RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 CLEC4DQ8WXI8 215 aa15.47■□□□□ 0.07
CLCN6-205ENST00000376492 COPS5Q92905 334 aa15.47■□□□□ 0.07
CLCN6-205ENST00000376492 GPHNQ9NQX3 736 aaPredicted RBP15.47■□□□□ 0.07
CLCN6-205ENST00000376492 ADD3Q9UEY8 706 aaKnown RBP15.47■□□□□ 0.07
CLCN6-205ENST00000376492 SCN5AQ14524 2016 aa15.46■□□□□ 0.07
CLCN6-205ENST00000376492 IQCF3P0C7M6 154 aa15.46■□□□□ 0.07
CLCN6-205ENST00000376492 RFC2P35250 354 aa15.46■□□□□ 0.07
CLCN6-205ENST00000376492 NOVP48745 357 aa15.46■□□□□ 0.07
CLCN6-205ENST00000376492 PPP2R5BQ15173 497 aa15.46■□□□□ 0.07
CLCN6-205ENST00000376492 VPS53Q5VIR6 699 aa15.46■□□□□ 0.07
CLCN6-205ENST00000376492 TMCO2Q7Z6W1 182 aaPredicted RBP15.46■□□□□ 0.07
CLCN6-205ENST00000376492 PHOSPHO2Q8TCD6 241 aa15.46■□□□□ 0.07
CLCN6-205ENST00000376492 DCAF4Q8WV16 495 aa15.46■□□□□ 0.07
CLCN6-205ENST00000376492 FTOQ9C0B1 505 aaKnown RBP eCLIP15.46■□□□□ 0.07
CLCN6-205ENST00000376492 OSBPL3Q9H4L5 887 aa15.46■□□□□ 0.07
CLCN6-205ENST00000376492 GPCPD1Q9NPB8 672 aa15.46■□□□□ 0.07
CLCN6-205ENST00000376492 PITPNM1O00562 1244 aa15.45■□□□□ 0.06
CLCN6-205ENST00000376492 TLL1O43897 1013 aa15.45■□□□□ 0.06
CLCN6-205ENST00000376492 CHMP4BP1P59074 171 aa15.45■□□□□ 0.06
CLCN6-205ENST00000376492 GRB10Q13322 594 aa15.45■□□□□ 0.06
CLCN6-205ENST00000376492 NFRKBQ6P4R8 1299 aa15.45■□□□□ 0.06
CLCN6-205ENST00000376492 BTNL9Q6UXG8 535 aa15.45■□□□□ 0.06
CLCN6-205ENST00000376492 TICAM2Q86XR7 235 aa15.45■□□□□ 0.06
CLCN6-205ENST00000376492 PLEKHM2Q8IWE5 1019 aa15.45■□□□□ 0.06
CLCN6-205ENST00000376492 RETREG2Q8NC44 543 aa15.45■□□□□ 0.06
CLCN6-205ENST00000376492 EVI5LQ96CN4 794 aa15.45■□□□□ 0.06
CLCN6-205ENST00000376492 LRFN3Q9BTN0 628 aa15.45■□□□□ 0.06
CLCN6-205ENST00000376492 LCHNA4D1U4 455 aa15.44■□□□□ 0.06
CLCN6-205ENST00000376492 LPXNO60711 386 aa15.44■□□□□ 0.06
CLCN6-205ENST00000376492 ARIH2O95376 493 aa15.44■□□□□ 0.06
CLCN6-205ENST00000376492 EDNRBP24530 442 aa15.44■□□□□ 0.06
CLCN6-205ENST00000376492 PDE4DQ08499 809 aa15.44■□□□□ 0.06
CLCN6-205ENST00000376492 RNF207Q6ZRF8 634 aa15.44■□□□□ 0.06
CLCN6-205ENST00000376492 KHSRPQ92945 711 aaKnown RBP eCLIP15.44■□□□□ 0.06
CLCN6-205ENST00000376492 HLA-CQ95604 372 aa15.44■□□□□ 0.06
CLCN6-205ENST00000376492 COG5Q9UP83 839 aa15.44■□□□□ 0.06
CLCN6-205ENST00000376492 TANC1Q9C0D5 1861 aa15.44■□□□□ 0.06
CLCN6-205ENST00000376492 SCN10AQ9Y5Y9 1956 aa15.44■□□□□ 0.06
CLCN6-205ENST00000376492 RAD50Q92878 1312 aa15.43■□□□□ 0.06
CLCN6-205ENST00000376492 LOC102724159A0A0B4J2E5 919 aa15.43■□□□□ 0.06
CLCN6-205ENST00000376492 A6NJR5 290 aa15.43■□□□□ 0.06
CLCN6-205ENST00000376492 ORC4O43929 436 aa15.43■□□□□ 0.06
CLCN6-205ENST00000376492 RPS6P62753 249 aaKnown RBP15.43■□□□□ 0.06
CLCN6-205ENST00000376492 BFSP2Q13515 415 aa15.43■□□□□ 0.06
CLCN6-205ENST00000376492 PWP2Q15269 919 aaKnown RBP15.43■□□□□ 0.06
CLCN6-205ENST00000376492 BRDTQ58F21 947 aaPredicted RBP15.43■□□□□ 0.06
CLCN6-205ENST00000376492 GDPD5Q8WTR4 605 aa15.43■□□□□ 0.06
CLCN6-205ENST00000376492 SCFD2Q8WU76 684 aa15.43■□□□□ 0.06
CLCN6-205ENST00000376492 CTAGE1Q96RT6 745 aa15.43■□□□□ 0.06
CLCN6-205ENST00000376492 TMEM47Q9BQJ4 181 aa15.43■□□□□ 0.06
CLCN6-205ENST00000376492 TOMM22Q9NS69 142 aa15.43■□□□□ 0.06
CLCN6-205ENST00000376492 ANAPC4Q9UJX5 808 aa15.43■□□□□ 0.06
CLCN6-205ENST00000376492 NOD1Q9Y239 953 aa15.43■□□□□ 0.06
CLCN6-205ENST00000376492 COL4A4P53420 1690 aaPredicted RBP15.43■□□□□ 0.06
CLCN6-205ENST00000376492 KIF28PB7ZC32 967 aa15.42■□□□□ 0.06
CLCN6-205ENST00000376492 NKRFO15226 690 aaKnown RBP eCLIP15.42■□□□□ 0.06
CLCN6-205ENST00000376492 TXNP10599 105 aaKnown RBP15.42■□□□□ 0.06
CLCN6-205ENST00000376492 PDHBP11177 359 aa15.42■□□□□ 0.06
CLCN6-205ENST00000376492 TOP1P11387 765 aaKnown RBP15.42■□□□□ 0.06
CLCN6-205ENST00000376492 HOXD11P31277 338 aaPredicted RBP15.42■□□□□ 0.06
CLCN6-205ENST00000376492 WDR5P61964 334 aaKnown RBP15.42■□□□□ 0.06
CLCN6-205ENST00000376492 GPNMBQ14956 572 aa15.42■□□□□ 0.06
CLCN6-205ENST00000376492 PTGISQ16647 500 aa15.42■□□□□ 0.06
CLCN6-205ENST00000376492 RRP12Q5JTH9 1297 aaKnown RBP15.42■□□□□ 0.06
CLCN6-205ENST00000376492 FAM86C2PA6NEL3 165 aa15.41■□□□□ 0.06
CLCN6-205ENST00000376492 KPNA6O60684 536 aa15.41■□□□□ 0.06
CLCN6-205ENST00000376492 BAIAP3O94812 1187 aa15.41■□□□□ 0.06
CLCN6-205ENST00000376492 FGRP09769 529 aa15.41■□□□□ 0.06
CLCN6-205ENST00000376492 KCNJ6P48051 423 aa15.41■□□□□ 0.06
CLCN6-205ENST00000376492 DEFB103AP81534 67 aa15.41■□□□□ 0.06
CLCN6-205ENST00000376492 PTPN11Q06124 597 aaPredicted RBP15.41■□□□□ 0.06
CLCN6-205ENST00000376492 TCTN1Q2MV58 587 aa15.41■□□□□ 0.06
CLCN6-205ENST00000376492 GDF6Q6KF10 455 aaPredicted RBP15.41■□□□□ 0.06
CLCN6-205ENST00000376492 AFG1LQ8WV93 481 aa15.41■□□□□ 0.06
CLCN6-205ENST00000376492 DHX38Q92620 1227 aaKnown RBP15.41■□□□□ 0.06
CLCN6-205ENST00000376492 C11orf16Q9NQ32 467 aa15.41■□□□□ 0.06
CLCN6-205ENST00000376492 MTUS1Q9ULD2 1270 aa15.41■□□□□ 0.06
CLCN6-205ENST00000376492 HCN4Q9Y3Q4 1203 aa15.41■□□□□ 0.06
CLCN6-205ENST00000376492 ZNF543Q08ER8 600 aa15.4■□□□□ 0.06
CLCN6-205ENST00000376492 USH1GQ495M9 461 aa15.4■□□□□ 0.06
CLCN6-205ENST00000376492 TMEM31Q5JXX7 168 aa15.4■□□□□ 0.06
CLCN6-205ENST00000376492 DNERQ8NFT8 737 aa15.4■□□□□ 0.06
CLCN6-205ENST00000376492 CD320Q9NPF0 282 aa15.4■□□□□ 0.06
CLCN6-205ENST00000376492 TET1Q8NFU7 2136 aa15.4■□□□□ 0.06
CLCN6-205ENST00000376492 MMP3P08254 477 aa15.39■□□□□ 0.05
CLCN6-205ENST00000376492 PDE4AP27815 886 aa15.39■□□□□ 0.05
CLCN6-205ENST00000376492 ARHGAP1Q07960 439 aa15.39■□□□□ 0.05
CLCN6-205ENST00000376492 LY6KQ17RY6 165 aa15.39■□□□□ 0.05
CLCN6-205ENST00000376492 CCDC62Q6P9F0 684 aa15.39■□□□□ 0.05
CLCN6-205ENST00000376492 LRRC8DQ7L1W4 858 aa15.39■□□□□ 0.05
CLCN6-205ENST00000376492 CAGE1Q8TC20 777 aa15.39■□□□□ 0.05
CLCN6-205ENST00000376492 AFAP1L1Q8TED9 768 aa15.39■□□□□ 0.05
CLCN6-205ENST00000376492 KAT2BQ92831 832 aa15.39■□□□□ 0.05
CLCN6-205ENST00000376492 MPHOSPH6Q99547 160 aaKnown RBP15.39■□□□□ 0.05
CLCN6-205ENST00000376492 CPVLQ9H3G5 476 aa15.39■□□□□ 0.05
CLCN6-205ENST00000376492 WDR19Q8NEZ3 1342 aa15.39■□□□□ 0.05
CLCN6-205ENST00000376492 TRIM6-TRIM34B2RNG4 842 aa15.38■□□□□ 0.05
CLCN6-205ENST00000376492 NBNO60934 754 aa15.38■□□□□ 0.05
CLCN6-205ENST00000376492 FGAP02671 866 aa15.38■□□□□ 0.05
CLCN6-205ENST00000376492 GOLGA8HP0CJ92 632 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms