RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 BHMG1C9JSJ3 638 aaPredicted RBP7.19□□□□□ -1.26
CHD6-202ENST00000373222 RPS6KA4O75676 772 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 HSD3B2P26439 372 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 MAPK1P28482 360 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 PBX1P40424 430 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 PRCPP42785 496 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 RCAN1P53805 252 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 EIF6P56537 245 aaKnown RBP7.19□□□□□ -1.26
CHD6-202ENST00000373222 DHX8Q14562 1220 aaKnown RBP7.19□□□□□ -1.26
CHD6-202ENST00000373222 KRT31Q15323 416 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 CRTC2Q53ET0 693 aaPredicted RBP7.19□□□□□ -1.26
CHD6-202ENST00000373222 C12orf60Q5U649 245 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 SPATA1Q5VX52 437 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 USP17L2Q6R6M4 530 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 KIFC2Q96AC6 838 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 MTA3Q9BTC8 594 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 KAT14Q9H8E8 782 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 LRRC4BQ9NT99 713 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 RBM28Q9NW13 759 aaKnown RBP7.19□□□□□ -1.26
CHD6-202ENST00000373222 TRIM10Q9UDY6 481 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 HOOK1Q9UJC3 728 aaKnown RBP7.19□□□□□ -1.26
CHD6-202ENST00000373222 MAST2Q6P0Q8 1798 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 ADAMTSL1Q8N6G6 1762 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 TADA3O75528 432 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 H2AFXP16104 143 aaPredicted RBP7.18□□□□□ -1.26
CHD6-202ENST00000373222 ATP2B4P23634 1241 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 KCNJ6P48051 423 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 ERVK-24P63145 666 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 FOXK1P85037 733 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 RNF187Q5TA31 235 aaPredicted RBP7.18□□□□□ -1.26
CHD6-202ENST00000373222 TPTE2Q6XPS3 522 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 IRF2BP1Q8IU81 584 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 FMNL3Q8IVF7 1028 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 BLIDQ8IZY5 108 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 CLP1Q92989 425 aaKnown RBP7.18□□□□□ -1.26
CHD6-202ENST00000373222 GJA10Q969M2 543 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 GMLQ99445 158 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 MKNK2Q9HBH9 465 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 ATP8A2Q9NTI2 1148 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 OGFRQ9NZT2 677 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 PHLPP2Q6ZVD8 1323 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 CNTNAP4Q9C0A0 1308 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 C2orf72A6NCS6 295 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 STX10O60499 249 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 LDHBP07195 334 aaKnown RBP7.18□□□□□ -1.26
CHD6-202ENST00000373222 TSPY3P0CV98 308 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 TSPY8P0CW00 308 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 RASA1P20936 1047 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 KLK7P49862 253 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 GPSM2P81274 684 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 EAPPQ56P03 285 aaPredicted RBP7.18□□□□□ -1.26
CHD6-202ENST00000373222 TEX35Q5T0J7 233 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 FAM196AQ6ZSG2 479 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 CCDC12Q8WUD4 166 aaPredicted RBP7.18□□□□□ -1.26
CHD6-202ENST00000373222 FERMT2Q96AC1 680 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 RPS6KC1Q96S38 1066 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 CHP1Q99653 195 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 TMEM47Q9BQJ4 181 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 MXD3Q9BW11 206 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 BRMS1Q9HCU9 246 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 DDX56Q9NY93 547 aaKnown RBP7.18□□□□□ -1.26
CHD6-202ENST00000373222 ARPP21Q9UBL0 812 aaPredicted RBP7.18□□□□□ -1.26
CHD6-202ENST00000373222 PCDHA6Q9UN73 950 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 RTCBQ9Y3I0 505 aaKnown RBP7.18□□□□□ -1.26
CHD6-202ENST00000373222 PCDHA8Q9Y5H6 950 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 FHOD1Q9Y613 1164 aa7.18□□□□□ -1.26
CHD6-202ENST00000373222 SMCHD1A6NHR9 2005 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 AKR1B15C9JRZ8 316 aaPredicted RBP7.17□□□□□ -1.26
CHD6-202ENST00000373222 F8W031 263 aaPredicted RBP7.17□□□□□ -1.26
CHD6-202ENST00000373222 M0R2N6 131 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 PIK3CDO00329 1044 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 MFAP3LO75121 409 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 SASH3O75995 380 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 CALM1P0DP23 149 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 CALM2P0DP24 149 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 CALM3P0DP25 149 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 ZNF211Q13398 564 aaPredicted RBP7.17□□□□□ -1.26
CHD6-202ENST00000373222 ELOA2Q8IYF1 753 aaPredicted RBP7.17□□□□□ -1.26
CHD6-202ENST00000373222 TRIML1Q8N9V2 468 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 NELFBQ8WX92 580 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 FAM161BQ96MY7 647 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 GSDMAQ96QA5 445 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 TGIF2Q9GZN2 237 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 TMEM260Q9NX78 707 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 PUF60Q9UHX1 559 aaKnown RBP7.17□□□□□ -1.26
CHD6-202ENST00000373222 ADGRG1Q9Y653 693 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 MORC2Q9Y6X9 1032 aaPredicted RBP7.17□□□□□ -1.26
CHD6-202ENST00000373222 LTBP4Q8N2S1 1624 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 SNED1Q8TER0 1413 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 MOXD2PA6NHM9 499 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 H3BRB1 525 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 KIF2AO00139 706 aaPredicted RBP7.17□□□□□ -1.26
CHD6-202ENST00000373222 PES1O00541 588 aaKnown RBP7.17□□□□□ -1.26
CHD6-202ENST00000373222 N4BP3O15049 544 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 NRDCO43847 1150 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 LZTS3O60299 673 aaPredicted RBP7.17□□□□□ -1.26
CHD6-202ENST00000373222 RPN1P04843 607 aaKnown RBP7.17□□□□□ -1.26
CHD6-202ENST00000373222 CASQ1P31415 396 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 STAT6P42226 847 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 BTDP43251 543 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms