RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 LMNB1P20700 586 aa15.5■□□□□ 0.07
LMX1B-202ENST00000373474 SF3A3Q12874 501 aaKnown RBP eCLIP15.5■□□□□ 0.07
LMX1B-202ENST00000373474 IRX5P78411 483 aaPredicted RBP15.5■□□□□ 0.07
LMX1B-202ENST00000373474 EHHADHQ08426 723 aa15.5■□□□□ 0.07
LMX1B-202ENST00000373474 PTPN21Q16825 1174 aa15.5■□□□□ 0.07
LMX1B-202ENST00000373474 NSMFQ6X4W1 530 aa15.5■□□□□ 0.07
LMX1B-202ENST00000373474 FAM178BQ8IXR5 827 aa15.5■□□□□ 0.07
LMX1B-202ENST00000373474 PALM2Q8IXS6 379 aa15.5■□□□□ 0.07
LMX1B-202ENST00000373474 SCOCQ9UIL1 159 aa15.5■□□□□ 0.07
LMX1B-202ENST00000373474 PTPROQ16827 1216 aa15.49■□□□□ 0.07
LMX1B-202ENST00000373474 SUN1O94901 812 aa15.49■□□□□ 0.07
LMX1B-202ENST00000373474 IFNAR1P17181 557 aa15.49■□□□□ 0.07
LMX1B-202ENST00000373474 BBOF1Q8ND07 529 aa15.49■□□□□ 0.07
LMX1B-202ENST00000373474 PAGE5Q96GU1 130 aa15.49■□□□□ 0.07
LMX1B-202ENST00000373474 RIC8AQ9NPQ8 531 aa15.49■□□□□ 0.07
LMX1B-202ENST00000373474 SAMSN1Q9NSI8 373 aaKnown RBP15.49■□□□□ 0.07
LMX1B-202ENST00000373474 CROCC2H7BZ55 1655 aa15.49■□□□□ 0.07
LMX1B-202ENST00000373474 P4HA1P13674 534 aa15.49■□□□□ 0.07
LMX1B-202ENST00000373474 ESRRGP62508 458 aa15.49■□□□□ 0.07
LMX1B-202ENST00000373474 MAN2A1Q16706 1144 aa15.49■□□□□ 0.07
LMX1B-202ENST00000373474 ASPRV1Q53RT3 343 aa15.49■□□□□ 0.07
LMX1B-202ENST00000373474 SDCCAG3Q96C92 435 aa15.49■□□□□ 0.07
LMX1B-202ENST00000373474 ZNF804BA4D1E1 1349 aa15.49■□□□□ 0.07
LMX1B-202ENST00000373474 MYL7Q01449 175 aa15.49■□□□□ 0.07
LMX1B-202ENST00000373474 TOB2Q14106 344 aaPredicted RBP15.49■□□□□ 0.07
LMX1B-202ENST00000373474 ACRBPQ8NEB7 543 aa15.49■□□□□ 0.07
LMX1B-202ENST00000373474 GLI2P10070 1586 aa15.49■□□□□ 0.07
LMX1B-202ENST00000373474 DEPTORQ8TB45 409 aa15.49■□□□□ 0.07
LMX1B-202ENST00000373474 GJA3Q9Y6H8 435 aa15.49■□□□□ 0.07
LMX1B-202ENST00000373474 PASKQ96RG2 1323 aa15.49■□□□□ 0.07
LMX1B-202ENST00000373474 FAM170AA1A519 330 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 hCG_1984214I3L0E3 225 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 ATF2P15336 505 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 PHEXP78562 749 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 C2orf54Q08AI8 447 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 CERKLQ49MI3 558 aaPredicted RBP15.48■□□□□ 0.07
LMX1B-202ENST00000373474 RESP18Q5W5W9 173 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 ARMC9Q7Z3E5 817 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 LCORLQ8N3X6 602 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 ZNF713Q8N859 430 aaPredicted RBP15.48■□□□□ 0.07
LMX1B-202ENST00000373474 CCDC197Q8NCU1 140 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 CACYBPQ9HB71 228 aaKnown RBP15.48■□□□□ 0.07
LMX1B-202ENST00000373474 C1orf112Q9NSG2 853 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 SLAIN2Q9P270 581 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 CDC42BPGQ6DT37 1551 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 QRICH2Q9H0J4 1663 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 SOS2Q07890 1332 aaPredicted RBP15.48■□□□□ 0.07
LMX1B-202ENST00000373474 WDR46O15213 610 aaKnown RBP15.48■□□□□ 0.07
LMX1B-202ENST00000373474 THAP12O43422 761 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 CLCN6P51797 869 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 FBXO41Q8TF61 875 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 PARD6BQ9BYG5 372 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 ACTR5Q9H9F9 607 aaPredicted RBP15.48■□□□□ 0.07
LMX1B-202ENST00000373474 KIAA1024Q9UPX6 916 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 GOLGA8QA0A0J9YX86 632 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 GOLGA8OA6NCC3 632 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 GOLGA8NF8WBI6 632 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 HOXA7P31268 230 aaPredicted RBP15.48■□□□□ 0.07
LMX1B-202ENST00000373474 ARHGAP4P98171 946 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 KAT6BQ8WYB5 2073 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 STAM2O75886 525 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 ABCC3O15438 1527 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 NCAPD2Q15021 1401 aa15.48■□□□□ 0.07
LMX1B-202ENST00000373474 H0YCG3 227 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 ARHGEF16Q5VV41 709 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 NHEJ1Q9H9Q4 299 aaPredicted RBP15.47■□□□□ 0.07
LMX1B-202ENST00000373474 ZC4H2Q9NQZ6 224 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 SCINQ9Y6U3 715 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 AFPP02771 609 aaKnown RBP15.47■□□□□ 0.07
LMX1B-202ENST00000373474 CCT5P48643 541 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 DYNLL1P63167 89 aaKnown RBP15.47■□□□□ 0.07
LMX1B-202ENST00000373474 CASC4Q6P4E1 433 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 KRT26Q7Z3Y9 468 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 PLA2G4DQ86XP0 818 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 STK17AQ9UEE5 414 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 CLEC11AQ9Y240 323 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 ANKARQ7Z5J8 1434 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 PRR36Q9H6K5 1346 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 FOSP01100 380 aaPredicted RBP15.47■□□□□ 0.07
LMX1B-202ENST00000373474 IL6STP40189 918 aaPredicted RBP15.47■□□□□ 0.07
LMX1B-202ENST00000373474 LIG4P49917 911 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 NR5A1Q13285 461 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 LARGE2Q8N3Y3 721 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 CA8P35219 290 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 DLGAP5Q15398 846 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 ADAT2Q7Z6V5 191 aaKnown RBP15.47■□□□□ 0.07
LMX1B-202ENST00000373474 ANKRD13CQ8N6S4 541 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 PCDHB6Q9Y5E3 794 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 SESN3P58005 492 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 HADHQ16836 314 aaKnown RBP15.47■□□□□ 0.07
LMX1B-202ENST00000373474 TTC19Q6DKK2 380 aaPredicted RBP15.47■□□□□ 0.07
LMX1B-202ENST00000373474 RASGRP4Q8TDF6 673 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 BPIFA3Q9BQP9 254 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 JRKLQ9Y4A0 524 aa15.47■□□□□ 0.07
LMX1B-202ENST00000373474 LIFRP42702 1097 aa15.46■□□□□ 0.07
LMX1B-202ENST00000373474 CRKLP46109 303 aaKnown RBP15.46■□□□□ 0.07
LMX1B-202ENST00000373474 ARMCX5Q6P1M9 558 aa15.46■□□□□ 0.07
LMX1B-202ENST00000373474 AFG3L2Q9Y4W6 797 aa15.46■□□□□ 0.07
LMX1B-202ENST00000373474 CCDC151A5D8V7 595 aa15.46■□□□□ 0.07
LMX1B-202ENST00000373474 PRKAB2O43741 272 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms