RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 MRFAP1L1Q96HT8 127 aa19.92■□□□□ 0.78
CTTN-203ENST00000376561 MAGEF1Q9HAY2 307 aa19.92■□□□□ 0.78
CTTN-203ENST00000376561 PCDHA12Q9UN75 941 aa19.92■□□□□ 0.78
CTTN-203ENST00000376561 ABCB11O95342 1321 aa19.92■□□□□ 0.78
CTTN-203ENST00000376561 ICAM1P05362 532 aa19.91■□□□□ 0.78
CTTN-203ENST00000376561 CDC25BP30305 580 aa19.91■□□□□ 0.78
CTTN-203ENST00000376561 BACE1P56817 501 aa19.91■□□□□ 0.78
CTTN-203ENST00000376561 ZNF280CQ8ND82 737 aa19.91■□□□□ 0.78
CTTN-203ENST00000376561 GJA10Q969M2 543 aa19.91■□□□□ 0.78
CTTN-203ENST00000376561 TANGO6Q9C0B7 1094 aa19.91■□□□□ 0.78
CTTN-203ENST00000376561 RRAGDQ9NQL2 400 aaPredicted RBP19.91■□□□□ 0.78
CTTN-203ENST00000376561 ZNF536O15090 1300 aa19.91■□□□□ 0.78
CTTN-203ENST00000376561 GCOM1H8Y6P7 765 aaPredicted RBP19.91■□□□□ 0.78
CTTN-203ENST00000376561 MYL1P05976 194 aa19.91■□□□□ 0.78
CTTN-203ENST00000376561 POLR2MP0CAP2 368 aa19.91■□□□□ 0.78
CTTN-203ENST00000376561 FCHSD1Q86WN1 690 aa19.91■□□□□ 0.78
CTTN-203ENST00000376561 GOLGA6L6A8MZA4 724 aa19.9■□□□□ 0.78
CTTN-203ENST00000376561 RPN1P04843 607 aaKnown RBP19.9■□□□□ 0.78
CTTN-203ENST00000376561 CIITAP33076 1130 aa19.9■□□□□ 0.78
CTTN-203ENST00000376561 FMR1Q06787 632 aaKnown RBP eCLIP19.9■□□□□ 0.782e-7■■■■□ 20.6
CTTN-203ENST00000376561 GRB10Q13322 594 aa19.9■□□□□ 0.78
CTTN-203ENST00000376561 CT47A1Q5JQC4 288 aaPredicted RBP19.9■□□□□ 0.78
CTTN-203ENST00000376561 AGBL1Q96MI9 1066 aa19.9■□□□□ 0.78
CTTN-203ENST00000376561 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.9■□□□□ 0.78
CTTN-203ENST00000376561 CCPG1Q9ULG6 757 aa19.9■□□□□ 0.78
CTTN-203ENST00000376561 ZKSCAN5Q9Y2L8 839 aa19.9■□□□□ 0.78
CTTN-203ENST00000376561 PHIPQ8WWQ0 1821 aa19.9■□□□□ 0.78
CTTN-203ENST00000376561 FLOT1O75955 427 aa19.9■□□□□ 0.78
CTTN-203ENST00000376561 CYP3A4P08684 503 aa19.9■□□□□ 0.78
CTTN-203ENST00000376561 ERCC5P28715 1186 aaPredicted RBP19.9■□□□□ 0.78
CTTN-203ENST00000376561 Q4G0T1 1027 aa19.9■□□□□ 0.78
CTTN-203ENST00000376561 PRR16Q569H4 304 aa19.9■□□□□ 0.78
CTTN-203ENST00000376561 KRT79Q5XKE5 535 aa19.9■□□□□ 0.78
CTTN-203ENST00000376561 DRC7Q8IY82 874 aa19.9■□□□□ 0.78
CTTN-203ENST00000376561 ENOX1Q8TC92 643 aaKnown RBP19.9■□□□□ 0.78
CTTN-203ENST00000376561 RPAP3Q9H6T3 665 aaPredicted RBP19.9■□□□□ 0.78
CTTN-203ENST00000376561 RMND1Q9NWS8 449 aa19.9■□□□□ 0.78
CTTN-203ENST00000376561 ZHX2Q9Y6X8 837 aa19.9■□□□□ 0.78
CTTN-203ENST00000376561 FAM86B1E9PN63 330 aa19.89■□□□□ 0.77
CTTN-203ENST00000376561 FAM86B2P0C5J1 330 aa19.89■□□□□ 0.77
CTTN-203ENST00000376561 CD44P16070 742 aaKnown RBP19.89■□□□□ 0.77
CTTN-203ENST00000376561 SLFN12Q8IYM2 578 aa19.89■□□□□ 0.77
CTTN-203ENST00000376561 SNX29Q8TEQ0 813 aa19.89■□□□□ 0.77
CTTN-203ENST00000376561 LENG9Q96B70 501 aa19.89■□□□□ 0.77
CTTN-203ENST00000376561 PNMA5Q96PV4 448 aa19.89■□□□□ 0.77
CTTN-203ENST00000376561 FANCLQ9NW38 375 aa19.89■□□□□ 0.77
CTTN-203ENST00000376561 NOL9Q5SY16 702 aaKnown RBP19.88■□□□□ 0.77
CTTN-203ENST00000376561 SMYD4Q8IYR2 804 aaPredicted RBP19.88■□□□□ 0.77
CTTN-203ENST00000376561 ETNPPLQ8TBG4 499 aa19.88■□□□□ 0.77
CTTN-203ENST00000376561 MED15Q96RN5 788 aa19.88■□□□□ 0.77
CTTN-203ENST00000376561 NUDT12Q9BQG2 462 aa19.88■□□□□ 0.77
CTTN-203ENST00000376561 SLC38A10Q9HBR0 1119 aa19.88■□□□□ 0.77
CTTN-203ENST00000376561 PPP1R9AQ9ULJ8 1098 aa19.88■□□□□ 0.77
CTTN-203ENST00000376561 TBX3O15119 743 aa19.88■□□□□ 0.77
CTTN-203ENST00000376561 ATP1A3P13637 1013 aa19.88■□□□□ 0.77
CTTN-203ENST00000376561 MSNP26038 577 aaKnown RBP19.88■□□□□ 0.77
CTTN-203ENST00000376561 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.88■□□□□ 0.773e-6■■□□□ 11.7
CTTN-203ENST00000376561 DCPSQ96C86 337 aaKnown RBP19.88■□□□□ 0.77
CTTN-203ENST00000376561 CDK5RAP3Q96JB5 506 aa19.88■□□□□ 0.77
CTTN-203ENST00000376561 STK17AQ9UEE5 414 aa19.88■□□□□ 0.77
CTTN-203ENST00000376561 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.88■□□□□ 0.77
CTTN-203ENST00000376561 PARP14Q460N5 1801 aa19.88■□□□□ 0.77
CTTN-203ENST00000376561 PPP1R3GB7ZBB8 358 aa19.87■□□□□ 0.77
CTTN-203ENST00000376561 PRKG1Q13976 671 aa19.87■□□□□ 0.77
CTTN-203ENST00000376561 ZNF658Q5TYW1 1059 aaPredicted RBP19.87■□□□□ 0.77
CTTN-203ENST00000376561 TRMT44Q8IYL2 757 aaKnown RBP19.87■□□□□ 0.77
CTTN-203ENST00000376561 UIMC1Q96RL1 719 aa19.87■□□□□ 0.77
CTTN-203ENST00000376561 USP2O75604 605 aaPredicted RBP19.87■□□□□ 0.77
CTTN-203ENST00000376561 CPXCR1Q8N123 301 aa19.87■□□□□ 0.77
CTTN-203ENST00000376561 C12orf42Q96LP6 360 aa19.87■□□□□ 0.77
CTTN-203ENST00000376561 BLOC1S4Q9NUP1 217 aa19.87■□□□□ 0.77
CTTN-203ENST00000376561 IFNKQ9P0W0 207 aa19.87■□□□□ 0.77
CTTN-203ENST00000376561 NFE2L3Q9Y4A8 694 aa19.87■□□□□ 0.77
CTTN-203ENST00000376561 C19orf81C9J6K1 198 aa19.86■□□□□ 0.77
CTTN-203ENST00000376561 KLRC4O43908 158 aa19.86■□□□□ 0.77
CTTN-203ENST00000376561 FANCCQ00597 558 aa19.86■□□□□ 0.77
CTTN-203ENST00000376561 KCNB1Q14721 858 aa19.86■□□□□ 0.77
CTTN-203ENST00000376561 DPY19L2Q6NUT2 758 aa19.86■□□□□ 0.77
CTTN-203ENST00000376561 DLK2Q6UY11 383 aa19.86■□□□□ 0.77
CTTN-203ENST00000376561 SULF1Q8IWU6 871 aa19.86■□□□□ 0.77
CTTN-203ENST00000376561 ZNF830Q96NB3 372 aaPredicted RBP19.86■□□□□ 0.77
CTTN-203ENST00000376561 TRIM9Q9C026 710 aa19.86■□□□□ 0.77
CTTN-203ENST00000376561 RAVER2Q9HCJ3 691 aaKnown RBP19.86■□□□□ 0.77
CTTN-203ENST00000376561 TPM3P06753 285 aa19.86■□□□□ 0.77
CTTN-203ENST00000376561 ZNF76P36508 570 aa19.86■□□□□ 0.77
CTTN-203ENST00000376561 HMGCS2P54868 508 aa19.86■□□□□ 0.77
CTTN-203ENST00000376561 AMPD3Q01432 767 aa19.86■□□□□ 0.77
CTTN-203ENST00000376561 TMEM119Q4V9L6 283 aa19.86■□□□□ 0.77
CTTN-203ENST00000376561 KLHL10Q6JEL2 608 aa19.86■□□□□ 0.77
CTTN-203ENST00000376561 CYP2W1Q8TAV3 490 aa19.86■□□□□ 0.77
CTTN-203ENST00000376561 C7orf25Q9BPX7 421 aa19.86■□□□□ 0.77
CTTN-203ENST00000376561 XPO4Q9C0E2 1151 aaKnown RBP19.86■□□□□ 0.77
CTTN-203ENST00000376561 EHMT1Q9H9B1 1298 aa19.86■□□□□ 0.77
CTTN-203ENST00000376561 NRBP1Q9UHY1 535 aa19.86■□□□□ 0.77
CTTN-203ENST00000376561 ADM5C9JUS6 153 aa19.85■□□□□ 0.77
CTTN-203ENST00000376561 HSD17B4P51659 736 aa19.85■□□□□ 0.77
CTTN-203ENST00000376561 SEMA3FQ13275 785 aa19.85■□□□□ 0.77
CTTN-203ENST00000376561 KMT5BQ4FZB7 885 aa19.85■□□□□ 0.77
CTTN-203ENST00000376561 CLEC4DQ8WXI8 215 aa19.85■□□□□ 0.77
CTTN-203ENST00000376561 LARP4BQ92615 738 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms