RNA–Protein interactions for RNA: ENST00000368202.4

PTPRK-201, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 526 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-201ENST00000368202 CAPNS2Q96L46 248 aa13.84□□□□□ -0.19
PTPRK-201ENST00000368202 MPHOSPH6Q99547 160 aaKnown RBP13.84□□□□□ -0.19
PTPRK-201ENST00000368202 PTPN18Q99952 460 aa13.84□□□□□ -0.19
PTPRK-201ENST00000368202 LMBRD1Q9NUN5 540 aa13.84□□□□□ -0.19
PTPRK-201ENST00000368202 DDX49Q9Y6V7 483 aaKnown RBP13.84□□□□□ -0.19
PTPRK-201ENST00000368202 IVNS1ABPQ9Y6Y0 642 aa13.84□□□□□ -0.19
PTPRK-201ENST00000368202 PLXNB2O15031 1838 aa13.83□□□□□ -0.2
PTPRK-201ENST00000368202 RASSF10A6NK89 507 aa13.83□□□□□ -0.2
PTPRK-201ENST00000368202 B4DLN1 442 aa13.83□□□□□ -0.2
PTPRK-201ENST00000368202 CNMDO75829 334 aa13.83□□□□□ -0.2
PTPRK-201ENST00000368202 ALDH1A1P00352 501 aa13.83□□□□□ -0.2
PTPRK-201ENST00000368202 ERCC3P19447 782 aa13.83□□□□□ -0.2
PTPRK-201ENST00000368202 MARCKSP29966 332 aaPredicted RBP13.83□□□□□ -0.2
PTPRK-201ENST00000368202 GHRHRQ02643 423 aa13.83□□□□□ -0.2
PTPRK-201ENST00000368202 PTGDRQ13258 359 aa13.83□□□□□ -0.2
PTPRK-201ENST00000368202 KCTD2Q14681 263 aa13.83□□□□□ -0.2
PTPRK-201ENST00000368202 SLC30A10Q6XR72 485 aa13.83□□□□□ -0.2
PTPRK-201ENST00000368202 KRI1Q8N9T8 703 aaKnown RBP13.83□□□□□ -0.2
PTPRK-201ENST00000368202 SYTL5Q8TDW5 730 aaPredicted RBP13.83□□□□□ -0.2
PTPRK-201ENST00000368202 MMP19Q99542 508 aa13.83□□□□□ -0.2
PTPRK-201ENST00000368202 TXNRD2Q9NNW7 524 aa13.83□□□□□ -0.2
PTPRK-201ENST00000368202 A1CFQ9NQ94 594 aaKnown RBP13.83□□□□□ -0.2
PTPRK-201ENST00000368202 DDX25Q9UHL0 483 aaKnown RBP13.83□□□□□ -0.2
PTPRK-201ENST00000368202 IGF2BP3O00425 579 aaKnown RBP eCLIP13.82□□□□□ -0.2
PTPRK-201ENST00000368202 CUTAO60888 179 aa13.82□□□□□ -0.2
PTPRK-201ENST00000368202 OR52Z1P0C646 297 aa13.82□□□□□ -0.2
PTPRK-201ENST00000368202 FCER1AP12319 257 aa13.82□□□□□ -0.2
PTPRK-201ENST00000368202 TM4SF4P48230 202 aa13.82□□□□□ -0.2
PTPRK-201ENST00000368202 ATP2C1P98194 919 aaPredicted RBP13.82□□□□□ -0.2
PTPRK-201ENST00000368202 PTPAQ15257 358 aa13.82□□□□□ -0.2
PTPRK-201ENST00000368202 CALCRLQ16602 461 aa13.82□□□□□ -0.2
PTPRK-201ENST00000368202 FAM110CQ1W6H9 321 aa13.82□□□□□ -0.2
PTPRK-201ENST00000368202 TMEM266Q2M3C6 531 aa13.82□□□□□ -0.2
PTPRK-201ENST00000368202 Q3C1V9 767 aa13.82□□□□□ -0.2
PTPRK-201ENST00000368202 PPP4R3AQ6IN85 833 aa13.82□□□□□ -0.2
PTPRK-201ENST00000368202 MOXD1Q6UVY6 613 aa13.82□□□□□ -0.2
PTPRK-201ENST00000368202 FERMT2Q96AC1 680 aa13.82□□□□□ -0.2
PTPRK-201ENST00000368202 RMDN3Q96TC7 470 aa13.82□□□□□ -0.2
PTPRK-201ENST00000368202 CYP39A1Q9NYL5 469 aa13.82□□□□□ -0.2
PTPRK-201ENST00000368202 MORF4L1Q9UBU8 362 aa13.82□□□□□ -0.2
PTPRK-201ENST00000368202 ADD3Q9UEY8 706 aaKnown RBP13.82□□□□□ -0.2
PTPRK-201ENST00000368202 PCDHA7Q9UN72 937 aa13.82□□□□□ -0.2
PTPRK-201ENST00000368202 POTEB2H3BUK9 544 aa13.81□□□□□ -0.2
PTPRK-201ENST00000368202 PEX10O60683 326 aa13.81□□□□□ -0.2
PTPRK-201ENST00000368202 TDP2O95551 362 aa13.81□□□□□ -0.2
PTPRK-201ENST00000368202 CYP3A4P08684 503 aa13.81□□□□□ -0.2
PTPRK-201ENST00000368202 EIF2AK2P19525 551 aaKnown RBP13.81□□□□□ -0.2
PTPRK-201ENST00000368202 UBXN2AP68543 259 aa13.81□□□□□ -0.2
PTPRK-201ENST00000368202 ARL6IP4Q66PJ3 421 aaKnown RBP13.81□□□□□ -0.2
PTPRK-201ENST00000368202 ADALQ6DHV7 355 aa13.81□□□□□ -0.2
PTPRK-201ENST00000368202 DTHD1Q6ZMT9 781 aa13.81□□□□□ -0.2
PTPRK-201ENST00000368202 CCDC73Q6ZRK6 1079 aa13.81□□□□□ -0.2
PTPRK-201ENST00000368202 NSUN6Q8TEA1 469 aaKnown RBP13.81□□□□□ -0.2
PTPRK-201ENST00000368202 TAAR1Q96RJ0 339 aa13.81□□□□□ -0.2
PTPRK-201ENST00000368202 RAB34Q9BZG1 259 aa13.81□□□□□ -0.2
PTPRK-201ENST00000368202 FAM13BQ9NYF5 915 aa13.81□□□□□ -0.2
PTPRK-201ENST00000368202 MORC2Q9Y6X9 1032 aaPredicted RBP13.81□□□□□ -0.2
PTPRK-201ENST00000368202 WNT7AO00755 349 aa13.8□□□□□ -0.2
PTPRK-201ENST00000368202 GADD45BO75293 160 aaPredicted RBP13.8□□□□□ -0.2
PTPRK-201ENST00000368202 MYCLP12524 364 aaPredicted RBP13.8□□□□□ -0.2
PTPRK-201ENST00000368202 CCND2P30279 289 aa13.8□□□□□ -0.2
PTPRK-201ENST00000368202 MAPK4P31152 587 aa13.8□□□□□ -0.2
PTPRK-201ENST00000368202 PRPHP41219 470 aa13.8□□□□□ -0.2
PTPRK-201ENST00000368202 SETQ01105 290 aaPredicted RBP13.8□□□□□ -0.2
PTPRK-201ENST00000368202 PGM5Q15124 567 aa13.8□□□□□ -0.2
PTPRK-201ENST00000368202 POTEEQ6S8J3 1075 aa13.8□□□□□ -0.2
PTPRK-201ENST00000368202 DNERQ8NFT8 737 aa13.8□□□□□ -0.2
PTPRK-201ENST00000368202 SYAP1Q96A49 352 aaPredicted RBP13.8□□□□□ -0.2
PTPRK-201ENST00000368202 PXMP2Q9NR77 195 aa13.8□□□□□ -0.2
PTPRK-201ENST00000368202 COL20A1Q9P218 1284 aa13.8□□□□□ -0.2
PTPRK-201ENST00000368202 CPA4Q9UI42 421 aa13.8□□□□□ -0.2
PTPRK-201ENST00000368202 SRPRBQ9Y5M8 271 aaKnown RBP13.8□□□□□ -0.2
PTPRK-201ENST00000368202 ZNFX1Q9P2E3 1918 aaKnown RBP13.8□□□□□ -0.2
PTPRK-201ENST00000368202 VWA3AA6NCI4 1184 aa13.79□□□□□ -0.2
PTPRK-201ENST00000368202 STRNO43815 780 aa13.79□□□□□ -0.2
PTPRK-201ENST00000368202 TRAK2O60296 914 aa13.79□□□□□ -0.2
PTPRK-201ENST00000368202 TLR2O60603 784 aa13.79□□□□□ -0.2
PTPRK-201ENST00000368202 AOC2O75106 756 aa13.79□□□□□ -0.2
PTPRK-201ENST00000368202 PTPREP23469 700 aa13.79□□□□□ -0.2
PTPRK-201ENST00000368202 CIITAP33076 1130 aa13.79□□□□□ -0.2
PTPRK-201ENST00000368202 TXLNAP40222 546 aa13.79□□□□□ -0.2
PTPRK-201ENST00000368202 PRR16Q569H4 304 aa13.79□□□□□ -0.2
PTPRK-201ENST00000368202 PCNX4Q63HM2 1172 aa13.79□□□□□ -0.2
PTPRK-201ENST00000368202 XRRA1Q6P2D8 792 aa13.79□□□□□ -0.2
PTPRK-201ENST00000368202 PLA2G4DQ86XP0 818 aa13.79□□□□□ -0.2
PTPRK-201ENST00000368202 POTEDQ86YR6 584 aa13.79□□□□□ -0.2
PTPRK-201ENST00000368202 SLFN12Q8IYM2 578 aa13.79□□□□□ -0.2
PTPRK-201ENST00000368202 MRPS27Q92552 414 aaKnown RBP13.79□□□□□ -0.2
PTPRK-201ENST00000368202 EFCC1Q9HA90 598 aa13.79□□□□□ -0.2
PTPRK-201ENST00000368202 FBXO2Q9UK22 296 aaPredicted RBP13.79□□□□□ -0.2
PTPRK-201ENST00000368202 RPTORQ8N122 1335 aa13.79□□□□□ -0.2
PTPRK-201ENST00000368202 PLXNA1Q9UIW2 1896 aa13.78□□□□□ -0.2
PTPRK-201ENST00000368202 CYP3A7-CYP3A51PA0A087WV96 503 aa13.78□□□□□ -0.2
PTPRK-201ENST00000368202 A0A1W2PQ27 194 aa13.78□□□□□ -0.2
PTPRK-201ENST00000368202 A0A1W2PQ64 194 aa13.78□□□□□ -0.2
PTPRK-201ENST00000368202 A0A1W2PQD8 194 aa13.78□□□□□ -0.2
PTPRK-201ENST00000368202 TBX3O15119 743 aa13.78□□□□□ -0.2
PTPRK-201ENST00000368202 CA12O43570 354 aa13.78□□□□□ -0.2
PTPRK-201ENST00000368202 SLC37A4O43826 429 aa13.78□□□□□ -0.2
PTPRK-201ENST00000368202 STAM2O75886 525 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms