RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 NDST4Q9H3R1 872 aa12.09□□□□□ -0.47
LCN2-202ENST00000372998 SH2D4AQ9H788 454 aa12.09□□□□□ -0.47
LCN2-202ENST00000372998 ZCCHC17Q9NP64 241 aaKnown RBP12.09□□□□□ -0.47
LCN2-202ENST00000372998 IL17RBQ9NRM6 502 aa12.09□□□□□ -0.47
LCN2-202ENST00000372998 LRWD1Q9UFC0 647 aa12.09□□□□□ -0.47
LCN2-202ENST00000372998 HPCAL4Q9UM19 191 aa12.09□□□□□ -0.47
LCN2-202ENST00000372998 PCDHA13Q9Y5I0 950 aa12.09□□□□□ -0.47
LCN2-202ENST00000372998 A0A0G2JS52 829 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 TRIM49BA6NDI0 452 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 TULP1O00294 542 aaPredicted RBP12.08□□□□□ -0.48
LCN2-202ENST00000372998 NMT2O60551 498 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 RNF40O75150 1001 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 ATP1A1P05023 1023 aaKnown RBP12.08□□□□□ -0.48
LCN2-202ENST00000372998 USP17L8P0C7I0 530 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 ATP2B4P23634 1241 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 PRDX5P30044 214 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 CDC25AP30304 524 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 MAGEA1P43355 309 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 IRX5P78411 483 aaPredicted RBP12.08□□□□□ -0.48
LCN2-202ENST00000372998 TXNRD1Q16881 649 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 LETM2Q2VYF4 491 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 SLC9C1Q4G0N8 1177 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 CFAP221Q4G0U5 840 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 PPP4R3AQ6IN85 833 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 CACNA2D4Q7Z3S7 1137 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 SRLQ86TD4 932 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 FMNL3Q8IVF7 1028 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 IFT20Q8IY31 132 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 MARCH10Q8NA82 808 aaPredicted RBP12.08□□□□□ -0.48
LCN2-202ENST00000372998 LARP4BQ92615 738 aaKnown RBP12.08□□□□□ -0.48
LCN2-202ENST00000372998 TMEM60Q9H2L4 133 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 RIOX1Q9H6W3 641 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 EFCC1Q9HA90 598 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 STX8Q9UNK0 236 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 MAPK8IP1Q9UQF2 711 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 SUGT1Q9Y2Z0 365 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 FOCADQ5VW36 1801 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 KIF13BQ9NQT8 1826 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 DDX60LQ5H9U9 1706 aaKnown RBP12.08□□□□□ -0.48
LCN2-202ENST00000372998 CDK5RAP2Q96SN8 1893 aa12.08□□□□□ -0.48
LCN2-202ENST00000372998 SBF2Q86WG5 1849 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 GOLGA6BA6NDN3 693 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 RNF225M0QZC1 329 aaPredicted RBP12.07□□□□□ -0.48
LCN2-202ENST00000372998 HSF2BPO75031 334 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 SERPING1P05155 500 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 CYP2D6P10635 497 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 EPB41P11171 864 aaKnown RBP12.07□□□□□ -0.48
LCN2-202ENST00000372998 RASA1P20936 1047 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 ADCY7P51828 1080 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 KIF11P52732 1056 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 FKBP3Q00688 224 aaKnown RBP12.07□□□□□ -0.48
LCN2-202ENST00000372998 GRAPQ13588 217 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 DNAJC21Q5F1R6 531 aaKnown RBP12.07□□□□□ -0.48
LCN2-202ENST00000372998 MIIPQ5JXC2 388 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 TMC4Q7Z404 712 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 CCDC65Q8IXS2 484 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 MYOCDQ8IZQ8 938 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 STAG2Q8N3U4 1231 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 C1orf131Q8NDD1 294 aaKnown RBP12.07□□□□□ -0.48
LCN2-202ENST00000372998 GRAPLQ8TC17 118 aaPredicted RBP12.07□□□□□ -0.48
LCN2-202ENST00000372998 PPM1EQ8WY54 764 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 CAVIN3Q969G5 261 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 MMS19Q96T76 1030 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 EYA3Q99504 573 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 FAM204AQ9H8W3 233 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 CEP72Q9P209 647 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 SWAP70Q9UH65 585 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 SIK3Q9Y2K2 1263 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 RRP15Q9Y3B9 282 aaKnown RBP12.07□□□□□ -0.48
LCN2-202ENST00000372998 BZW2Q9Y6E2 419 aaKnown RBP12.07□□□□□ -0.48
LCN2-202ENST00000372998 IRS2Q9Y4H2 1338 aa12.07□□□□□ -0.48
LCN2-202ENST00000372998 TAF1P21675 1872 aa12.06□□□□□ -0.48
LCN2-202ENST00000372998 GPR75-ASB3A0A0A6YYF3 556 aa12.06□□□□□ -0.48
LCN2-202ENST00000372998 SHTN1A0MZ66 631 aa12.06□□□□□ -0.48
LCN2-202ENST00000372998 SRRM3A6NNA2 597 aaPredicted RBP12.06□□□□□ -0.48
LCN2-202ENST00000372998 LRRIQ3A6PVS8 624 aaPredicted RBP12.06□□□□□ -0.48
LCN2-202ENST00000372998 RBAK-RBAKDNI3L0D1 243 aa12.06□□□□□ -0.48
LCN2-202ENST00000372998 SHOX2O60902 331 aaPredicted RBP12.06□□□□□ -0.48
LCN2-202ENST00000372998 MAGEA9P43362 315 aa12.06□□□□□ -0.48
LCN2-202ENST00000372998 MRPL12P52815 198 aaKnown RBP12.06□□□□□ -0.48
LCN2-202ENST00000372998 PMS1P54277 932 aaKnown RBP12.06□□□□□ -0.48
LCN2-202ENST00000372998 MARSP56192 900 aaKnown RBP12.06□□□□□ -0.48
LCN2-202ENST00000372998 TBC1D9BQ66K14 1250 aa12.06□□□□□ -0.48
LCN2-202ENST00000372998 EFCAB13Q8IY85 973 aa12.06□□□□□ -0.48
LCN2-202ENST00000372998 TBCKQ8TEA7 893 aa12.06□□□□□ -0.48
LCN2-202ENST00000372998 SH3RF3Q8TEJ3 882 aaPredicted RBP12.06□□□□□ -0.48
LCN2-202ENST00000372998 AENQ8WTP8 325 aaKnown RBP12.06□□□□□ -0.48
LCN2-202ENST00000372998 RAD54LQ92698 747 aa12.06□□□□□ -0.48
LCN2-202ENST00000372998 ACSBG1Q96GR2 724 aa12.06□□□□□ -0.48
LCN2-202ENST00000372998 MTMR9Q96QG7 549 aa12.06□□□□□ -0.48
LCN2-202ENST00000372998 SELENOOQ9BVL4 669 aa12.06□□□□□ -0.48
LCN2-202ENST00000372998 TFCP2L1Q9NZI6 479 aa12.06□□□□□ -0.48
LCN2-202ENST00000372998 DAAM1Q9Y4D1 1078 aa12.06□□□□□ -0.48
LCN2-202ENST00000372998 GOLGA6CA6NDK9 693 aa12.05□□□□□ -0.48
LCN2-202ENST00000372998 BTNL10A8MVZ5 291 aa12.05□□□□□ -0.48
LCN2-202ENST00000372998 MYO1CO00159 1063 aa12.05□□□□□ -0.48
LCN2-202ENST00000372998 CYTH3O43739 400 aa12.05□□□□□ -0.48
LCN2-202ENST00000372998 PRPF6O94906 941 aaKnown RBP12.05□□□□□ -0.48
LCN2-202ENST00000372998 GOLGA6DP0CG33 693 aa12.05□□□□□ -0.48
LCN2-202ENST00000372998 TECP42680 631 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms