RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 RPS6KA4O75676 772 aa10.07□□□□□ -0.8
H3F3A-201ENST00000366813 GRK4P32298 578 aa10.07□□□□□ -0.8
H3F3A-201ENST00000366813 ECE1P42892 770 aa10.07□□□□□ -0.8
H3F3A-201ENST00000366813 CDK8P49336 464 aa10.07□□□□□ -0.8
H3F3A-201ENST00000366813 AMPHP49418 695 aa10.07□□□□□ -0.8
H3F3A-201ENST00000366813 RPS26P62854 115 aaKnown RBP10.07□□□□□ -0.8
H3F3A-201ENST00000366813 KCNMB1Q16558 191 aa10.07□□□□□ -0.8
H3F3A-201ENST00000366813 MAP3K11Q16584 847 aa10.07□□□□□ -0.8
H3F3A-201ENST00000366813 NKG7Q16617 165 aa10.07□□□□□ -0.8
H3F3A-201ENST00000366813 ZNF746Q6NUN9 644 aaPredicted RBP10.07□□□□□ -0.8
H3F3A-201ENST00000366813 KSR1Q8IVT5 923 aa10.07□□□□□ -0.8
H3F3A-201ENST00000366813 MFSD4AQ8N468 514 aa10.07□□□□□ -0.8
H3F3A-201ENST00000366813 XAGE3Q8WTP9 111 aa10.07□□□□□ -0.8
H3F3A-201ENST00000366813 GAL3ST3Q96A11 431 aa10.07□□□□□ -0.8
H3F3A-201ENST00000366813 MAP3K19Q56UN5 1328 aa10.07□□□□□ -0.8
H3F3A-201ENST00000366813 SBNO2Q9Y2G9 1366 aa10.06□□□□□ -0.8
H3F3A-201ENST00000366813 CD163L1Q9NR16 1453 aa10.06□□□□□ -0.8
H3F3A-201ENST00000366813 ITGB4P16144 1822 aa10.06□□□□□ -0.8
H3F3A-201ENST00000366813 LTBP1Q14766 1721 aa10.06□□□□□ -0.8
H3F3A-201ENST00000366813 CBX7O95931 251 aa10.06□□□□□ -0.8
H3F3A-201ENST00000366813 CYP7A1P22680 504 aa10.06□□□□□ -0.8
H3F3A-201ENST00000366813 CAP2P40123 477 aa10.06□□□□□ -0.8
H3F3A-201ENST00000366813 AFMP43652 599 aa10.06□□□□□ -0.8
H3F3A-201ENST00000366813 LIG3P49916 1009 aa10.06□□□□□ -0.8
H3F3A-201ENST00000366813 RAD51AP2Q09MP3 1159 aa10.06□□□□□ -0.8
H3F3A-201ENST00000366813 LETMD1Q6P1Q0 360 aa10.06□□□□□ -0.8
H3F3A-201ENST00000366813 ZSWIM9Q86XI8 627 aa10.06□□□□□ -0.8
H3F3A-201ENST00000366813 SLC38A3Q99624 504 aa10.06□□□□□ -0.8
H3F3A-201ENST00000366813 CARS2Q9HA77 564 aaKnown RBP10.06□□□□□ -0.8
H3F3A-201ENST00000366813 COPRSQ9NQ92 184 aa10.06□□□□□ -0.8
H3F3A-201ENST00000366813 TMOD3Q9NYL9 352 aa10.06□□□□□ -0.8
H3F3A-201ENST00000366813 PCDHB5Q9Y5E4 795 aa10.06□□□□□ -0.8
H3F3A-201ENST00000366813 PRR33A8MZF0 331 aa10.05□□□□□ -0.8
H3F3A-201ENST00000366813 PWP1Q13610 501 aa10.05□□□□□ -0.8
H3F3A-201ENST00000366813 SEPT6Q14141 434 aa10.05□□□□□ -0.8
H3F3A-201ENST00000366813 RELL1Q8IUW5 271 aa10.05□□□□□ -0.8
H3F3A-201ENST00000366813 RIN3Q8TB24 985 aa10.05□□□□□ -0.8
H3F3A-201ENST00000366813 ATP13A1Q9HD20 1204 aa10.05□□□□□ -0.8
H3F3A-201ENST00000366813 KBTBD4Q9NVX7 518 aa10.05□□□□□ -0.8
H3F3A-201ENST00000366813 FAM53CQ9NYF3 392 aa10.05□□□□□ -0.8
H3F3A-201ENST00000366813 LRRC10BA6NIK2 292 aa10.04□□□□□ -0.8
H3F3A-201ENST00000366813 H3BS24 57 aa10.04□□□□□ -0.8
H3F3A-201ENST00000366813 CST3P01034 146 aaPredicted RBP10.04□□□□□ -0.8
H3F3A-201ENST00000366813 ERCC5P28715 1186 aaPredicted RBP10.04□□□□□ -0.8
H3F3A-201ENST00000366813 TM4SF1P30408 202 aa10.04□□□□□ -0.8
H3F3A-201ENST00000366813 MAP2K2P36507 400 aa10.04□□□□□ -0.8
H3F3A-201ENST00000366813 FXR1P51114 621 aaKnown RBP eCLIP10.04□□□□□ -0.8
H3F3A-201ENST00000366813 JAG1P78504 1218 aa10.04□□□□□ -0.8
H3F3A-201ENST00000366813 ZNF124Q15973 351 aa10.04□□□□□ -0.8
H3F3A-201ENST00000366813 ZNF394Q53GI3 561 aa10.04□□□□□ -0.8
H3F3A-201ENST00000366813 PRAMEF13Q5VWM6 474 aa10.04□□□□□ -0.8
H3F3A-201ENST00000366813 DIEXFQ68CQ4 756 aaKnown RBP10.04□□□□□ -0.8
H3F3A-201ENST00000366813 USP48Q86UV5 1035 aa10.04□□□□□ -0.8
H3F3A-201ENST00000366813 C2CD5Q86YS7 1000 aa10.04□□□□□ -0.8
H3F3A-201ENST00000366813 TMEM74Q96NL1 305 aa10.04□□□□□ -0.8
H3F3A-201ENST00000366813 MIR1-1HGQ9H1L0 117 aa10.04□□□□□ -0.8
H3F3A-201ENST00000366813 DDX21Q9NR30 783 aaKnown RBP eCLIP10.04□□□□□ -0.8
H3F3A-201ENST00000366813 CTNND2Q9UQB3 1225 aa10.04□□□□□ -0.8
H3F3A-201ENST00000366813 THSD7BQ9C0I4 1608 aa10.03□□□□□ -0.8
H3F3A-201ENST00000366813 A0A0C4DFX4 3053 aa10.03□□□□□ -0.8
H3F3A-201ENST00000366813 CNTNAP4Q9C0A0 1308 aa10.03□□□□□ -0.8
H3F3A-201ENST00000366813 F6X3S4 739 aa10.03□□□□□ -0.8
H3F3A-201ENST00000366813 CA12O43570 354 aa10.03□□□□□ -0.8
H3F3A-201ENST00000366813 EPHX2P34913 555 aa10.03□□□□□ -0.8
H3F3A-201ENST00000366813 AGMOQ6ZNB7 445 aa10.03□□□□□ -0.8
H3F3A-201ENST00000366813 PHC3Q8NDX5 983 aa10.03□□□□□ -0.8
H3F3A-201ENST00000366813 SEMA3GQ9NS98 782 aa10.03□□□□□ -0.8
H3F3A-201ENST00000366813 DDX41Q9UJV9 622 aaKnown RBP10.03□□□□□ -0.8
H3F3A-201ENST00000366813 TLR6Q9Y2C9 796 aa10.03□□□□□ -0.8
H3F3A-201ENST00000366813 PCDHGB7Q9Y5F8 929 aa10.03□□□□□ -0.8
H3F3A-201ENST00000366813 USP42Q9H9J4 1324 aaKnown RBP10.02□□□□□ -0.81
H3F3A-201ENST00000366813 PGRP06401 933 aa10.02□□□□□ -0.81
H3F3A-201ENST00000366813 ZNF865P0CJ78 1059 aaPredicted RBP10.02□□□□□ -0.81
H3F3A-201ENST00000366813 GBP2P32456 591 aaPredicted RBP10.02□□□□□ -0.81
H3F3A-201ENST00000366813 RACK1P63244 317 aaKnown RBP10.02□□□□□ -0.81
H3F3A-201ENST00000366813 C22orf34Q6ZV56 151 aa10.02□□□□□ -0.81
H3F3A-201ENST00000366813 JARID2Q92833 1246 aaPredicted RBP10.02□□□□□ -0.81
H3F3A-201ENST00000366813 RHOVQ96L33 236 aa10.02□□□□□ -0.81
H3F3A-201ENST00000366813 TGIF2Q9GZN2 237 aa10.02□□□□□ -0.81
H3F3A-201ENST00000366813 HACL1Q9UJ83 578 aa10.02□□□□□ -0.81
H3F3A-201ENST00000366813 TACC3Q9Y6A5 838 aa10.02□□□□□ -0.81
H3F3A-201ENST00000366813 KDRP35968 1356 aa10.01□□□□□ -0.81
H3F3A-201ENST00000366813 GFRA2O00451 464 aa10.01□□□□□ -0.81
H3F3A-201ENST00000366813 CST9Q5W186 159 aa10.01□□□□□ -0.81
H3F3A-201ENST00000366813 CIAPIN1Q6FI81 312 aa10.01□□□□□ -0.81
H3F3A-201ENST00000366813 CDH24Q86UP0 819 aa10.01□□□□□ -0.81
H3F3A-201ENST00000366813 UBE2FQ969M7 185 aa10.01□□□□□ -0.81
H3F3A-201ENST00000366813 TAOK3Q9H2K8 898 aa10.01□□□□□ -0.81
H3F3A-201ENST00000366813 CAPN6Q9Y6Q1 641 aa10.01□□□□□ -0.81
H3F3A-201ENST00000366813 MON2Q7Z3U7 1717 aa10.01□□□□□ -0.81
H3F3A-201ENST00000366813 MINDY4BA8MYZ0 360 aa10□□□□□ -0.81
H3F3A-201ENST00000366813 H0YIN7 160 aa10□□□□□ -0.81
H3F3A-201ENST00000366813 TFE3P19532 575 aaPredicted RBP10□□□□□ -0.81
H3F3A-201ENST00000366813 PDE4BQ07343 736 aa10□□□□□ -0.81
H3F3A-201ENST00000366813 MLANAQ16655 118 aa10□□□□□ -0.81
H3F3A-201ENST00000366813 ZNF654Q8IZM8 581 aa10□□□□□ -0.81
H3F3A-201ENST00000366813 COX4I2Q96KJ9 171 aa10□□□□□ -0.81
H3F3A-201ENST00000366813 FAM84AQ96KN4 292 aa10□□□□□ -0.81
H3F3A-201ENST00000366813 ZSWIM5Q9P217 1185 aa10□□□□□ -0.81
H3F3A-201ENST00000366813 EPB41L3Q9Y2J2 1087 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms