RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 NFE2L3Q9Y4A8 694 aa12.98□□□□□ -0.33
USF1-201ENST00000368019 SRPRBQ9Y5M8 271 aaKnown RBP12.98□□□□□ -0.33
USF1-201ENST00000368019 MAST2Q6P0Q8 1798 aa12.97□□□□□ -0.33
USF1-201ENST00000368019 TMEM232C9JQI7 657 aa12.97□□□□□ -0.33
USF1-201ENST00000368019 RPS6KA5O75582 802 aa12.97□□□□□ -0.33
USF1-201ENST00000368019 DEXIO95424 95 aa12.97□□□□□ -0.33
USF1-201ENST00000368019 ELNP15502 786 aa12.97□□□□□ -0.33
USF1-201ENST00000368019 CDC27P30260 824 aa12.97□□□□□ -0.33
USF1-201ENST00000368019 CAP2P40123 477 aa12.97□□□□□ -0.33
USF1-201ENST00000368019 PBX1P40424 430 aa12.97□□□□□ -0.33
USF1-201ENST00000368019 SPP2Q13103 211 aa12.97□□□□□ -0.33
USF1-201ENST00000368019 SEMA3FQ13275 785 aa12.97□□□□□ -0.33
USF1-201ENST00000368019 TRIM14Q14142 442 aa12.97□□□□□ -0.33
USF1-201ENST00000368019 SMC1AQ14683 1233 aaKnown RBP12.97□□□□□ -0.33
USF1-201ENST00000368019 FAM110CQ1W6H9 321 aa12.97□□□□□ -0.33
USF1-201ENST00000368019 CYB5R4Q7L1T6 521 aa12.97□□□□□ -0.33
USF1-201ENST00000368019 TBC1D10CQ8IV04 446 aa12.97□□□□□ -0.33
USF1-201ENST00000368019 TRIM22Q8IYM9 498 aa12.97□□□□□ -0.33
USF1-201ENST00000368019 SMCR8Q8TEV9 937 aaPredicted RBP12.97□□□□□ -0.33
USF1-201ENST00000368019 DPF3Q92784 378 aa12.97□□□□□ -0.33
USF1-201ENST00000368019 ST7Q9NRC1 585 aa12.97□□□□□ -0.33
USF1-201ENST00000368019 FAM217BQ9NTX9 383 aaPredicted RBP12.97□□□□□ -0.33
USF1-201ENST00000368019 AATFQ9NY61 560 aaKnown RBP eCLIP12.97□□□□□ -0.33
USF1-201ENST00000368019 CDC23Q9UJX2 597 aa12.97□□□□□ -0.33
USF1-201ENST00000368019 TNPO2O14787 897 aaKnown RBP12.96□□□□□ -0.33
USF1-201ENST00000368019 ACTN4O43707 911 aaKnown RBP12.96□□□□□ -0.33
USF1-201ENST00000368019 EIF3JO75822 258 aaKnown RBP12.96□□□□□ -0.33
USF1-201ENST00000368019 INHAP05111 366 aa12.96□□□□□ -0.33
USF1-201ENST00000368019 CAPN2P17655 700 aa12.96□□□□□ -0.33
USF1-201ENST00000368019 GNAT2P19087 354 aa12.96□□□□□ -0.33
USF1-201ENST00000368019 CDK11BP21127 795 aaKnown RBP12.96□□□□□ -0.33
USF1-201ENST00000368019 BMP6P22004 513 aa12.96□□□□□ -0.33
USF1-201ENST00000368019 PDE4BQ07343 736 aa12.96□□□□□ -0.33
USF1-201ENST00000368019 SPAG1Q07617 926 aa12.96□□□□□ -0.33
USF1-201ENST00000368019 WHAMMP3Q1A5X7 153 aa12.96□□□□□ -0.33
USF1-201ENST00000368019 SH3D19Q5HYK7 790 aa12.96□□□□□ -0.33
USF1-201ENST00000368019 SPATA1Q5VX52 437 aa12.96□□□□□ -0.33
USF1-201ENST00000368019 RASGRP2Q7LDG7 609 aa12.96□□□□□ -0.33
USF1-201ENST00000368019 CNGA4Q8IV77 575 aa12.96□□□□□ -0.33
USF1-201ENST00000368019 STK11IPQ8N1F8 1099 aa12.96□□□□□ -0.33
USF1-201ENST00000368019 ANKRD13CQ8N6S4 541 aa12.96□□□□□ -0.33
USF1-201ENST00000368019 ZNF280CQ8ND82 737 aa12.96□□□□□ -0.33
USF1-201ENST00000368019 GOLGA5Q8TBA6 731 aa12.96□□□□□ -0.33
USF1-201ENST00000368019 WDR24Q96S15 920 aa12.96□□□□□ -0.33
USF1-201ENST00000368019 HTATIP2Q9BUP3 242 aa12.96□□□□□ -0.33
USF1-201ENST00000368019 PARD6BQ9BYG5 372 aa12.96□□□□□ -0.33
USF1-201ENST00000368019 CRISPLD2Q9H0B8 497 aa12.96□□□□□ -0.33
USF1-201ENST00000368019 PAK6Q9NQU5 681 aaPredicted RBP12.96□□□□□ -0.33
USF1-201ENST00000368019 HERC5Q9UII4 1024 aaKnown RBP12.96□□□□□ -0.33
USF1-201ENST00000368019 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.95□□□□□ -0.34
USF1-201ENST00000368019 PATL2C9JE40 543 aaKnown RBP12.95□□□□□ -0.34
USF1-201ENST00000368019 KIF5CO60282 957 aa12.95□□□□□ -0.34
USF1-201ENST00000368019 RANBP6O60518 1105 aaKnown RBP12.95□□□□□ -0.34
USF1-201ENST00000368019 SASH3O75995 380 aa12.95□□□□□ -0.34
USF1-201ENST00000368019 FARP2O94887 1054 aaPredicted RBP12.95□□□□□ -0.34
USF1-201ENST00000368019 GCLCP48506 637 aaPredicted RBP12.95□□□□□ -0.34
USF1-201ENST00000368019 HNRNPH2P55795 449 aaKnown RBP12.95□□□□□ -0.34
USF1-201ENST00000368019 PPP4CP60510 307 aa12.95□□□□□ -0.34
USF1-201ENST00000368019 IRX5P78411 483 aaPredicted RBP12.95□□□□□ -0.34
USF1-201ENST00000368019 LONRF2Q1L5Z9 754 aa12.95□□□□□ -0.34
USF1-201ENST00000368019 FILIP1LQ4L180 1135 aa12.95□□□□□ -0.34
USF1-201ENST00000368019 TMEM67Q5HYA8 995 aa12.95□□□□□ -0.34
USF1-201ENST00000368019 CDKAL1Q5VV42 579 aa12.95□□□□□ -0.34
USF1-201ENST00000368019 CHRDL2Q6WN34 429 aa12.95□□□□□ -0.34
USF1-201ENST00000368019 HDXQ7Z353 690 aa12.95□□□□□ -0.34
USF1-201ENST00000368019 SH3RF1Q7Z6J0 888 aa12.95□□□□□ -0.34
USF1-201ENST00000368019 TEX11Q8IYF3 940 aa12.95□□□□□ -0.34
USF1-201ENST00000368019 SH3RF3Q8TEJ3 882 aaPredicted RBP12.95□□□□□ -0.34
USF1-201ENST00000368019 GSDMAQ96QA5 445 aa12.95□□□□□ -0.34
USF1-201ENST00000368019 WDR18Q9BV38 432 aa12.95□□□□□ -0.34
USF1-201ENST00000368019 ACBD3Q9H3P7 528 aa12.95□□□□□ -0.34
USF1-201ENST00000368019 GJB4Q9NTQ9 266 aa12.95□□□□□ -0.34
USF1-201ENST00000368019 TMEM51Q9NW97 253 aa12.95□□□□□ -0.34
USF1-201ENST00000368019 PNMA3Q9UL41 463 aa12.95□□□□□ -0.34
USF1-201ENST00000368019 ADGRG1Q9Y653 693 aa12.95□□□□□ -0.34
USF1-201ENST00000368019 SLC12A7Q9Y666 1083 aa12.95□□□□□ -0.34
USF1-201ENST00000368019 MYH1P12882 1939 aa12.94□□□□□ -0.34
USF1-201ENST00000368019 TCRBV5S4A2TA0A5A2 114 aa12.94□□□□□ -0.34
USF1-201ENST00000368019 USP17L5A8MUK1 530 aa12.94□□□□□ -0.34
USF1-201ENST00000368019 IVLP07476 585 aa12.94□□□□□ -0.34
USF1-201ENST00000368019 MCM3P25205 808 aa12.94□□□□□ -0.34
USF1-201ENST00000368019 TOB1P50616 345 aaPredicted RBP12.94□□□□□ -0.34
USF1-201ENST00000368019 HMGCS2P54868 508 aa12.94□□□□□ -0.34
USF1-201ENST00000368019 CHMP4BP1P59074 171 aa12.94□□□□□ -0.34
USF1-201ENST00000368019 JAG1P78504 1218 aa12.94□□□□□ -0.34
USF1-201ENST00000368019 SART3Q15020 963 aaKnown RBP12.94□□□□□ -0.34
USF1-201ENST00000368019 APTXQ7Z2E3 356 aaKnown RBP12.94□□□□□ -0.34
USF1-201ENST00000368019 PPFIBP1Q86W92 1011 aa12.94□□□□□ -0.34
USF1-201ENST00000368019 TMTC1Q8IUR5 882 aa12.94□□□□□ -0.34
USF1-201ENST00000368019 DIS3L2Q8IYB7 885 aaKnown RBP12.94□□□□□ -0.34
USF1-201ENST00000368019 STAG1Q8WVM7 1258 aa12.94□□□□□ -0.34
USF1-201ENST00000368019 FERMT2Q96AC1 680 aa12.94□□□□□ -0.34
USF1-201ENST00000368019 COA7Q96BR5 231 aa12.94□□□□□ -0.34
USF1-201ENST00000368019 CLIC6Q96NY7 704 aa12.94□□□□□ -0.34
USF1-201ENST00000368019 STRBPQ96SI9 672 aaKnown RBP12.94□□□□□ -0.34
USF1-201ENST00000368019 RNF26Q9BY78 433 aaPredicted RBP12.94□□□□□ -0.34
USF1-201ENST00000368019 ASCC2Q9H1I8 757 aaPredicted RBP12.94□□□□□ -0.34
USF1-201ENST00000368019 DHX36Q9H2U1 1008 aaKnown RBP12.94□□□□□ -0.34
USF1-201ENST00000368019 LRP2BPQ9P2M1 347 aa12.94□□□□□ -0.34
USF1-201ENST00000368019 PI4KBQ9UBF8 816 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms