEDC2Q9H467 287 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 NLRC4Q9NPP4 1024 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 MTMR4Q9NYA4 1195 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 SMARCAL1Q9NZC9 954 aa18.09■□□□□ 0.49
TRIM27-202ENST00000377199 PLCG2P16885 1265 aa18.08■□□□□ 0.49
TRIM27-202ENST00000377199 ATP2B4P23634 1241 aa18.08■□□□□ 0.49
TRIM27-202ENST00000377199 NAP1L1P55209 391 aaKnown RBP18.08■□□□□ 0.49
TRIM27-202ENST00000377199 C2orf54Q08AI8 447 aa18.08■□□□□ 0.49
TRIM27-202ENST00000377199 SKIDA1Q1XH10 827 aa18.08■□□□□ 0.49
TRIM27-202ENST00000377199 TTYH3Q9C0H2 523 aa18.08■□□□□ 0.49
TRIM27-202ENST00000377199 NDST4Q9H3R1 872 aa18.08■□□□□ 0.49
TRIM27-202ENST00000377199 L1RE1Q9UN81 338 aa18.08■□□□□ 0.49
TRIM27-202ENST00000377199 LRRIQ3A6PVS8 624 aaPredicted RBP18.08■□□□□ 0.48
TRIM27-202ENST00000377199 POTEB2H3BUK9 544 aa18.08■□□□□ 0.48
TRIM27-202ENST00000377199 ZNF263O14978 683 aa18.08■□□□□ 0.48
TRIM27-202ENST00000377199 AKR1B10O60218 316 aa18.08■□□□□ 0.48
TRIM27-202ENST00000377199 ARID5AQ03989 594 aa18.08■□□□□ 0.48
TRIM27-202ENST00000377199 GPS2Q13227 327 aa18.08■□□□□ 0.48
TRIM27-202ENST00000377199 ECM1Q16610 540 aa18.08■□□□□ 0.48
TRIM27-202ENST00000377199 SHROOM1Q2M3G4 852 aaPredicted RBP18.08■□□□□ 0.48
TRIM27-202ENST00000377199 NOC3LQ8WTT2 800 aaKnown RBP18.08■□□□□ 0.48
TRIM27-202ENST00000377199 CRACR2AQ9BSW2 395 aa18.08■□□□□ 0.48
TRIM27-202ENST00000377199 PLEKHA4Q9H4M7 779 aa18.08■□□□□ 0.48
TRIM27-202ENST00000377199 APBA1Q02410 837 aa18.07■□□□□ 0.48
TRIM27-202ENST00000377199 TCP10Q12799 353 aa18.07■□□□□ 0.48
TRIM27-202ENST00000377199 ADGRF4Q8IZF3 695 aa18.07■□□□□ 0.48
TRIM27-202ENST00000377199 RBM17Q96I25 401 aaKnown RBP18.07■□□□□ 0.48
TRIM27-202ENST00000377199 RAB21Q9UL25 225 aa18.07■□□□□ 0.48
TRIM27-202ENST00000377199 PSMD14O00487 310 aa18.07■□□□□ 0.48
TRIM27-202ENST00000377199 MAP2K7O14733 419 aa18.07■□□□□ 0.48
TRIM27-202ENST00000377199 MOCS3O95396 460 aa18.07■□□□□ 0.48
TRIM27-202ENST00000377199 SNAP25P60880 206 aa18.07■□□□□ 0.48
TRIM27-202ENST00000377199 TRIM34Q9BYJ4 488 aa18.07■□□□□ 0.48
TRIM27-202ENST00000377199 IFIH1Q9BYX4 1025 aaKnown RBP18.07■□□□□ 0.48
TRIM27-202ENST00000377199 UBXN6Q9BZV1 441 aa18.07■□□□□ 0.48
TRIM27-202ENST00000377199 USP17L15C9J2P7 530 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 USP17L10C9JJH3 530 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 USP17L13C9JLJ4 530 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 USP17L11C9JVI0 530 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 USP17L18D6R9N7 530 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 USP17L22D6RA61 530 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 USP17L17D6RBQ6 530 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 USP17L19D6RCP7 530 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 USP17L20D6RJB6 530 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 USP17L24Q0WX57 530 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 VWA3BQ502W6 1294 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 TDRD12Q587J7 1177 aaKnown RBP18.06■□□□□ 0.48
TRIM27-202ENST00000377199 HSP90B2PQ58FF3 399 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 USP17L6PQ6QN14 398 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 CACNA2D4Q7Z3S7 1137 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 SECISBP2LQ93073 1101 aaKnown RBP18.06■□□□□ 0.48
TRIM27-202ENST00000377199 NUP58Q9BVL2 599 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 POLD4Q9HCU8 107 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 EHD2Q9NZN4 543 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 CAPN6Q9Y6Q1 641 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 NPHP3-ACAD11A0A0J9YXS1 232 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 LRRC53A6NM62 1247 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 G3V3G9 751 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 PDE2AO00408 941 aaPredicted RBP18.06■□□□□ 0.48
TRIM27-202ENST00000377199 PPP1R11O60927 126 aaPredicted RBP18.06■□□□□ 0.48
TRIM27-202ENST00000377199 GYS1P13807 737 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 EIF4A3P38919 411 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms