RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 SOX10P56693 466 aa21.49■■□□□ 1.03
LMNA-204ENST00000368298 BECN1Q14457 450 aa21.49■■□□□ 1.03
LMNA-204ENST00000368298 FAM177A1Q8N128 213 aaPredicted RBP21.49■■□□□ 1.03
LMNA-204ENST00000368298 NECAB1Q8N987 351 aa21.49■■□□□ 1.03
LMNA-204ENST00000368298 RMDN3Q96TC7 470 aa21.49■■□□□ 1.03
LMNA-204ENST00000368298 MPHOSPH6Q99547 160 aaKnown RBP21.49■■□□□ 1.03
LMNA-204ENST00000368298 SH3GLB2Q9NR46 395 aa21.49■■□□□ 1.03
LMNA-204ENST00000368298 ST3GAL1Q11201 340 aa21.48■■□□□ 1.03
LMNA-204ENST00000368298 PRAMEF19Q5SWL8 479 aa21.48■■□□□ 1.03
LMNA-204ENST00000368298 CUL5Q93034 780 aa21.48■■□□□ 1.03
LMNA-204ENST00000368298 GLT8D2Q9H1C3 349 aa21.48■■□□□ 1.03
LMNA-204ENST00000368298 RIC8AQ9NPQ8 531 aa21.48■■□□□ 1.03
LMNA-204ENST00000368298 SEPT4O43236 478 aa21.47■■□□□ 1.03
LMNA-204ENST00000368298 MSCO60682 206 aa21.47■■□□□ 1.03
LMNA-204ENST00000368298 MYCP01106 439 aaPredicted RBP21.47■■□□□ 1.03
LMNA-204ENST00000368298 GJA8P48165 433 aa21.47■■□□□ 1.03
LMNA-204ENST00000368298 MCM2P49736 904 aa21.47■■□□□ 1.03
LMNA-204ENST00000368298 ACVR2BQ13705 512 aa21.47■■□□□ 1.03
LMNA-204ENST00000368298 USP17L6PQ6QN14 398 aa21.47■■□□□ 1.03
LMNA-204ENST00000368298 CCDC12Q8WUD4 166 aaPredicted RBP21.47■■□□□ 1.03
LMNA-204ENST00000368298 CRISPLD2Q9H0B8 497 aa21.47■■□□□ 1.03
LMNA-204ENST00000368298 ZMYND12Q9H0C1 365 aa21.47■■□□□ 1.03
LMNA-204ENST00000368298 PXMP2Q9NR77 195 aa21.47■■□□□ 1.03
LMNA-204ENST00000368298 FRMPD4Q14CM0 1322 aa21.47■■□□□ 1.03
LMNA-204ENST00000368298 PPFIA3O75145 1194 aa21.46■■□□□ 1.03
LMNA-204ENST00000368298 SGPL1O95470 568 aa21.46■■□□□ 1.03
LMNA-204ENST00000368298 LHX8Q68G74 356 aa21.46■■□□□ 1.03
LMNA-204ENST00000368298 NSUN7Q8NE18 718 aaKnown RBP21.46■■□□□ 1.03
LMNA-204ENST00000368298 SMARCC2Q8TAQ2 1214 aa21.46■■□□□ 1.03
LMNA-204ENST00000368298 LRRC37A2A6NM11 1700 aa21.46■■□□□ 1.03
LMNA-204ENST00000368298 KIAA0100Q14667 2235 aaKnown RBP21.46■■□□□ 1.03
LMNA-204ENST00000368298 SMCO2A6NFE2 343 aa21.45■■□□□ 1.03
LMNA-204ENST00000368298 CD2BP2O95400 341 aaKnown RBP21.45■■□□□ 1.03
LMNA-204ENST00000368298 ARHGEF16Q5VV41 709 aa21.45■■□□□ 1.03
LMNA-204ENST00000368298 U2AF1L4Q8WU68 220 aaKnown RBP21.45■■□□□ 1.03
LMNA-204ENST00000368298 DEFB118Q96PH6 123 aa21.45■■□□□ 1.03
LMNA-204ENST00000368298 PDCD2LQ9BRP1 358 aa21.45■■□□□ 1.03
LMNA-204ENST00000368298 LLPHQ9BRT6 129 aaKnown RBP21.45■■□□□ 1.03
LMNA-204ENST00000368298 VTA1Q9NP79 307 aa21.45■■□□□ 1.03
LMNA-204ENST00000368298 DDX20Q9UHI6 824 aaKnown RBP21.45■■□□□ 1.03
LMNA-204ENST00000368298 POTEFA5A3E0 1075 aa21.45■■□□□ 1.02
LMNA-204ENST00000368298 NR3C2P08235 984 aa21.45■■□□□ 1.02
LMNA-204ENST00000368298 FDPSP14324 419 aaKnown RBP21.45■■□□□ 1.02
LMNA-204ENST00000368298 ADCY7P51828 1080 aa21.45■■□□□ 1.02
LMNA-204ENST00000368298 SHISA4Q96DD7 197 aa21.45■■□□□ 1.02
LMNA-204ENST00000368298 ANP32EQ9BTT0 268 aa21.45■■□□□ 1.02
LMNA-204ENST00000368298 DDX49Q9Y6V7 483 aaKnown RBP21.45■■□□□ 1.02
LMNA-204ENST00000368298 RBM47A0AV96 593 aaKnown RBP21.44■■□□□ 1.02
LMNA-204ENST00000368298 AKR1A1P14550 325 aa21.44■■□□□ 1.02
LMNA-204ENST00000368298 CNGA1P29973 690 aa21.44■■□□□ 1.02
LMNA-204ENST00000368298 CLK2P49760 499 aaKnown RBP21.44■■□□□ 1.02
LMNA-204ENST00000368298 PDE4DQ08499 809 aa21.44■■□□□ 1.02
LMNA-204ENST00000368298 TAPT1Q6NXT6 567 aa21.44■■□□□ 1.02
LMNA-204ENST00000368298 VSIG10LQ86VR7 867 aa21.44■■□□□ 1.02
LMNA-204ENST00000368298 FCHSD1Q86WN1 690 aa21.44■■□□□ 1.02
LMNA-204ENST00000368298 CCDC148Q8NFR7 591 aa21.44■■□□□ 1.02
LMNA-204ENST00000368298 ORC3Q9UBD5 711 aaPredicted RBP21.44■■□□□ 1.02
LMNA-204ENST00000368298 OGDHLQ9ULD0 1010 aa21.44■■□□□ 1.02
LMNA-204ENST00000368298 FAM184BQ9ULE4 1060 aa21.44■■□□□ 1.02
LMNA-204ENST00000368298 FOSP01100 380 aaPredicted RBP21.43■■□□□ 1.02
LMNA-204ENST00000368298 EIF2AK2P19525 551 aaKnown RBP21.43■■□□□ 1.02
LMNA-204ENST00000368298 GNA11P29992 359 aa21.43■■□□□ 1.02
LMNA-204ENST00000368298 PGM5Q15124 567 aa21.43■■□□□ 1.02
LMNA-204ENST00000368298 STXBP2Q15833 593 aa21.43■■□□□ 1.02
LMNA-204ENST00000368298 CCDC144BQ3MJ40 725 aa21.43■■□□□ 1.02
LMNA-204ENST00000368298 WASF1Q92558 559 aa21.43■■□□□ 1.02
LMNA-204ENST00000368298 C6orf50Q9HD87 102 aa21.43■■□□□ 1.02
LMNA-204ENST00000368298 ZHX1Q9UKY1 873 aaPredicted RBP21.43■■□□□ 1.02
LMNA-204ENST00000368298 FRMPD3Q5JV73 1810 aa21.42■■□□□ 1.02
LMNA-204ENST00000368298 EIF3JO75822 258 aaKnown RBP21.42■■□□□ 1.02
LMNA-204ENST00000368298 UBE2SQ16763 222 aa21.42■■□□□ 1.02
LMNA-204ENST00000368298 MCTP2Q6DN12 878 aa21.42■■□□□ 1.02
LMNA-204ENST00000368298 IQSEC1Q6DN90 963 aa21.42■■□□□ 1.02
LMNA-204ENST00000368298 CCDC83Q8IWF9 413 aa21.42■■□□□ 1.02
LMNA-204ENST00000368298 TMX3Q96JJ7 454 aa21.42■■□□□ 1.02
LMNA-204ENST00000368298 VPS54Q9P1Q0 977 aa21.42■■□□□ 1.02
LMNA-204ENST00000368298 MLLT1Q03111 559 aaPredicted RBP21.41■■□□□ 1.02
LMNA-204ENST00000368298 AP3B2Q13367 1082 aa21.41■■□□□ 1.02
LMNA-204ENST00000368298 GALNT17Q6IS24 598 aa21.41■■□□□ 1.02
LMNA-204ENST00000368298 XRRA1Q6P2D8 792 aa21.41■■□□□ 1.02
LMNA-204ENST00000368298 AIFM3Q96NN9 605 aa21.41■■□□□ 1.02
LMNA-204ENST00000368298 PCDHA6Q9UN73 950 aa21.41■■□□□ 1.02
LMNA-204ENST00000368298 PCDHA8Q9Y5H6 950 aa21.41■■□□□ 1.02
LMNA-204ENST00000368298 KIAA1217Q5T5P2 1943 aa21.41■■□□□ 1.02
LMNA-204ENST00000368298 STAM2O75886 525 aa21.4■■□□□ 1.02
LMNA-204ENST00000368298 EN2P19622 333 aaPredicted RBP21.4■■□□□ 1.02
LMNA-204ENST00000368298 PCNX4Q63HM2 1172 aa21.4■■□□□ 1.02
LMNA-204ENST00000368298 EEPD1Q7L9B9 569 aa21.4■■□□□ 1.02
LMNA-204ENST00000368298 FBXO16Q8IX29 292 aaPredicted RBP21.4■■□□□ 1.02
LMNA-204ENST00000368298 BICD2Q8TD16 824 aa21.4■■□□□ 1.02
LMNA-204ENST00000368298 PDGFCQ9NRA1 345 aa21.4■■□□□ 1.02
LMNA-204ENST00000368298 BRCA2P51587 3418 aa21.4■■□□□ 1.02
LMNA-204ENST00000368298 SPDYE3A6NKU9 549 aa21.39■■□□□ 1.02
LMNA-204ENST00000368298 JAK2O60674 1132 aa21.39■■□□□ 1.02
LMNA-204ENST00000368298 DUSP11O75319 330 aaKnown RBP21.39■■□□□ 1.02
LMNA-204ENST00000368298 CCND2P30279 289 aa21.39■■□□□ 1.02
LMNA-204ENST00000368298 ANKLE1Q8NAG6 615 aa21.39■■□□□ 1.02
LMNA-204ENST00000368298 DAGLBQ8NCG7 672 aa21.39■■□□□ 1.02
LMNA-204ENST00000368298 IL31RAQ8NI17 732 aa21.39■■□□□ 1.02
LMNA-204ENST00000368298 PHF20Q9BVI0 1012 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms