RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 CYP2E1P05181 493 aaPredicted RBP14.77□□□□□ -0.04
LDB3-202ENST00000361373 ITIH3Q06033 890 aa14.77□□□□□ -0.04
LDB3-202ENST00000361373 APOBEC3FQ8IUX4 373 aaKnown RBP14.77□□□□□ -0.04
LDB3-202ENST00000361373 IFT122Q9HBG6 1241 aa14.77□□□□□ -0.04
LDB3-202ENST00000361373 RIPOR2Q9Y4F9 1068 aa14.77□□□□□ -0.04
LDB3-202ENST00000361373 GOLGA6CA6NDK9 693 aa14.77□□□□□ -0.05
LDB3-202ENST00000361373 GOLGA6BA6NDN3 693 aa14.77□□□□□ -0.05
LDB3-202ENST00000361373 SMIM23A6NLE4 172 aa14.77□□□□□ -0.05
LDB3-202ENST00000361373 GOLGA6DP0CG33 693 aa14.77□□□□□ -0.05
LDB3-202ENST00000361373 SARNPP82979 210 aaKnown RBP14.77□□□□□ -0.05
LDB3-202ENST00000361373 TMTC3Q6ZXV5 915 aa14.77□□□□□ -0.05
LDB3-202ENST00000361373 PPM1KQ8N3J5 372 aa14.77□□□□□ -0.05
LDB3-202ENST00000361373 P2RX5Q93086 422 aa14.77□□□□□ -0.05
LDB3-202ENST00000361373 TRIM11Q96F44 468 aa14.77□□□□□ -0.05
LDB3-202ENST00000361373 GOLGA6AQ9NYA3 693 aa14.77□□□□□ -0.05
LDB3-202ENST00000361373 NRKQ7Z2Y5 1582 aa14.77□□□□□ -0.05
LDB3-202ENST00000361373 MROH7-TTC4A0A0A0MT08 1334 aa14.77□□□□□ -0.05
LDB3-202ENST00000361373 ARHGEF40Q8TER5 1519 aa14.77□□□□□ -0.05
LDB3-202ENST00000361373 CAMSAP1Q5T5Y3 1602 aa14.77□□□□□ -0.05
LDB3-202ENST00000361373 DLATP10515 647 aaKnown RBP14.77□□□□□ -0.05
LDB3-202ENST00000361373 TCP1P17987 556 aaKnown RBP14.77□□□□□ -0.05
LDB3-202ENST00000361373 ERCC3P19447 782 aa14.77□□□□□ -0.05
LDB3-202ENST00000361373 LACTBP83111 547 aaPredicted RBP14.77□□□□□ -0.05
LDB3-202ENST00000361373 MAP7D1Q3KQU3 841 aa14.77□□□□□ -0.05
LDB3-202ENST00000361373 SND1Q7KZF4 910 aaKnown RBP eCLIP14.77□□□□□ -0.05
LDB3-202ENST00000361373 CELF1Q92879 486 aaKnown RBP14.77□□□□□ -0.05
LDB3-202ENST00000361373 GJA10Q969M2 543 aa14.77□□□□□ -0.05
LDB3-202ENST00000361373 CCDC127Q96BQ5 260 aa14.77□□□□□ -0.05
LDB3-202ENST00000361373 MMS19Q96T76 1030 aa14.77□□□□□ -0.05
LDB3-202ENST00000361373 CARD6Q9BX69 1037 aa14.77□□□□□ -0.05
LDB3-202ENST00000361373 ECE2O60344 883 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 DTNBO60941 627 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 COPB1P53618 953 aaKnown RBP14.76□□□□□ -0.05
LDB3-202ENST00000361373 SURF1Q15526 300 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 CCDC121Q6ZUS5 278 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 ZNF710Q8N1W2 664 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 GRK7Q8WTQ7 553 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 CACTINQ8WUQ7 758 aaKnown RBP14.76□□□□□ -0.05
LDB3-202ENST00000361373 CEP170P1Q96L14 293 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 KMT5AQ9NQR1 393 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 RAB20Q9NX57 234 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 UTYO14607 1347 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 PHLPP2Q6ZVD8 1323 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 CPDO75976 1380 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 ZNF658Q5TYW1 1059 aaPredicted RBP14.76□□□□□ -0.05
LDB3-202ENST00000361373 CCDC89Q8N998 374 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 RNF169Q8NCN4 708 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 COA7Q96BR5 231 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 CRAMP1Q96RY5 1269 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 TUBGCP2Q9BSJ2 902 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 DIP2CQ9Y2E4 1556 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 NR2F2P24468 414 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 PPP1R21Q6ZMI0 780 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 TBC1D31Q96DN5 1066 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 MED10Q9BTT4 135 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 HYOU1Q9Y4L1 999 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 ABCA6Q8N139 1617 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 CAPN9O14815 690 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 GH2P01242 217 aa14.76□□□□□ -0.05
LDB3-202ENST00000361373 POLR2FP61218 127 aaKnown RBP14.76□□□□□ -0.05
LDB3-202ENST00000361373 SH3RF3Q8TEJ3 882 aaPredicted RBP14.76□□□□□ -0.05
LDB3-202ENST00000361373 CNOT6LQ96LI5 555 aaKnown RBP14.76□□□□□ -0.05
LDB3-202ENST00000361373 STAM2O75886 525 aa14.75□□□□□ -0.05
LDB3-202ENST00000361373 ZNF827Q17R98 1081 aa14.75□□□□□ -0.05
LDB3-202ENST00000361373 RABL6Q3YEC7 729 aaPredicted RBP14.75□□□□□ -0.05
LDB3-202ENST00000361373 AFAP1L2Q8N4X5 818 aa14.75□□□□□ -0.05
LDB3-202ENST00000361373 RASGRP4Q8TDF6 673 aa14.75□□□□□ -0.05
LDB3-202ENST00000361373 ANO3Q9BYT9 981 aa14.75□□□□□ -0.05
LDB3-202ENST00000361373 FEM1BQ9UK73 627 aa14.75□□□□□ -0.05
LDB3-202ENST00000361373 LMNB1P20700 586 aa14.75□□□□□ -0.05
LDB3-202ENST00000361373 PRDX5P30044 214 aa14.75□□□□□ -0.05
LDB3-202ENST00000361373 CCDC6Q16204 474 aa14.75□□□□□ -0.05
LDB3-202ENST00000361373 SRGAP1Q7Z6B7 1085 aa14.75□□□□□ -0.05
LDB3-202ENST00000361373 GIMAP8Q8ND71 665 aaPredicted RBP14.75□□□□□ -0.05
LDB3-202ENST00000361373 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.75□□□□□ -0.05
LDB3-202ENST00000361373 RNF8O76064 485 aa14.75□□□□□ -0.05
LDB3-202ENST00000361373 NSFP46459 744 aaKnown RBP14.75□□□□□ -0.05
LDB3-202ENST00000361373 ADKP55263 362 aaKnown RBP14.75□□□□□ -0.05
LDB3-202ENST00000361373 MYL7Q01449 175 aa14.75□□□□□ -0.05
LDB3-202ENST00000361373 BARGINQ6ZT62 677 aa14.75□□□□□ -0.05
LDB3-202ENST00000361373 ANKRD36BP1Q96IX9 119 aa14.75□□□□□ -0.05
LDB3-202ENST00000361373 VPS18Q9P253 973 aa14.75□□□□□ -0.05
LDB3-202ENST00000361373 NFIXQ14938 502 aa14.75□□□□□ -0.05
LDB3-202ENST00000361373 MAN2A1Q16706 1144 aa14.75□□□□□ -0.05
LDB3-202ENST00000361373 SEPT14Q6ZU15 432 aa14.75□□□□□ -0.05
LDB3-202ENST00000361373 C2orf69Q8N8R5 385 aa14.75□□□□□ -0.05
LDB3-202ENST00000361373 TDRD7Q8NHU6 1098 aaKnown RBP14.75□□□□□ -0.05
LDB3-202ENST00000361373 QRICH2Q9H0J4 1663 aa14.75□□□□□ -0.05
LDB3-202ENST00000361373 CYP2D7A0A087X1C5 515 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 ZBTB5O15062 677 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 ZBTB24O43167 697 aaPredicted RBP14.74□□□□□ -0.05
LDB3-202ENST00000361373 PPP4R3CPQ6ZMV5 832 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 MIGA2Q7L4E1 593 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 FAM186BQ8IYM0 893 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 CCT6BQ92526 530 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 PARVGQ9HBI0 331 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 ANKFY1Q9P2R3 1169 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 USP17L5A8MUK1 530 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 INO80B-WBP1J3KQ70 363 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 IGBP1P78318 339 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms