RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 TACC1O75410 805 aa13.72□□□□□ -0.21
PTPN7-202ENST00000367279 RPS6KA4O75676 772 aa13.72□□□□□ -0.21
PTPN7-202ENST00000367279 ACTN2P35609 894 aa13.72□□□□□ -0.21
PTPN7-202ENST00000367279 PRPHP41219 470 aa13.72□□□□□ -0.21
PTPN7-202ENST00000367279 UBE2SQ16763 222 aa13.72□□□□□ -0.21
PTPN7-202ENST00000367279 DAGLBQ8NCG7 672 aa13.72□□□□□ -0.21
PTPN7-202ENST00000367279 LZTS2Q9BRK4 669 aa13.72□□□□□ -0.21
PTPN7-202ENST00000367279 CUEDC2Q9H467 287 aa13.72□□□□□ -0.21
PTPN7-202ENST00000367279 MKRN1Q9UHC7 482 aaKnown RBP13.72□□□□□ -0.21
PTPN7-202ENST00000367279 EIF3CLB5ME19 914 aaKnown RBP13.71□□□□□ -0.21
PTPN7-202ENST00000367279 C6orf229H3BNL8 230 aa13.71□□□□□ -0.21
PTPN7-202ENST00000367279 BUB1O43683 1085 aa13.71□□□□□ -0.21
PTPN7-202ENST00000367279 SLC7A5Q01650 507 aa13.71□□□□□ -0.21
PTPN7-202ENST00000367279 MIIPQ5JXC2 388 aa13.71□□□□□ -0.21
PTPN7-202ENST00000367279 MFSD14BQ5SR56 506 aa13.71□□□□□ -0.21
PTPN7-202ENST00000367279 CNBD1Q8NA66 436 aa13.71□□□□□ -0.21
PTPN7-202ENST00000367279 GOLGA5Q8TBA6 731 aa13.71□□□□□ -0.21
PTPN7-202ENST00000367279 EIF3CQ99613 913 aaKnown RBP13.71□□□□□ -0.21
PTPN7-202ENST00000367279 NDST4Q9H3R1 872 aa13.71□□□□□ -0.21
PTPN7-202ENST00000367279 KANSL2Q9H9L4 492 aa13.71□□□□□ -0.21
PTPN7-202ENST00000367279 EHD2Q9NZN4 543 aa13.71□□□□□ -0.21
PTPN7-202ENST00000367279 RSPH14Q9UHP6 348 aa13.71□□□□□ -0.21
PTPN7-202ENST00000367279 MPHOSPH10O00566 681 aaKnown RBP13.71□□□□□ -0.22
PTPN7-202ENST00000367279 NCK2O43639 380 aa13.71□□□□□ -0.22
PTPN7-202ENST00000367279 VAV2P52735 878 aa13.71□□□□□ -0.22
PTPN7-202ENST00000367279 CACNB1Q02641 598 aaPredicted RBP13.71□□□□□ -0.22
PTPN7-202ENST00000367279 CCDC40Q4G0X9 1142 aa13.71□□□□□ -0.22
PTPN7-202ENST00000367279 TMED8Q6PL24 325 aaPredicted RBP13.71□□□□□ -0.22
PTPN7-202ENST00000367279 GLIS3Q8NEA6 775 aa13.71□□□□□ -0.22
PTPN7-202ENST00000367279 FAM71BQ8TC56 605 aa13.71□□□□□ -0.22
PTPN7-202ENST00000367279 LARP4BQ92615 738 aaKnown RBP13.71□□□□□ -0.22
PTPN7-202ENST00000367279 NGLY1Q96IV0 654 aa13.71□□□□□ -0.22
PTPN7-202ENST00000367279 C7orf25Q9BPX7 421 aa13.71□□□□□ -0.22
PTPN7-202ENST00000367279 RABEP2Q9H5N1 569 aa13.71□□□□□ -0.22
PTPN7-202ENST00000367279 CAPN6Q9Y6Q1 641 aa13.71□□□□□ -0.22
PTPN7-202ENST00000367279 SCN7AQ01118 1682 aa13.71□□□□□ -0.22
PTPN7-202ENST00000367279 ANKRD65E5RJM6 399 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 SLC37A4O43826 429 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 TM4SF1P30408 202 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 KIF11P52732 1056 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 VWA3BQ502W6 1294 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 KRT79Q5XKE5 535 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 NELFCDQ8IXH7 590 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 CCDC170Q8IYT3 715 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 MMTAG2Q9BU76 263 aaKnown RBP13.7□□□□□ -0.22
PTPN7-202ENST00000367279 PCDHA13Q9Y5I0 950 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 CCDC88AQ3V6T2 1871 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 LRRC53A6NM62 1247 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 RIMBP2O15034 1052 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 TUBBP07437 444 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 ADCY7P51828 1080 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 EZH2Q15910 746 aaKnown RBP13.7□□□□□ -0.22
PTPN7-202ENST00000367279 NFRKBQ6P4R8 1299 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 RETREG2Q8NC44 543 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 NUDT12Q9BQG2 462 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 SPZ1Q9BXG8 430 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 TRAF5O00463 557 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 ZNF263O14978 683 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 MYBL2P10244 700 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 MCM3P25205 808 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 SLC16A2P36021 539 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 MAGEA1P43355 309 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 GPSM2P81274 684 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 GRB10Q13322 594 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 GRAPQ13588 217 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 MEA1Q16626 185 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 PAPD7Q5XG87 772 aaKnown RBP13.7□□□□□ -0.22
PTPN7-202ENST00000367279 FOXR1Q6PIV2 292 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 GRAPLQ8TC17 118 aaPredicted RBP13.7□□□□□ -0.22
PTPN7-202ENST00000367279 ANKS1AQ92625 1134 aa13.7□□□□□ -0.22
PTPN7-202ENST00000367279 RTFDC1Q9BY42 306 aaPredicted RBP13.7□□□□□ -0.22
PTPN7-202ENST00000367279 DLEC1Q9Y238 1755 aa13.69□□□□□ -0.22
PTPN7-202ENST00000367279 RNASE9P60153 205 aaKnown RBP13.69□□□□□ -0.22
PTPN7-202ENST00000367279 RASSF7Q02833 373 aa13.69□□□□□ -0.22
PTPN7-202ENST00000367279 WDR93Q6P2C0 686 aa13.69□□□□□ -0.22
PTPN7-202ENST00000367279 SND1Q7KZF4 910 aaKnown RBP eCLIP13.69□□□□□ -0.22
PTPN7-202ENST00000367279 TMC4Q7Z404 712 aa13.69□□□□□ -0.22
PTPN7-202ENST00000367279 AFAP1L1Q8TED9 768 aa13.69□□□□□ -0.22
PTPN7-202ENST00000367279 COG1Q8WTW3 980 aa13.69□□□□□ -0.22
PTPN7-202ENST00000367279 TSG101Q99816 390 aa13.69□□□□□ -0.22
PTPN7-202ENST00000367279 TTYH3Q9C0H2 523 aa13.69□□□□□ -0.22
PTPN7-202ENST00000367279 MAGEF1Q9HAY2 307 aa13.69□□□□□ -0.22
PTPN7-202ENST00000367279 ARHGAP20Q9P2F6 1191 aa13.69□□□□□ -0.22
PTPN7-202ENST00000367279 LCMT1Q9UIC8 334 aa13.69□□□□□ -0.22
PTPN7-202ENST00000367279 LEMD3Q9Y2U8 911 aa13.69□□□□□ -0.22
PTPN7-202ENST00000367279 MYH10P35580 1976 aa13.69□□□□□ -0.22
PTPN7-202ENST00000367279 DNAJC21Q5F1R6 531 aaKnown RBP13.69□□□□□ -0.22
PTPN7-202ENST00000367279 IQCEQ6IPM2 695 aa13.69□□□□□ -0.22
PTPN7-202ENST00000367279 DPP8Q6V1X1 898 aaPredicted RBP13.69□□□□□ -0.22
PTPN7-202ENST00000367279 NEDD1Q8NHV4 660 aa13.69□□□□□ -0.22
PTPN7-202ENST00000367279 DDX12PQ92771 950 aa13.69□□□□□ -0.22
PTPN7-202ENST00000367279 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.69□□□□□ -0.22
PTPN7-202ENST00000367279 RAB34Q9BZG1 259 aa13.69□□□□□ -0.22
PTPN7-202ENST00000367279 CD209Q9NNX6 404 aa13.69□□□□□ -0.22
PTPN7-202ENST00000367279 TRIM66O15016 1216 aa13.68□□□□□ -0.22
PTPN7-202ENST00000367279 GGCXP38435 758 aa13.68□□□□□ -0.22
PTPN7-202ENST00000367279 GFPT1Q06210 699 aaPredicted RBP13.68□□□□□ -0.22
PTPN7-202ENST00000367279 ALS2CR12Q96Q35 445 aa13.68□□□□□ -0.22
PTPN7-202ENST00000367279 SELENOOQ9BVL4 669 aa13.68□□□□□ -0.22
PTPN7-202ENST00000367279 LAMB2P55268 1798 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms