RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 PHKG2P15735 406 aa17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 PI4K2BQ8TCG2 481 aa17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 TM6SF1Q9BZW5 370 aa17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 SLC39A2Q9NP94 309 aa17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 STK17AQ9UEE5 414 aa17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 MYO1EQ12965 1108 aa17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 INHBAP08476 426 aa17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 ARL4AP40617 200 aa17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 ADKP55263 362 aaKnown RBP17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 KRT33BQ14525 404 aa17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 ELF2Q15723 593 aa17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 EXOC3L4Q17RC7 722 aa17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 CARD14Q9BXL6 1004 aa17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 DPH5Q9H2P9 285 aa17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 SGK1O00141 431 aa17.09■□□□□ 0.33
NUCKS1-201ENST00000367142 NVLO15381 856 aaKnown RBP17.09■□□□□ 0.33
NUCKS1-201ENST00000367142 TTLL1O95922 423 aa17.09■□□□□ 0.33
NUCKS1-201ENST00000367142 CYP4A11Q02928 519 aa17.09■□□□□ 0.33
NUCKS1-201ENST00000367142 THOC5Q13769 683 aaKnown RBP17.09■□□□□ 0.33
NUCKS1-201ENST00000367142 ATP10DQ9P241 1426 aa17.09■□□□□ 0.33
NUCKS1-201ENST00000367142 ACTN1P12814 892 aa17.09■□□□□ 0.33
NUCKS1-201ENST00000367142 PDE1CQ14123 709 aaPredicted RBP17.09■□□□□ 0.33
NUCKS1-201ENST00000367142 FAM196AQ6ZSG2 479 aa17.09■□□□□ 0.33
NUCKS1-201ENST00000367142 SLC4A1P02730 911 aa17.09■□□□□ 0.33
NUCKS1-201ENST00000367142 WDR11Q9BZH6 1224 aa17.09■□□□□ 0.33
NUCKS1-201ENST00000367142 KIAA1024Q9UPX6 916 aa17.09■□□□□ 0.33
NUCKS1-201ENST00000367142 MAP3K15Q6ZN16 1313 aa17.09■□□□□ 0.33
NUCKS1-201ENST00000367142 GJA10Q969M2 543 aa17.09■□□□□ 0.33
NUCKS1-201ENST00000367142 ATXN8OSP0DMR3 200 aa17.08■□□□□ 0.33
NUCKS1-201ENST00000367142 SF3A3Q12874 501 aaKnown RBP eCLIP17.08■□□□□ 0.33
NUCKS1-201ENST00000367142 NDUFAF2Q8N183 169 aa17.08■□□□□ 0.33
NUCKS1-201ENST00000367142 RIPOR2Q9Y4F9 1068 aa17.08■□□□□ 0.33
NUCKS1-201ENST00000367142 ERBB4Q15303 1308 aa17.08■□□□□ 0.33
NUCKS1-201ENST00000367142 MYO1FO00160 1098 aa17.08■□□□□ 0.33
NUCKS1-201ENST00000367142 SART1O43290 800 aaKnown RBP17.08■□□□□ 0.33
NUCKS1-201ENST00000367142 SIX6OS1Q8N1H7 587 aa17.08■□□□□ 0.33
NUCKS1-201ENST00000367142 CCNYQ8ND76 341 aa17.08■□□□□ 0.33
NUCKS1-201ENST00000367142 GDAP1Q8TB36 358 aa17.08■□□□□ 0.33
NUCKS1-201ENST00000367142 MICAL1Q8TDZ2 1067 aa17.08■□□□□ 0.33
NUCKS1-201ENST00000367142 PGBD1Q96JS3 809 aa17.08■□□□□ 0.33
NUCKS1-201ENST00000367142 PSMC2P35998 433 aaKnown RBP17.08■□□□□ 0.32
NUCKS1-201ENST00000367142 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.08■□□□□ 0.32
NUCKS1-201ENST00000367142 ZBED2Q9BTP6 218 aa17.08■□□□□ 0.32
NUCKS1-201ENST00000367142 HSPA8P11142 646 aaKnown RBP17.08■□□□□ 0.32
NUCKS1-201ENST00000367142 ATP6V1E1P36543 226 aa17.08■□□□□ 0.32
NUCKS1-201ENST00000367142 EPHB1P54762 984 aa17.08■□□□□ 0.32
NUCKS1-201ENST00000367142 LRRC8CQ8TDW0 803 aa17.08■□□□□ 0.32
NUCKS1-201ENST00000367142 ZNF526Q8TF50 670 aaPredicted RBP17.08■□□□□ 0.32
NUCKS1-201ENST00000367142 GBP5Q96PP8 586 aa17.08■□□□□ 0.32
NUCKS1-201ENST00000367142 LRRC4Q9HBW1 653 aa17.08■□□□□ 0.32
NUCKS1-201ENST00000367142 KIF24Q5T7B8 1368 aa17.08■□□□□ 0.32
NUCKS1-201ENST00000367142 STK25O00506 426 aa17.08■□□□□ 0.32
NUCKS1-201ENST00000367142 CC2D2BQ6DHV5 1058 aa17.08■□□□□ 0.32
NUCKS1-201ENST00000367142 CPP00450 1065 aa17.07■□□□□ 0.32
NUCKS1-201ENST00000367142 SPICE1Q8N0Z3 855 aa17.07■□□□□ 0.32
NUCKS1-201ENST00000367142 PRPF38AQ8NAV1 312 aaKnown RBP17.07■□□□□ 0.32
NUCKS1-201ENST00000367142 XPO4Q9C0E2 1151 aaKnown RBP17.07■□□□□ 0.32
NUCKS1-201ENST00000367142 CUEDC2Q9H467 287 aa17.07■□□□□ 0.32
NUCKS1-201ENST00000367142 ORC6Q9Y5N6 252 aa17.07■□□□□ 0.32
NUCKS1-201ENST00000367142 ATP10AO60312 1499 aa17.07■□□□□ 0.32
NUCKS1-201ENST00000367142 hCG_1984214I3L0E3 225 aa17.07■□□□□ 0.32
NUCKS1-201ENST00000367142 BAG2O95816 211 aa17.07■□□□□ 0.32
NUCKS1-201ENST00000367142 ZNF713Q8N859 430 aaPredicted RBP17.07■□□□□ 0.32
NUCKS1-201ENST00000367142 RNF139Q8WU17 664 aa17.07■□□□□ 0.32
NUCKS1-201ENST00000367142 SPDL1Q96EA4 605 aa17.07■□□□□ 0.32
NUCKS1-201ENST00000367142 TCP1P17987 556 aaKnown RBP17.07■□□□□ 0.32
NUCKS1-201ENST00000367142 TMEM206Q9H813 350 aa17.07■□□□□ 0.32
NUCKS1-201ENST00000367142 GSTA4O15217 222 aa17.07■□□□□ 0.32
NUCKS1-201ENST00000367142 PFKFB2O60825 505 aa17.07■□□□□ 0.32
NUCKS1-201ENST00000367142 PPARGP37231 505 aaPredicted RBP17.07■□□□□ 0.32
NUCKS1-201ENST00000367142 GNGT2O14610 69 aa17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 CRKLP46109 303 aaKnown RBP17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 UBXN2AP68543 259 aa17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 PHEXP78562 749 aa17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 ARHGEF18Q6ZSZ5 1173 aa17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 ARMCX2Q7L311 632 aa17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 TRIM42Q8IWZ5 723 aa17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 ELMOD1Q8N336 334 aa17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 OLA1Q9NTK5 396 aaKnown RBP17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 PNMA3Q9UL41 463 aa17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 MCF2LO15068 1137 aa17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 DNAAF3Q8N9W5 541 aa17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 CFAP61Q8NHU2 1237 aa17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 CEP170P1Q96L14 293 aa17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 KIAA1468Q9P260 1216 aa17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 KIAA0232Q92628 1395 aa17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 UGGT2Q9NYU1 1516 aa17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 LOC102724428A0A0B4J2F2 783 aa17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 PSAPP07602 524 aa17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 OAS2P29728 719 aaKnown RBP17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 SIK1P57059 783 aa17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 PCDHA4Q9UN74 947 aa17.06■□□□□ 0.32
NUCKS1-201ENST00000367142 BRD3Q15059 726 aa17.05■□□□□ 0.32
NUCKS1-201ENST00000367142 SURF1Q15526 300 aa17.05■□□□□ 0.32
NUCKS1-201ENST00000367142 ADAT2Q7Z6V5 191 aaKnown RBP17.05■□□□□ 0.32
NUCKS1-201ENST00000367142 KANSL2Q9H9L4 492 aa17.05■□□□□ 0.32
NUCKS1-201ENST00000367142 CIITAP33076 1130 aa17.05■□□□□ 0.32
NUCKS1-201ENST00000367142 SERPINB6P35237 376 aa17.05■□□□□ 0.32
NUCKS1-201ENST00000367142 PTPROQ16827 1216 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms