RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 TXNP10599 105 aaKnown RBP15.37■□□□□ 0.05
TRAPPC3-201ENST00000373159 FAM47CQ5HY64 1035 aa15.37■□□□□ 0.05
TRAPPC3-201ENST00000373159 MFSD6Q6ZSS7 791 aa15.37■□□□□ 0.05
TRAPPC3-201ENST00000373159 UHRF1Q96T88 793 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC3-201ENST00000373159 BMP1P13497 986 aa15.36■□□□□ 0.05
TRAPPC3-201ENST00000373159 BFSP2Q13515 415 aa15.36■□□□□ 0.05
TRAPPC3-201ENST00000373159 GPATCH4Q5T3I0 446 aaKnown RBP15.36■□□□□ 0.05
TRAPPC3-201ENST00000373159 IL27Q8NEV9 243 aa15.36■□□□□ 0.05
TRAPPC3-201ENST00000373159 COPS5Q92905 334 aa15.36■□□□□ 0.05
TRAPPC3-201ENST00000373159 SLC9A7Q96T83 725 aa15.36■□□□□ 0.05
TRAPPC3-201ENST00000373159 LRRC37A2A6NM11 1700 aa15.36■□□□□ 0.05
TRAPPC3-201ENST00000373159 PRRC2BQ5JSZ5 2229 aaKnown RBP15.36■□□□□ 0.05
TRAPPC3-201ENST00000373159 CA3P07451 260 aa15.35■□□□□ 0.05
TRAPPC3-201ENST00000373159 COL9A1P20849 921 aa15.35■□□□□ 0.05
TRAPPC3-201ENST00000373159 NT5C2P49902 561 aa15.35■□□□□ 0.05
TRAPPC3-201ENST00000373159 HAND2P61296 217 aa15.35■□□□□ 0.05
TRAPPC3-201ENST00000373159 NMIQ13287 307 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC3-201ENST00000373159 HDAC1Q13547 482 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC3-201ENST00000373159 CCDC62Q6P9F0 684 aa15.35■□□□□ 0.05
TRAPPC3-201ENST00000373159 ZNF589Q86UQ0 364 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC3-201ENST00000373159 DGKHQ86XP1 1220 aa15.35■□□□□ 0.05
TRAPPC3-201ENST00000373159 RNF41Q9H4P4 317 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC3-201ENST00000373159 MTCH2Q9Y6C9 303 aa15.35■□□□□ 0.05
TRAPPC3-201ENST00000373159 LCTP09848 1927 aa15.35■□□□□ 0.05
TRAPPC3-201ENST00000373159 ARIH2O95376 493 aa15.34■□□□□ 0.05
TRAPPC3-201ENST00000373159 AAK1Q2M2I8 961 aa15.34■□□□□ 0.05
TRAPPC3-201ENST00000373159 ESR2Q92731 530 aa15.34■□□□□ 0.05
TRAPPC3-201ENST00000373159 FTOQ9C0B1 505 aaKnown RBP eCLIP15.34■□□□□ 0.055e-6■■■□□ 14.7
TRAPPC3-201ENST00000373159 SCN10AQ9Y5Y9 1956 aa15.34■□□□□ 0.05
TRAPPC3-201ENST00000373159 CCDC171Q6TFL3 1326 aa15.34■□□□□ 0.05
TRAPPC3-201ENST00000373159 KIF28PB7ZC32 967 aa15.33■□□□□ 0.04
TRAPPC3-201ENST00000373159 RFXAPO00287 272 aa15.33■□□□□ 0.04
TRAPPC3-201ENST00000373159 GTPBP6O43824 516 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC3-201ENST00000373159 BAIAP3O94812 1187 aa15.33■□□□□ 0.04
TRAPPC3-201ENST00000373159 GOLGA8HP0CJ92 632 aa15.33■□□□□ 0.04
TRAPPC3-201ENST00000373159 CCDC178Q5BJE1 867 aa15.33■□□□□ 0.04
TRAPPC3-201ENST00000373159 SESTD1Q86VW0 696 aa15.33■□□□□ 0.04
TRAPPC3-201ENST00000373159 TBC1D10CQ8IV04 446 aa15.33■□□□□ 0.04
TRAPPC3-201ENST00000373159 HERC6Q8IVU3 1022 aa15.33■□□□□ 0.04
TRAPPC3-201ENST00000373159 MICALL1Q8N3F8 863 aa15.33■□□□□ 0.04
TRAPPC3-201ENST00000373159 PPP1R13LQ8WUF5 828 aa15.33■□□□□ 0.04
TRAPPC3-201ENST00000373159 TBC1D5Q92609 795 aa15.33■□□□□ 0.04
TRAPPC3-201ENST00000373159 ANKS1AQ92625 1134 aa15.33■□□□□ 0.04
TRAPPC3-201ENST00000373159 IWS1Q96ST2 819 aa15.33■□□□□ 0.04
TRAPPC3-201ENST00000373159 UBA5Q9GZZ9 404 aa15.33■□□□□ 0.04
TRAPPC3-201ENST00000373159 NOD1Q9Y239 953 aa15.33■□□□□ 0.04
TRAPPC3-201ENST00000373159 TRANK1O15050 2925 aa15.32■□□□□ 0.04
TRAPPC3-201ENST00000373159 GH1P01241 217 aa15.32■□□□□ 0.04
TRAPPC3-201ENST00000373159 MFAP1P55081 439 aaKnown RBP15.32■□□□□ 0.04
TRAPPC3-201ENST00000373159 TFF2Q03403 129 aa15.32■□□□□ 0.04
TRAPPC3-201ENST00000373159 TAP1Q03518 808 aa15.32■□□□□ 0.04
TRAPPC3-201ENST00000373159 PTGISQ16647 500 aa15.32■□□□□ 0.04
TRAPPC3-201ENST00000373159 USH1GQ495M9 461 aa15.32■□□□□ 0.04
TRAPPC3-201ENST00000373159 MCF2L2Q86YR7 1114 aa15.32■□□□□ 0.04
TRAPPC3-201ENST00000373159 CCDC155Q8N6L0 562 aa15.32■□□□□ 0.04
TRAPPC3-201ENST00000373159 CAGE1Q8TC20 777 aa15.32■□□□□ 0.04
TRAPPC3-201ENST00000373159 SYTL5Q8TDW5 730 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC3-201ENST00000373159 NSUN6Q8TEA1 469 aaKnown RBP15.32■□□□□ 0.04
TRAPPC3-201ENST00000373159 AFG1LQ8WV93 481 aa15.32■□□□□ 0.04
TRAPPC3-201ENST00000373159 TAAR1Q96RJ0 339 aa15.32■□□□□ 0.04
TRAPPC3-201ENST00000373159 CTAGE1Q96RT6 745 aa15.32■□□□□ 0.04
TRAPPC3-201ENST00000373159 CERS4Q9HA82 394 aa15.32■□□□□ 0.04
TRAPPC3-201ENST00000373159 EPOPA6NHQ4 379 aa15.31■□□□□ 0.04
TRAPPC3-201ENST00000373159 ZNF213O14771 459 aa15.31■□□□□ 0.04
TRAPPC3-201ENST00000373159 MMP3P08254 477 aa15.31■□□□□ 0.04
TRAPPC3-201ENST00000373159 CASTP20810 708 aaKnown RBP15.31■□□□□ 0.04
TRAPPC3-201ENST00000373159 RRP1P56182 461 aaKnown RBP15.31■□□□□ 0.04
TRAPPC3-201ENST00000373159 GPNMBQ14956 572 aa15.31■□□□□ 0.04
TRAPPC3-201ENST00000373159 SKIV2LQ15477 1246 aaKnown RBP15.31■□□□□ 0.04
TRAPPC3-201ENST00000373159 STXBP2Q15833 593 aa15.31■□□□□ 0.04
TRAPPC3-201ENST00000373159 CDC37Q16543 378 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC3-201ENST00000373159 LY6KQ17RY6 165 aa15.31■□□□□ 0.04
TRAPPC3-201ENST00000373159 SEPT14Q6ZU15 432 aa15.31■□□□□ 0.04
TRAPPC3-201ENST00000373159 ADGRF4Q8IZF3 695 aa15.31■□□□□ 0.04
TRAPPC3-201ENST00000373159 PNMA1Q8ND90 353 aa15.31■□□□□ 0.04
TRAPPC3-201ENST00000373159 AFAP1L1Q8TED9 768 aa15.31■□□□□ 0.04
TRAPPC3-201ENST00000373159 KAT2BQ92831 832 aa15.31■□□□□ 0.04
TRAPPC3-201ENST00000373159 ZKSCAN3Q9BRR0 538 aa15.31■□□□□ 0.04
TRAPPC3-201ENST00000373159 CPVLQ9H3G5 476 aa15.31■□□□□ 0.04
TRAPPC3-201ENST00000373159 COG5Q9UP83 839 aa15.31■□□□□ 0.04
TRAPPC3-201ENST00000373159 ABCB11O95342 1321 aa15.31■□□□□ 0.04
TRAPPC3-201ENST00000373159 XIRP2A4UGR9 3374 aa15.3■□□□□ 0.04
TRAPPC3-201ENST00000373159 TRIM6-TRIM34B2RNG4 842 aa15.3■□□□□ 0.04
TRAPPC3-201ENST00000373159 ARHGEF15O94989 841 aa15.3■□□□□ 0.04
TRAPPC3-201ENST00000373159 PARNO95453 639 aaKnown RBP15.3■□□□□ 0.04
TRAPPC3-201ENST00000373159 SELPP16109 830 aa15.3■□□□□ 0.04
TRAPPC3-201ENST00000373159 SDSP20132 328 aa15.3■□□□□ 0.04
TRAPPC3-201ENST00000373159 NEDD4P46934 1319 aa15.3■□□□□ 0.04
TRAPPC3-201ENST00000373159 CHMP4BP1P59074 171 aa15.3■□□□□ 0.04
TRAPPC3-201ENST00000373159 ARHGAP1Q07960 439 aa15.3■□□□□ 0.04
TRAPPC3-201ENST00000373159 RBL2Q08999 1139 aa15.3■□□□□ 0.04
TRAPPC3-201ENST00000373159 GDF6Q6KF10 455 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC3-201ENST00000373159 IQCA1Q86XH1 822 aa15.3■□□□□ 0.04
TRAPPC3-201ENST00000373159 ARNTL2Q8WYA1 636 aa15.3■□□□□ 0.04
TRAPPC3-201ENST00000373159 RILPL2Q969X0 211 aa15.3■□□□□ 0.04
TRAPPC3-201ENST00000373159 CRBNQ96SW2 442 aa15.3■□□□□ 0.04
TRAPPC3-201ENST00000373159 RMDN3Q96TC7 470 aa15.3■□□□□ 0.04
TRAPPC3-201ENST00000373159 COL20A1Q9P218 1284 aa15.3■□□□□ 0.04
TRAPPC3-201ENST00000373159 GBF1Q92538 1859 aa15.29■□□□□ 0.04
TRAPPC3-201ENST00000373159 TLL1O43897 1013 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms