RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 SCN10AQ9Y5Y9 1956 aa17.28■□□□□ 0.36
CTSD-202ENST00000367196 A6NJR5 290 aa17.28■□□□□ 0.36
CTSD-202ENST00000367196 PTGS1P23219 599 aa17.28■□□□□ 0.36
CTSD-202ENST00000367196 SART3Q15020 963 aaKnown RBP17.28■□□□□ 0.36
CTSD-202ENST00000367196 RAB30Q15771 203 aa17.28■□□□□ 0.36
CTSD-202ENST00000367196 TMEM63BQ5T3F8 832 aa17.28■□□□□ 0.36
CTSD-202ENST00000367196 RASIP1Q5U651 963 aa17.28■□□□□ 0.36
CTSD-202ENST00000367196 NFRKBQ6P4R8 1299 aa17.28■□□□□ 0.36
CTSD-202ENST00000367196 HERVK_113Q902F9 699 aa17.28■□□□□ 0.36
CTSD-202ENST00000367196 AMNQ9BXJ7 453 aa17.28■□□□□ 0.36
CTSD-202ENST00000367196 TRPV6Q9H1D0 765 aa17.28■□□□□ 0.36
CTSD-202ENST00000367196 CPVLQ9H3G5 476 aa17.28■□□□□ 0.36
CTSD-202ENST00000367196 CUL9Q8IWT3 2517 aa17.28■□□□□ 0.36
CTSD-202ENST00000367196 FGBP02675 491 aa17.27■□□□□ 0.36
CTSD-202ENST00000367196 ACRP10323 421 aa17.27■□□□□ 0.36
CTSD-202ENST00000367196 GSPT1P15170 499 aaKnown RBP17.27■□□□□ 0.36
CTSD-202ENST00000367196 PTPN11Q06124 597 aaPredicted RBP17.27■□□□□ 0.36
CTSD-202ENST00000367196 STXBP2Q15833 593 aa17.27■□□□□ 0.36
CTSD-202ENST00000367196 FAM47CQ5HY64 1035 aa17.27■□□□□ 0.36
CTSD-202ENST00000367196 C16orf59Q7L2K0 433 aa17.27■□□□□ 0.36
CTSD-202ENST00000367196 RALYLQ86SE5 291 aaKnown RBP17.27■□□□□ 0.36
CTSD-202ENST00000367196 SYTL5Q8TDW5 730 aaPredicted RBP17.27■□□□□ 0.36
CTSD-202ENST00000367196 MYLIPQ8WY64 445 aa17.27■□□□□ 0.36
CTSD-202ENST00000367196 RMDN3Q96TC7 470 aa17.27■□□□□ 0.36
CTSD-202ENST00000367196 ZNF576Q9H609 170 aa17.27■□□□□ 0.36
CTSD-202ENST00000367196 JMJD4Q9H9V9 463 aa17.27■□□□□ 0.36
CTSD-202ENST00000367196 MAP3K20Q9NYL2 800 aaKnown RBP17.27■□□□□ 0.36
CTSD-202ENST00000367196 MSRAQ9UJ68 235 aa17.27■□□□□ 0.36
CTSD-202ENST00000367196 KIAA1217Q5T5P2 1943 aa17.26■□□□□ 0.35
CTSD-202ENST00000367196 GH1P01241 217 aa17.26■□□□□ 0.35
CTSD-202ENST00000367196 CCL23P55773 120 aa17.26■□□□□ 0.35
CTSD-202ENST00000367196 ARHGEF16Q5VV41 709 aa17.26■□□□□ 0.35
CTSD-202ENST00000367196 SAMD3Q8N6K7 520 aa17.26■□□□□ 0.35
CTSD-202ENST00000367196 VAT1LQ9HCJ6 419 aa17.26■□□□□ 0.35
CTSD-202ENST00000367196 KLRF2D3W0D1 207 aa17.25■□□□□ 0.35
CTSD-202ENST00000367196 PDE4AP27815 886 aa17.25■□□□□ 0.35
CTSD-202ENST00000367196 SEC23AQ15436 765 aa17.25■□□□□ 0.35
CTSD-202ENST00000367196 PBX4Q9BYU1 374 aa17.25■□□□□ 0.35
CTSD-202ENST00000367196 NOD1Q9Y239 953 aa17.25■□□□□ 0.35
CTSD-202ENST00000367196 UMODL1Q5DID0 1318 aa17.24■□□□□ 0.35
CTSD-202ENST00000367196 PITPNM1O00562 1244 aa17.24■□□□□ 0.35
CTSD-202ENST00000367196 IFIT3O14879 490 aaKnown RBP17.24■□□□□ 0.35
CTSD-202ENST00000367196 ZBTB5O15062 677 aa17.24■□□□□ 0.35
CTSD-202ENST00000367196 EIF3JO75822 258 aaKnown RBP17.24■□□□□ 0.35
CTSD-202ENST00000367196 CFBP00751 764 aa17.24■□□□□ 0.35
CTSD-202ENST00000367196 CHMLP26374 656 aa17.24■□□□□ 0.35
CTSD-202ENST00000367196 RFC2P35250 354 aa17.24■□□□□ 0.35
CTSD-202ENST00000367196 NBPF20Q3BBV1 942 aa17.24■□□□□ 0.35
CTSD-202ENST00000367196 SEPT14Q6ZU15 432 aa17.24■□□□□ 0.35
CTSD-202ENST00000367196 CCDC155Q8N6L0 562 aa17.24■□□□□ 0.35
CTSD-202ENST00000367196 NCOA7Q8NI08 942 aa17.24■□□□□ 0.35
CTSD-202ENST00000367196 TAAR1Q96RJ0 339 aa17.24■□□□□ 0.35
CTSD-202ENST00000367196 GAS2L1Q99501 681 aaPredicted RBP17.24■□□□□ 0.35
CTSD-202ENST00000367196 WNT8AQ9H1J5 351 aa17.24■□□□□ 0.35
CTSD-202ENST00000367196 IL25Q9H293 177 aa17.24■□□□□ 0.35
CTSD-202ENST00000367196 TRMT13Q9NUP7 481 aaKnown RBP17.24■□□□□ 0.35
CTSD-202ENST00000367196 UNC80Q8N2C7 3258 aa17.24■□□□□ 0.35
CTSD-202ENST00000367196 TANC1Q9C0D5 1861 aa17.23■□□□□ 0.35
CTSD-202ENST00000367196 CYP21A2P08686 494 aa17.23■□□□□ 0.35
CTSD-202ENST00000367196 ACTN1P12814 892 aa17.23■□□□□ 0.35
CTSD-202ENST00000367196 CASTP20810 708 aaKnown RBP17.23■□□□□ 0.35
CTSD-202ENST00000367196 HSD17B4P51659 736 aa17.23■□□□□ 0.35
CTSD-202ENST00000367196 GHRHRQ02643 423 aa17.23■□□□□ 0.35
CTSD-202ENST00000367196 BFSP2Q13515 415 aa17.23■□□□□ 0.35
CTSD-202ENST00000367196 WTAPQ15007 396 aa17.23■□□□□ 0.35
CTSD-202ENST00000367196 CCDC62Q6P9F0 684 aa17.23■□□□□ 0.35
CTSD-202ENST00000367196 CYB5R4Q7L1T6 521 aa17.23■□□□□ 0.35
CTSD-202ENST00000367196 OTOP2Q7RTS6 562 aa17.23■□□□□ 0.35
CTSD-202ENST00000367196 STAG2Q8N3U4 1231 aa17.23■□□□□ 0.35
CTSD-202ENST00000367196 RETREG2Q8NC44 543 aa17.23■□□□□ 0.35
CTSD-202ENST00000367196 COPS5Q92905 334 aa17.23■□□□□ 0.35
CTSD-202ENST00000367196 PXMP2Q9NR77 195 aa17.23■□□□□ 0.35
CTSD-202ENST00000367196 MAD2L2Q9UI95 211 aa17.23■□□□□ 0.35
CTSD-202ENST00000367196 SLC4A7Q9Y6M7 1214 aa17.23■□□□□ 0.35
CTSD-202ENST00000367196 PALM3A6NDB9 673 aaPredicted RBP17.22■□□□□ 0.35
CTSD-202ENST00000367196 ARIH2O95376 493 aa17.22■□□□□ 0.35
CTSD-202ENST00000367196 MMP3P08254 477 aa17.22■□□□□ 0.35
CTSD-202ENST00000367196 EIF2AK2P19525 551 aaKnown RBP17.22■□□□□ 0.35
CTSD-202ENST00000367196 GRIN2CQ14957 1233 aa17.22■□□□□ 0.35
CTSD-202ENST00000367196 KCNV1Q6PIU1 500 aa17.22■□□□□ 0.35
CTSD-202ENST00000367196 EMID1Q96A84 441 aaPredicted RBP17.22■□□□□ 0.35
CTSD-202ENST00000367196 MTMR8Q96EF0 704 aa17.22■□□□□ 0.35
CTSD-202ENST00000367196 KATNAL1Q9BW62 490 aa17.22■□□□□ 0.35
CTSD-202ENST00000367196 COL20A1Q9P218 1284 aa17.22■□□□□ 0.35
CTSD-202ENST00000367196 PCDHA1Q9Y5I3 950 aa17.22■□□□□ 0.35
CTSD-202ENST00000367196 MRVI1Q9Y6F6 885 aa17.22■□□□□ 0.35
CTSD-202ENST00000367196 ZBBXA8MT70 800 aa17.21■□□□□ 0.35
CTSD-202ENST00000367196 SGSM2O43147 1006 aa17.21■□□□□ 0.35
CTSD-202ENST00000367196 NR3C2P08235 984 aa17.21■□□□□ 0.35
CTSD-202ENST00000367196 CYP2C9P11712 490 aa17.21■□□□□ 0.35
CTSD-202ENST00000367196 GRM4Q14833 912 aa17.21■□□□□ 0.35
CTSD-202ENST00000367196 DGKDQ16760 1214 aa17.21■□□□□ 0.35
CTSD-202ENST00000367196 LY6KQ17RY6 165 aa17.21■□□□□ 0.35
CTSD-202ENST00000367196 CATIPQ7Z7H3 387 aa17.21■□□□□ 0.35
CTSD-202ENST00000367196 HOMER1Q86YM7 354 aa17.21■□□□□ 0.35
CTSD-202ENST00000367196 AFG1LQ8WV93 481 aa17.21■□□□□ 0.35
CTSD-202ENST00000367196 TBC1D5Q92609 795 aa17.21■□□□□ 0.35
CTSD-202ENST00000367196 SCLYQ96I15 445 aa17.21■□□□□ 0.35
CTSD-202ENST00000367196 SLC28A3Q9HAS3 691 aa17.21■□□□□ 0.35
CTSD-202ENST00000367196 CXXC1Q9P0U4 656 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms