RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 UBE2SQ16763 222 aa17.23■□□□□ 0.35
HSPG2-201ENST00000374673 MAP3K21Q5TCX8 1036 aa17.23■□□□□ 0.35
HSPG2-201ENST00000374673 GALNT17Q6IS24 598 aa17.23■□□□□ 0.35
HSPG2-201ENST00000374673 ARMCX2Q7L311 632 aa17.23■□□□□ 0.35
HSPG2-201ENST00000374673 FCHSD1Q86WN1 690 aa17.23■□□□□ 0.35
HSPG2-201ENST00000374673 DAGLBQ8NCG7 672 aa17.23■□□□□ 0.35
HSPG2-201ENST00000374673 BICD2Q8TD16 824 aa17.23■□□□□ 0.35
HSPG2-201ENST00000374673 RMDN3Q96TC7 470 aa17.23■□□□□ 0.35
HSPG2-201ENST00000374673 MPHOSPH6Q99547 160 aaKnown RBP17.23■□□□□ 0.35
HSPG2-201ENST00000374673 PHF20Q9BVI0 1012 aa17.23■□□□□ 0.35
HSPG2-201ENST00000374673 PXMP2Q9NR77 195 aa17.23■□□□□ 0.35
HSPG2-201ENST00000374673 RPTORQ8N122 1335 aa17.22■□□□□ 0.35
HSPG2-201ENST00000374673 KIAA1217Q5T5P2 1943 aa17.22■□□□□ 0.35
HSPG2-201ENST00000374673 B4DLN1 442 aa17.22■□□□□ 0.35
HSPG2-201ENST00000374673 SNAI1O95863 264 aaPredicted RBP17.22■□□□□ 0.35
HSPG2-201ENST00000374673 FOSP01100 380 aaPredicted RBP17.22■□□□□ 0.35
HSPG2-201ENST00000374673 CYP2C19P33261 490 aa17.22■□□□□ 0.35
HSPG2-201ENST00000374673 TRIM32Q13049 653 aa17.22■□□□□ 0.35
HSPG2-201ENST00000374673 NPY5RQ15761 445 aa17.22■□□□□ 0.35
HSPG2-201ENST00000374673 ARHGEF16Q5VV41 709 aa17.22■□□□□ 0.35
HSPG2-201ENST00000374673 MCTP2Q6DN12 878 aa17.22■□□□□ 0.35
HSPG2-201ENST00000374673 FAM184AQ8NB25 1140 aa17.22■□□□□ 0.35
HSPG2-201ENST00000374673 IWS1Q96ST2 819 aa17.22■□□□□ 0.35
HSPG2-201ENST00000374673 PDCD2LQ9BRP1 358 aa17.22■□□□□ 0.35
HSPG2-201ENST00000374673 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.22■□□□□ 0.35
HSPG2-201ENST00000374673 NRBP1Q9UHY1 535 aa17.22■□□□□ 0.35
HSPG2-201ENST00000374673 PCDHA4Q9UN74 947 aa17.22■□□□□ 0.35
HSPG2-201ENST00000374673 SPDYE3A6NKU9 549 aa17.21■□□□□ 0.35
HSPG2-201ENST00000374673 PRKAR2AP13861 404 aaKnown RBP17.21■□□□□ 0.35
HSPG2-201ENST00000374673 CACNB2Q08289 660 aaPredicted RBP17.21■□□□□ 0.35
HSPG2-201ENST00000374673 REXO1Q8N1G1 1221 aaKnown RBP17.21■□□□□ 0.35
HSPG2-201ENST00000374673 INTS4Q96HW7 963 aaKnown RBP17.21■□□□□ 0.35
HSPG2-201ENST00000374673 ZNF333Q96JL9 665 aa17.21■□□□□ 0.35
HSPG2-201ENST00000374673 BIN2Q9UBW5 565 aaPredicted RBP17.21■□□□□ 0.35
HSPG2-201ENST00000374673 PCDHA6Q9UN73 950 aa17.21■□□□□ 0.35
HSPG2-201ENST00000374673 KIF3AQ9Y496 699 aa17.21■□□□□ 0.35
HSPG2-201ENST00000374673 PCDHA8Q9Y5H6 950 aa17.21■□□□□ 0.35
HSPG2-201ENST00000374673 MYH7BA7E2Y1 1941 aa17.2■□□□□ 0.34
HSPG2-201ENST00000374673 FRMPD3Q5JV73 1810 aa17.2■□□□□ 0.34
HSPG2-201ENST00000374673 M0R2N6 131 aa17.2■□□□□ 0.34
HSPG2-201ENST00000374673 ADAMTS3O15072 1205 aa17.2■□□□□ 0.34
HSPG2-201ENST00000374673 CYBAP13498 195 aa17.2■□□□□ 0.34
HSPG2-201ENST00000374673 EIF2AK2P19525 551 aaKnown RBP17.2■□□□□ 0.34
HSPG2-201ENST00000374673 GJB2P29033 226 aa17.2■□□□□ 0.34
HSPG2-201ENST00000374673 PGM5Q15124 567 aa17.2■□□□□ 0.34
HSPG2-201ENST00000374673 BLIDQ8IZY5 108 aa17.2■□□□□ 0.34
HSPG2-201ENST00000374673 ANO3Q9BYT9 981 aa17.2■□□□□ 0.34
HSPG2-201ENST00000374673 KATNBL1Q9H079 304 aa17.2■□□□□ 0.34
HSPG2-201ENST00000374673 ABHD16BQ9H3Z7 469 aa17.2■□□□□ 0.34
HSPG2-201ENST00000374673 EHMT1Q9H9B1 1298 aa17.2■□□□□ 0.34
HSPG2-201ENST00000374673 GJB4Q9NTQ9 266 aa17.2■□□□□ 0.34
HSPG2-201ENST00000374673 KCNJ14Q9UNX9 436 aa17.2■□□□□ 0.34
HSPG2-201ENST00000374673 SMC3Q9UQE7 1217 aa17.2■□□□□ 0.34
HSPG2-201ENST00000374673 CNPY2Q9Y2B0 182 aa17.2■□□□□ 0.34
HSPG2-201ENST00000374673 MMP1P03956 469 aa17.19■□□□□ 0.34
HSPG2-201ENST00000374673 NR3C2P08235 984 aa17.19■□□□□ 0.34
HSPG2-201ENST00000374673 PDE4DQ08499 809 aa17.19■□□□□ 0.34
HSPG2-201ENST00000374673 TRIM29Q14134 588 aa17.19■□□□□ 0.34
HSPG2-201ENST00000374673 JAKMIP3Q5VZ66 844 aa17.19■□□□□ 0.34
HSPG2-201ENST00000374673 KRT40Q6A162 431 aa17.19■□□□□ 0.34
HSPG2-201ENST00000374673 C8orf76Q96K31 380 aa17.19■□□□□ 0.34
HSPG2-201ENST00000374673 VTA1Q9NP79 307 aa17.19■□□□□ 0.34
HSPG2-201ENST00000374673 TMEM260Q9NX78 707 aa17.19■□□□□ 0.34
HSPG2-201ENST00000374673 DDX49Q9Y6V7 483 aaKnown RBP17.19■□□□□ 0.34
HSPG2-201ENST00000374673 ZNF865P0CJ78 1059 aaPredicted RBP17.18■□□□□ 0.34
HSPG2-201ENST00000374673 ACVR2BQ13705 512 aa17.18■□□□□ 0.34
HSPG2-201ENST00000374673 STXBP2Q15833 593 aa17.18■□□□□ 0.34
HSPG2-201ENST00000374673 PRAMEF19Q5SWL8 479 aa17.18■□□□□ 0.34
HSPG2-201ENST00000374673 VSIG10LQ86VR7 867 aa17.18■□□□□ 0.34
HSPG2-201ENST00000374673 TRPV1Q8NER1 839 aa17.18■□□□□ 0.34
HSPG2-201ENST00000374673 IL31RAQ8NI17 732 aa17.18■□□□□ 0.34
HSPG2-201ENST00000374673 RASGRP4Q8TDF6 673 aa17.18■□□□□ 0.34
HSPG2-201ENST00000374673 HMX1Q9NP08 348 aaPredicted RBP17.18■□□□□ 0.34
HSPG2-201ENST00000374673 STAM2O75886 525 aa17.17■□□□□ 0.34
HSPG2-201ENST00000374673 CCND2P30279 289 aa17.17■□□□□ 0.34
HSPG2-201ENST00000374673 CCND3P30281 292 aaPredicted RBP17.17■□□□□ 0.34
HSPG2-201ENST00000374673 KRT2P35908 639 aa17.17■□□□□ 0.34
HSPG2-201ENST00000374673 SREBF1P36956 1147 aa17.17■□□□□ 0.34
HSPG2-201ENST00000374673 FOSBP53539 338 aa17.17■□□□□ 0.34
HSPG2-201ENST00000374673 MTFR1Q15390 333 aa17.17■□□□□ 0.34
HSPG2-201ENST00000374673 PCNX4Q63HM2 1172 aa17.17■□□□□ 0.34
HSPG2-201ENST00000374673 XRRA1Q6P2D8 792 aa17.17■□□□□ 0.34
HSPG2-201ENST00000374673 FBXO16Q8IX29 292 aaPredicted RBP17.17■□□□□ 0.34
HSPG2-201ENST00000374673 FBXO18Q8NFZ0 1043 aa17.17■□□□□ 0.34
HSPG2-201ENST00000374673 PGBD1Q96JS3 809 aa17.17■□□□□ 0.34
HSPG2-201ENST00000374673 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.17■□□□□ 0.34
HSPG2-201ENST00000374673 UNC93B1Q9H1C4 597 aa17.17■□□□□ 0.34
HSPG2-201ENST00000374673 BRMS1Q9HCU9 246 aa17.17■□□□□ 0.34
HSPG2-201ENST00000374673 ZHX1Q9UKY1 873 aaPredicted RBP17.17■□□□□ 0.34
HSPG2-201ENST00000374673 HTTP42858 3142 aa17.16■□□□□ 0.34
HSPG2-201ENST00000374673 SEPT4O43236 478 aa17.16■□□□□ 0.34
HSPG2-201ENST00000374673 EIF3JO75822 258 aaKnown RBP17.16■□□□□ 0.34
HSPG2-201ENST00000374673 MYCLP12524 364 aaPredicted RBP17.16■□□□□ 0.34
HSPG2-201ENST00000374673 CCL5P13501 91 aa17.16■□□□□ 0.34
HSPG2-201ENST00000374673 MRPS9P82933 396 aaKnown RBP17.16■□□□□ 0.34
HSPG2-201ENST00000374673 TAPT1Q6NXT6 567 aa17.16■□□□□ 0.34
HSPG2-201ENST00000374673 EEPD1Q7L9B9 569 aa17.16■□□□□ 0.34
HSPG2-201ENST00000374673 CRYGNQ8WXF5 182 aa17.16■□□□□ 0.34
HSPG2-201ENST00000374673 PAK6Q9NQU5 681 aaPredicted RBP17.16■□□□□ 0.34
HSPG2-201ENST00000374673 RBM47A0AV96 593 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms