RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 PCDHB4Q9Y5E5 795 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 PER1O15534 1290 aaPredicted RBP10.79□□□□□ -0.68
TRERF1-204ENST00000372922 OPHN1O60890 802 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 KRT10P13645 584 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 ARHGAP25P42331 645 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 IRX4P78413 519 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 FAM26FQ5R3K3 315 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 ELMSAN1Q6PJG2 1045 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 CDKL2Q92772 493 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 HVCN1Q96D96 273 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 EDC3Q96F86 508 aaKnown RBP10.79□□□□□ -0.68
TRERF1-204ENST00000372922 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.79□□□□□ -0.68
TRERF1-204ENST00000372922 INSRP06213 1382 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 ARHGAP4P98171 946 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 LRRC24Q50LG9 513 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 A0A0D9SFI3 127 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 POLR2FP61218 127 aaKnown RBP10.78□□□□□ -0.68
TRERF1-204ENST00000372922 CABS1Q96KC9 395 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 HAUS8Q9BT25 410 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 ADCY9O60503 1353 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 HNRNPDLO14979 420 aaKnown RBP10.78□□□□□ -0.68
TRERF1-204ENST00000372922 TRIM11Q96F44 468 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 BZW2Q9Y6E2 419 aaKnown RBP10.78□□□□□ -0.68
TRERF1-204ENST00000372922 UNC13AQ9UPW8 1703 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 CMA1P23946 247 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 IREB2P48200 963 aaKnown RBP10.78□□□□□ -0.68
TRERF1-204ENST00000372922 ADKP55263 362 aaKnown RBP10.78□□□□□ -0.68
TRERF1-204ENST00000372922 RSRC2Q7L4I2 434 aaKnown RBP10.78□□□□□ -0.68
TRERF1-204ENST00000372922 FLCNQ8NFG4 579 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 WDR11Q9BZH6 1224 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 USP44Q9H0E7 712 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 SLC39A2Q9NP94 309 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 ANLNQ9NQW6 1124 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 ZNF215Q9UL58 517 aaPredicted RBP10.78□□□□□ -0.68
TRERF1-204ENST00000372922 STK38LQ9Y2H1 464 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 MYOM2P54296 1465 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 SYNJ2BP-COX16A0A087WUM0 186 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 STK25O00506 426 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 ATF2P15336 505 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 KIAA1841Q6NSI8 718 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 PPP1R2P3Q6NXS1 205 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 IL17REQ8NFR9 667 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 MGARPQ8TDB4 240 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 NT5C1BQ96P26 610 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 COX16Q9P0S2 106 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 KIAA1024Q9UPX6 916 aa10.78□□□□□ -0.68
TRERF1-204ENST00000372922 H7C0C1 242 aa10.77□□□□□ -0.68
TRERF1-204ENST00000372922 THAP12O43422 761 aa10.77□□□□□ -0.68
TRERF1-204ENST00000372922 GADD45BO75293 160 aaPredicted RBP10.77□□□□□ -0.68
TRERF1-204ENST00000372922 PPFIA4O75335 1185 aa10.77□□□□□ -0.68
TRERF1-204ENST00000372922 ATP5OP48047 213 aa10.77□□□□□ -0.68
TRERF1-204ENST00000372922 LMNB2Q03252 620 aa10.77□□□□□ -0.68
TRERF1-204ENST00000372922 XPO4Q9C0E2 1151 aaKnown RBP10.77□□□□□ -0.68
TRERF1-204ENST00000372922 KANSL2Q9H9L4 492 aa10.77□□□□□ -0.68
TRERF1-204ENST00000372922 KCNQ3O43525 872 aa10.77□□□□□ -0.68
TRERF1-204ENST00000372922 CTNNA1P35221 906 aaKnown RBP10.77□□□□□ -0.68
TRERF1-204ENST00000372922 EXOC3L4Q17RC7 722 aa10.77□□□□□ -0.68
TRERF1-204ENST00000372922 ANKRD42Q8N9B4 389 aa10.77□□□□□ -0.68
TRERF1-204ENST00000372922 TSC1Q92574 1164 aa10.77□□□□□ -0.68
TRERF1-204ENST00000372922 ACCSQ96QU6 501 aa10.77□□□□□ -0.68
TRERF1-204ENST00000372922 hCG_1984214I3L0E3 225 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 PTGDRQ13258 359 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 CCDC93Q567U6 631 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 ZNF713Q8N859 430 aaPredicted RBP10.77□□□□□ -0.69
TRERF1-204ENST00000372922 DHX36Q9H2U1 1008 aaKnown RBP10.77□□□□□ -0.69
TRERF1-204ENST00000372922 KIF9Q9HAQ2 790 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 CPSF3Q9UKF6 684 aaKnown RBP10.77□□□□□ -0.69
TRERF1-204ENST00000372922 PCDHA4Q9UN74 947 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 ADD1P35611 737 aaKnown RBP10.77□□□□□ -0.69
TRERF1-204ENST00000372922 ZNF445P59923 1031 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 TTC1Q99614 292 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 ZSWIM6Q9HCJ5 1215 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 KMT5AQ9NQR1 393 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 HOMER3Q9NSC5 361 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 BAG5Q9UL15 447 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 HEXIM1O94992 359 aaKnown RBP10.77□□□□□ -0.69
TRERF1-204ENST00000372922 CYP4A11Q02928 519 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 ZBTB41Q5SVQ8 909 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 RYBPQ8N488 228 aaPredicted RBP10.77□□□□□ -0.69
TRERF1-204ENST00000372922 EAF2Q96CJ1 260 aaPredicted RBP10.77□□□□□ -0.69
TRERF1-204ENST00000372922 AK8Q96MA6 479 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 GPR108Q9NPR9 543 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 PBRM1Q86U86 1689 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 ECE1P42892 770 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 TRAPPC10P48553 1259 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 STAT2P52630 851 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 CCDC38Q502W7 563 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 KAZNQ674X7 775 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 KRT27Q7Z3Y8 459 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 SPICE1Q8N0Z3 855 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 FAM135BQ49AJ0 1406 aa10.77□□□□□ -0.69
TRERF1-204ENST00000372922 ABCC4O15439 1325 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 SPECC1L-ADORA2AF8WAN1 911 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 INO80B-WBP1J3KQ70 363 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 H2AFZP0C0S5 128 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 GCFC2P16383 781 aaKnown RBP10.76□□□□□ -0.69
TRERF1-204ENST00000372922 PSMC2P35998 433 aaKnown RBP10.76□□□□□ -0.69
TRERF1-204ENST00000372922 PHKA1P46020 1223 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 H2AFVQ71UI9 128 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 INO80BQ9C086 356 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms