RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 LY9Q9HBG7 655 aa7.96□□□□□ -1.14
USP1-202ENST00000371146 ZBTB5O15062 677 aa7.96□□□□□ -1.14
USP1-202ENST00000371146 PRR29P0C7W0 189 aa7.96□□□□□ -1.14
USP1-202ENST00000371146 GNA11P29992 359 aa7.96□□□□□ -1.14
USP1-202ENST00000371146 PSMC6P62333 389 aa7.96□□□□□ -1.14
USP1-202ENST00000371146 CCDC12Q8WUD4 166 aaPredicted RBP7.96□□□□□ -1.14
USP1-202ENST00000371146 MRIQ9BWK5 157 aa7.96□□□□□ -1.14
USP1-202ENST00000371146 WDR11Q9BZH6 1224 aa7.96□□□□□ -1.14
USP1-202ENST00000371146 CERS4Q9HA82 394 aa7.96□□□□□ -1.14
USP1-202ENST00000371146 LY75O60449 1722 aa7.96□□□□□ -1.14
USP1-202ENST00000371146 LAMA2P24043 3122 aaKnown RBP7.96□□□□□ -1.14
USP1-202ENST00000371146 ARFGEF2Q9Y6D5 1785 aa7.96□□□□□ -1.14
USP1-202ENST00000371146 FAM205CA6NFA0 338 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 DYNC1I1O14576 645 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 EVI5O60447 810 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 OFD1O75665 1012 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 NR3C2P08235 984 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 SCG2P13521 617 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 TNFAIP2Q03169 654 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 ZKSCAN8Q15776 578 aaPredicted RBP7.95□□□□□ -1.14
USP1-202ENST00000371146 ZBTB10Q96DT7 871 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 MS4A4AQ96JQ5 239 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 GLT1D1Q96MS3 346 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 SPATA33Q96N06 139 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 XPNPEP3Q9NQH7 507 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.95□□□□□ -1.145e-6■■■■■ 62.1
USP1-202ENST00000371146 CEP83Q9Y592 693 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 DNAH12Q6ZR08 3092 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 VWA3AA6NCI4 1184 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 GAS7O60861 476 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 ZNF286BP0CG31 522 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 CCND3P30281 292 aaPredicted RBP7.95□□□□□ -1.14
USP1-202ENST00000371146 SSR1P43307 286 aaKnown RBP7.95□□□□□ -1.14
USP1-202ENST00000371146 STXBP2Q15833 593 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 GNPTABQ3T906 1256 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 ABHD8Q96I13 439 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 ZBTB22O15209 634 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 MAPK4P31152 587 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 CACNB1Q02641 598 aaPredicted RBP7.95□□□□□ -1.14
USP1-202ENST00000371146 CCDC144BQ3MJ40 725 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 TMEM63BQ5T3F8 832 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 KRT40Q6A162 431 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.95□□□□□ -1.14
USP1-202ENST00000371146 OXER1Q8TDS5 423 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 TBCKQ8TEA7 893 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.95□□□□□ -1.14
USP1-202ENST00000371146 EHMT1Q9H9B1 1298 aa7.95□□□□□ -1.14
USP1-202ENST00000371146 NOL7Q9UMY1 257 aaKnown RBP7.95□□□□□ -1.14
USP1-202ENST00000371146 TULP2O00295 520 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 RAG1P15918 1043 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 TSHZ1Q6ZSZ6 1077 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 MCF2L2Q86YR7 1114 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 MB21D2Q8IYB1 491 aaPredicted RBP7.94□□□□□ -1.14
USP1-202ENST00000371146 NSUN6Q8TEA1 469 aaKnown RBP7.94□□□□□ -1.14
USP1-202ENST00000371146 AFG1LQ8WV93 481 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 EEF2KMTQ96G04 330 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 TTC14Q96N46 770 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 GBP3Q9H0R5 595 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 STARD7Q9NQZ5 370 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 RBM28Q9NW13 759 aaKnown RBP7.94□□□□□ -1.14
USP1-202ENST00000371146 SRRDQ9UH36 339 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 A0A0G2JLL6 359 aaPredicted RBP7.94□□□□□ -1.14
USP1-202ENST00000371146 FSD2A1L4K1 749 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 DDX11L8A8MPP1 907 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 ORC4O43929 436 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 HSPA8P11142 646 aaKnown RBP7.94□□□□□ -1.14
USP1-202ENST00000371146 TECP42680 631 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 MTERF2Q49AM1 385 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 NOM1Q5C9Z4 860 aaKnown RBP7.94□□□□□ -1.14
USP1-202ENST00000371146 TATDN1Q6P1N9 297 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 ARMCX2Q7L311 632 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 PRRT2Q7Z6L0 340 aaPredicted RBP7.94□□□□□ -1.14
USP1-202ENST00000371146 CCDC148Q8NFR7 591 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 IGDCC4Q8TDY8 1250 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 RNF19AQ9NV58 838 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 TBC1D7Q9P0N9 293 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 CGNQ9P2M7 1197 aaKnown RBP7.94□□□□□ -1.14
USP1-202ENST00000371146 LAMA3Q16787 3333 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 PNMA6FA0A0J9YX94 578 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 K7ELQ4 463 aaPredicted RBP7.94□□□□□ -1.14
USP1-202ENST00000371146 CYP2C9P11712 490 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 GABPAQ06546 454 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 WWC2Q6AWC2 1192 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 SIAH1Q8IUQ4 282 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 PROCA1Q8NCQ7 364 aaPredicted RBP7.94□□□□□ -1.14
USP1-202ENST00000371146 WASF1Q92558 559 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 EHD4Q9H223 541 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.94□□□□□ -1.14
USP1-202ENST00000371146 PCDHA6Q9UN73 950 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 PCDHA8Q9Y5H6 950 aa7.94□□□□□ -1.14
USP1-202ENST00000371146 SPEF2Q9C093 1822 aa7.93□□□□□ -1.14
USP1-202ENST00000371146 FOXP2O15409 715 aa7.93□□□□□ -1.14
USP1-202ENST00000371146 COBLO75128 1261 aa7.93□□□□□ -1.14
USP1-202ENST00000371146 BAG4O95429 457 aaKnown RBP7.93□□□□□ -1.14
USP1-202ENST00000371146 CCL5P13501 91 aa7.93□□□□□ -1.14
USP1-202ENST00000371146 UBA7P41226 1012 aa7.93□□□□□ -1.14
USP1-202ENST00000371146 FAM110CQ1W6H9 321 aa7.93□□□□□ -1.14
USP1-202ENST00000371146 PDXDC2PQ6P474 469 aa7.93□□□□□ -1.14
USP1-202ENST00000371146 CDR2LQ86X02 465 aaPredicted RBP7.93□□□□□ -1.14
USP1-202ENST00000371146 NPLOC4Q8TAT6 608 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms