RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 EIF2B2P49770 351 aaKnown RBP7.17□□□□□ -1.26
UBR4-204ENST00000375254 SLC26A6Q9BXS9 759 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 GOLPH3LQ9H4A5 285 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 SLC40A1Q9NP59 571 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 ZCCHC17Q9NP64 241 aaKnown RBP7.17□□□□□ -1.26
UBR4-204ENST00000375254 SERPINB3P29508 390 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 PDE4BQ07343 736 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 DDR1Q08345 913 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 JADE1Q6IE81 842 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 SCG3Q8WXD2 468 aaKnown RBP7.17□□□□□ -1.26
UBR4-204ENST00000375254 KLHL31Q9H511 634 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 RTEL1Q9NZ71 1219 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 COPB2P35606 906 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 PRR23CQ6ZRP0 262 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 TNNC2P02585 160 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 NEK9Q8TD19 979 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 ADKP55263 362 aaKnown RBP7.17□□□□□ -1.26
UBR4-204ENST00000375254 RCN2Q14257 317 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 PCNX4Q63HM2 1172 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 TRPM8Q7Z2W7 1104 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 CACYBPQ9HB71 228 aaKnown RBP7.17□□□□□ -1.26
UBR4-204ENST00000375254 LRP2BPQ9P2M1 347 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 WARS2Q9UGM6 360 aaKnown RBP7.17□□□□□ -1.26
UBR4-204ENST00000375254 IMPDH2P12268 514 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 CDR2LQ86X02 465 aaPredicted RBP7.17□□□□□ -1.26
UBR4-204ENST00000375254 C2CD5Q86YS7 1000 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 SLF2Q8IX21 1173 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 DHX58Q96C10 678 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 NOVA2Q9UNW9 492 aaKnown RBP7.17□□□□□ -1.26
UBR4-204ENST00000375254 CHMP2BQ9UQN3 213 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 APOBEC2Q9Y235 224 aaKnown RBP7.17□□□□□ -1.26
UBR4-204ENST00000375254 GTPBP10A4D1E9 387 aaKnown RBP7.17□□□□□ -1.26
UBR4-204ENST00000375254 SCP2P22307 547 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 STX19Q8N4C7 294 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 RNF103-CHMP3A0A140T963 221 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 GOLGA8MH3BSY2 632 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 EEF1GP26641 437 aaKnown RBP7.16□□□□□ -1.26
UBR4-204ENST00000375254 SCRN3Q0VDG4 424 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 ATPIF1Q9UII2 106 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 EXOC6BQ9Y2D4 811 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.16□□□□□ -1.262e-6■■■□□ 14.9
UBR4-204ENST00000375254 TBC1D12O60347 775 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 PPIDQ08752 370 aaKnown RBP7.16□□□□□ -1.26
UBR4-204ENST00000375254 ALKBH8Q96BT7 664 aaKnown RBP7.16□□□□□ -1.26
UBR4-204ENST00000375254 OLFM1Q99784 485 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 KCNK3O14649 394 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 RTN3O95197 1032 aaPredicted RBP7.16□□□□□ -1.26
UBR4-204ENST00000375254 RPS6KB1P23443 525 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 KLHL12Q53G59 568 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 CCNI2Q6ZMN8 369 aaPredicted RBP7.16□□□□□ -1.26
UBR4-204ENST00000375254 MKNK2Q9HBH9 465 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 GNAT1P11488 350 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 GCLCP48506 637 aaPredicted RBP7.16□□□□□ -1.26
UBR4-204ENST00000375254 USH1GQ495M9 461 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 RRAGAQ7L523 313 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 CNBD1Q8NA66 436 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 TULP2O00295 520 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 ATF2P15336 505 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 EPM2AIP1Q7L775 607 aaPredicted RBP7.16□□□□□ -1.26
UBR4-204ENST00000375254 OTUD6AQ7L8S5 288 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 STKLD1Q8NE28 680 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 BRIP1Q9BX63 1249 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 RPL26L1Q9UNX3 145 aaKnown RBP7.16□□□□□ -1.26
UBR4-204ENST00000375254 USP15Q9Y4E8 981 aaPredicted RBP7.16□□□□□ -1.26
UBR4-204ENST00000375254 PFDN6O15212 129 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 PPARGP37231 505 aaPredicted RBP7.16□□□□□ -1.26
UBR4-204ENST00000375254 BPIFB4P59827 614 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 R3HDM1Q15032 1099 aaKnown RBP7.16□□□□□ -1.26
UBR4-204ENST00000375254 CEP78Q5JTW2 689 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 NBPF15Q8N660 670 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 IQCB1Q15051 598 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 ZBTB9Q96C00 473 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 METTL14Q9HCE5 456 aaKnown RBP7.16□□□□□ -1.26
UBR4-204ENST00000375254 FANCLQ9NW38 375 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 SUCLA2Q9P2R7 463 aaPredicted RBP7.16□□□□□ -1.26
UBR4-204ENST00000375254 SAC3D1A6NKF1 404 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 PGRMC1O00264 195 aaKnown RBP7.16□□□□□ -1.26
UBR4-204ENST00000375254 PDAP1Q13442 181 aaKnown RBP7.16□□□□□ -1.26
UBR4-204ENST00000375254 TTC27Q6P3X3 843 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 CDH24Q86UP0 819 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 RUSC2Q8N2Y8 1516 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 RNASE9P60153 205 aaKnown RBP7.16□□□□□ -1.26
UBR4-204ENST00000375254 AFAP1Q8N556 730 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 FLCNQ8NFG4 579 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 CYTH2Q99418 400 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 RCOR1Q9UKL0 485 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 EVPLLA8MZ36 301 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 FAM13AO94988 1023 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 SEC24BO95487 1268 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 NAF1Q96HR8 494 aaKnown RBP7.16□□□□□ -1.26
UBR4-204ENST00000375254 KRT81Q14533 505 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 ADCK5Q3MIX3 580 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 ESR2Q92731 530 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 EPC1Q9H2F5 836 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 ZFP69BQ9UJL9 534 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 SMG5Q9UPR3 1016 aaKnown RBP7.16□□□□□ -1.26
UBR4-204ENST00000375254 WBP11Q9Y2W2 641 aaKnown RBP7.16□□□□□ -1.26
UBR4-204ENST00000375254 TRAF5O00463 557 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 STAT1P42224 750 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 AGBL2Q5U5Z8 902 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms