RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 GOLGA6DP0CG33 693 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 MAGEA1P43355 309 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 CCT5P48643 541 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 GRM4Q14833 912 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 SF3B3Q15393 1217 aaKnown RBP12.1□□□□□ -0.47
LRIF1-201ENST00000369763 NDST4Q9H3R1 872 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 GOLGA6AQ9NYA3 693 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 DUOX1Q9NRD9 1551 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 A0A1W2PQC6 194 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 RASA1P20936 1047 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 SLC1A4P43007 532 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 TUBB2AQ13885 445 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 MAP9Q49MG5 647 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 SV2BQ7L1I2 683 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 DGKHQ86XP1 1220 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 SNX29Q8TEQ0 813 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 MMTAG2Q9BU76 263 aaKnown RBP12.1□□□□□ -0.47
LRIF1-201ENST00000369763 TUBB2BQ9BVA1 445 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 TTYH3Q9C0H2 523 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 FLT1P17948 1338 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 NPHP3-ACAD11A0A0J9YXS1 232 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 BICDL2A1A5D9 508 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 TRAF5O00463 557 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 USO1O60763 962 aaKnown RBP12.1□□□□□ -0.47
LRIF1-201ENST00000369763 TACC1O75410 805 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 VAV2P52735 878 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 CALCRLQ16602 461 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 PAPD7Q5XG87 772 aaKnown RBP12.1□□□□□ -0.47
LRIF1-201ENST00000369763 WDR93Q6P2C0 686 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 CCNI2Q6ZMN8 369 aaPredicted RBP12.1□□□□□ -0.47
LRIF1-201ENST00000369763 REXO1Q8N1G1 1221 aaKnown RBP12.1□□□□□ -0.47
LRIF1-201ENST00000369763 DHTKD1Q96HY7 919 aaPredicted RBP12.1□□□□□ -0.47
LRIF1-201ENST00000369763 FAM107BQ9H098 131 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 C6orf50Q9HD87 102 aa12.1□□□□□ -0.47
LRIF1-201ENST00000369763 EIF3CLB5ME19 914 aaKnown RBP12.09□□□□□ -0.47
LRIF1-201ENST00000369763 ZEB2O60315 1214 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 BTDP43251 543 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 CKAP4Q07065 602 aaKnown RBP12.09□□□□□ -0.47
LRIF1-201ENST00000369763 KCNB1Q14721 858 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 TRADDQ15628 312 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 CREG2Q8IUH2 290 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 TEX11Q8IYF3 940 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 EIF3CQ99613 913 aaKnown RBP12.09□□□□□ -0.47
LRIF1-201ENST00000369763 FGFBP2Q9BYJ0 223 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 SHANK3Q9BYB0 1731 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 AGPSO00116 658 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 KRT14P02533 472 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 CDK8P49336 464 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 CCDC40Q4G0X9 1142 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 CCDC70Q6NSX1 233 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 TMED8Q6PL24 325 aaPredicted RBP12.09□□□□□ -0.47
LRIF1-201ENST00000369763 SPATA4Q8NEY3 305 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 MTMR8Q96EF0 704 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 CCSER1Q9C0I3 900 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 PAPPAQ13219 1627 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 M0R2N6 131 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 PCP11498 1178 aaKnown RBP12.09□□□□□ -0.47
LRIF1-201ENST00000369763 VWA3BQ502W6 1294 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 EHBP1Q8NDI1 1231 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 FAM76AQ8TAV0 307 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 MED4Q9NPJ6 270 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 RBM12Q9NTZ6 932 aaKnown RBP12.09□□□□□ -0.47
LRIF1-201ENST00000369763 SNX12Q9UMY4 172 aa12.09□□□□□ -0.47
LRIF1-201ENST00000369763 BAG3O95817 575 aa12.08□□□□□ -0.48
LRIF1-201ENST00000369763 POLR2FP61218 127 aaKnown RBP12.08□□□□□ -0.48
LRIF1-201ENST00000369763 SF3A3Q12874 501 aaKnown RBP eCLIP12.08□□□□□ -0.48
LRIF1-201ENST00000369763 MEA1Q16626 185 aa12.08□□□□□ -0.48
LRIF1-201ENST00000369763 CNNM4Q6P4Q7 775 aa12.08□□□□□ -0.48
LRIF1-201ENST00000369763 DDX12PQ92771 950 aa12.08□□□□□ -0.48
LRIF1-201ENST00000369763 OSBPL9Q96SU4 736 aa12.08□□□□□ -0.48
LRIF1-201ENST00000369763 RUFY1Q96T51 708 aa12.08□□□□□ -0.48
LRIF1-201ENST00000369763 IVLP07476 585 aa12.08□□□□□ -0.48
LRIF1-201ENST00000369763 GNAQP50148 359 aa12.08□□□□□ -0.48
LRIF1-201ENST00000369763 GRB10Q13322 594 aa12.08□□□□□ -0.48
LRIF1-201ENST00000369763 TSEN2Q8NCE0 465 aaKnown RBP12.08□□□□□ -0.48
LRIF1-201ENST00000369763 LARP4BQ92615 738 aaKnown RBP12.08□□□□□ -0.48
LRIF1-201ENST00000369763 ARL8AQ96BM9 186 aa12.08□□□□□ -0.48
LRIF1-201ENST00000369763 PSD3Q9NYI0 1048 aa12.08□□□□□ -0.48
LRIF1-201ENST00000369763 BCL9LQ86UU0 1499 aa12.08□□□□□ -0.48
LRIF1-201ENST00000369763 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.08□□□□□ -0.48
LRIF1-201ENST00000369763 ITGB4P16144 1822 aa12.08□□□□□ -0.48
LRIF1-201ENST00000369763 MYH10P35580 1976 aa12.08□□□□□ -0.48
LRIF1-201ENST00000369763 MPHOSPH10O00566 681 aaKnown RBP12.07□□□□□ -0.48
LRIF1-201ENST00000369763 LIG3P49916 1009 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 RAPGEF1Q13905 1077 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 ECM1Q16610 540 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 TPTE2Q6XPS3 522 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 FAM114A1Q8IWE2 563 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 KLHL7Q8IXQ5 586 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 BLOC1S4Q9NUP1 217 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 PALM3A6NDB9 673 aaPredicted RBP12.07□□□□□ -0.48
LRIF1-201ENST00000369763 RIMBP2O15034 1052 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 AMPD3Q01432 767 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 EHHADHQ08426 723 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 TTBK2Q6IQ55 1244 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 NUP58Q9BVL2 599 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 SH2D4AQ9H788 454 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 ADAMTS1Q9UHI8 967 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 NFU1Q9UMS0 254 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 TIAM2Q8IVF5 1701 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms