RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 LMCD1Q9NZU5 365 aa8.73□□□□□ -1.01
CCL28-201ENST00000361115 PCDHAC2Q9Y5I4 1007 aa8.73□□□□□ -1.01
CCL28-201ENST00000361115 IVNS1ABPQ9Y6Y0 642 aa8.73□□□□□ -1.01
CCL28-201ENST00000361115 TNKSO95271 1327 aa8.72□□□□□ -1.01
CCL28-201ENST00000361115 TTC36A6NLP5 189 aa8.72□□□□□ -1.01
CCL28-201ENST00000361115 ABCB7O75027 752 aa8.72□□□□□ -1.01
CCL28-201ENST00000361115 ATP1A3P13637 1013 aa8.72□□□□□ -1.01
CCL28-201ENST00000361115 BTDP43251 543 aa8.72□□□□□ -1.01
CCL28-201ENST00000361115 RHBDL3P58872 404 aa8.72□□□□□ -1.01
CCL28-201ENST00000361115 RTP1P59025 263 aa8.72□□□□□ -1.01
CCL28-201ENST00000361115 LEKR1Q6ZMV7 388 aa8.72□□□□□ -1.01
CCL28-201ENST00000361115 ZSCAN16Q9H4T2 348 aaPredicted RBP8.72□□□□□ -1.01
CCL28-201ENST00000361115 HOXC10Q9NYD6 342 aa8.72□□□□□ -1.01
CCL28-201ENST00000361115 SWAP70Q9UH65 585 aa8.72□□□□□ -1.01
CCL28-201ENST00000361115 COG5Q9UP83 839 aa8.72□□□□□ -1.01
CCL28-201ENST00000361115 A0A1B0GVL5 298 aa8.72□□□□□ -1.01
CCL28-201ENST00000361115 CYP2C8P10632 490 aa8.72□□□□□ -1.01
CCL28-201ENST00000361115 ATP2B1P20020 1258 aa8.72□□□□□ -1.01
CCL28-201ENST00000361115 RFC2P35250 354 aa8.72□□□□□ -1.01
CCL28-201ENST00000361115 NT5C2P49902 561 aa8.72□□□□□ -1.01
CCL28-201ENST00000361115 FANCCQ00597 558 aa8.72□□□□□ -1.01
CCL28-201ENST00000361115 CACNB2Q08289 660 aaPredicted RBP8.72□□□□□ -1.01
CCL28-201ENST00000361115 PUS10Q3MIT2 529 aaKnown RBP8.72□□□□□ -1.01
CCL28-201ENST00000361115 ATG9AQ7Z3C6 839 aa8.72□□□□□ -1.01
CCL28-201ENST00000361115 FMR1NBQ8N0W7 255 aaPredicted RBP8.72□□□□□ -1.01
CCL28-201ENST00000361115 ANKRD13CQ8N6S4 541 aa8.72□□□□□ -1.01
CCL28-201ENST00000361115 ALDH8A1Q9H2A2 487 aaPredicted RBP8.72□□□□□ -1.01
CCL28-201ENST00000361115 ECHDC1Q9NTX5 307 aa8.72□□□□□ -1.01
CCL28-201ENST00000361115 MRFAP1Q9Y605 127 aa8.72□□□□□ -1.01
CCL28-201ENST00000361115 NEDD4P46934 1319 aa8.72□□□□□ -1.01
CCL28-201ENST00000361115 PPFIA3O75145 1194 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 ME1P48163 572 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 APOBRQ0VD83 1088 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 E2F4Q16254 413 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 RASIP1Q5U651 963 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 TATDN1Q6P1N9 297 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 SLC39A5Q6ZMH5 540 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.71□□□□□ -1.01
CCL28-201ENST00000361115 FAM122AQ96E09 287 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 LRCH3Q96II8 777 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 SDF4Q9BRK5 362 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 HSD3B7Q9H2F3 369 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 PLEKHA4Q9H4M7 779 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 ZSWIM4Q9H7M6 989 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.71□□□□□ -1.01
CCL28-201ENST00000361115 MYH1P12882 1939 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 TLR3O15455 904 aaKnown RBP8.71□□□□□ -1.01
CCL28-201ENST00000361115 CCP110O43303 1012 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 NRDCO43847 1150 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 IVLP07476 585 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 ELNP15502 786 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 MCM6Q14566 821 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 EP400NLQ6ZTU2 488 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 RABGGTAQ92696 567 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 EVI5LQ96CN4 794 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 GAS2L1Q99501 681 aaPredicted RBP8.71□□□□□ -1.01
CCL28-201ENST00000361115 LRRC2Q9BYS8 371 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 SIL1Q9H173 461 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 CXXC1Q9P0U4 656 aaPredicted RBP8.71□□□□□ -1.01
CCL28-201ENST00000361115 FAN1Q9Y2M0 1017 aa8.71□□□□□ -1.01
CCL28-201ENST00000361115 NDUFA8P51970 172 aa8.71□□□□□ -1.02
CCL28-201ENST00000361115 GNG11P61952 73 aa8.71□□□□□ -1.02
CCL28-201ENST00000361115 GUCY1B3Q02153 619 aa8.71□□□□□ -1.02
CCL28-201ENST00000361115 ISM2Q6H9L7 571 aa8.71□□□□□ -1.02
CCL28-201ENST00000361115 CATSPERGQ6ZRH7 1159 aa8.71□□□□□ -1.02
CCL28-201ENST00000361115 ZNF589Q86UQ0 364 aaPredicted RBP8.71□□□□□ -1.02
CCL28-201ENST00000361115 TMEM139Q8IV31 216 aa8.71□□□□□ -1.02
CCL28-201ENST00000361115 DHX58Q96C10 678 aa8.71□□□□□ -1.02
CCL28-201ENST00000361115 SEC62Q99442 399 aaKnown RBP8.71□□□□□ -1.02
CCL28-201ENST00000361115 SUGCTQ9HAC7 445 aa8.71□□□□□ -1.02
CCL28-201ENST00000361115 KIAA1468Q9P260 1216 aa8.71□□□□□ -1.02
CCL28-201ENST00000361115 THEGQ9P2T0 379 aa8.71□□□□□ -1.02
CCL28-201ENST00000361115 PCDHA7Q9UN72 937 aa8.71□□□□□ -1.02
CCL28-201ENST00000361115 PA2G4Q9UQ80 394 aaKnown RBP8.71□□□□□ -1.02
CCL28-201ENST00000361115 PPP2R2CQ9Y2T4 447 aa8.71□□□□□ -1.02
CCL28-201ENST00000361115 TMEM232C9JQI7 657 aa8.7□□□□□ -1.02
CCL28-201ENST00000361115 PARNO95453 639 aaKnown RBP8.7□□□□□ -1.02
CCL28-201ENST00000361115 CORO7P57737 925 aa8.7□□□□□ -1.02
CCL28-201ENST00000361115 MRPS5P82675 430 aaKnown RBP8.7□□□□□ -1.02
CCL28-201ENST00000361115 ATP2B2Q01814 1243 aa8.7□□□□□ -1.02
CCL28-201ENST00000361115 SCRN1Q12765 414 aa8.7□□□□□ -1.02
CCL28-201ENST00000361115 LRRC26Q2I0M4 334 aa8.7□□□□□ -1.02
CCL28-201ENST00000361115 Q6ZUG5 572 aa8.7□□□□□ -1.02
CCL28-201ENST00000361115 RNF180Q86T96 592 aa8.7□□□□□ -1.02
CCL28-201ENST00000361115 KIFC2Q96AC6 838 aa8.7□□□□□ -1.02
CCL28-201ENST00000361115 CDX2Q99626 313 aaPredicted RBP8.7□□□□□ -1.02
CCL28-201ENST00000361115 BPIFA3Q9BQP9 254 aa8.7□□□□□ -1.02
CCL28-201ENST00000361115 LAMA4Q16363 1823 aa8.7□□□□□ -1.02
CCL28-201ENST00000361115 RPS6KA5O75582 802 aa8.7□□□□□ -1.02
CCL28-201ENST00000361115 FOSL2P15408 326 aa8.7□□□□□ -1.02
CCL28-201ENST00000361115 TXLNAP40222 546 aa8.7□□□□□ -1.02
CCL28-201ENST00000361115 MLLT3P42568 568 aaPredicted RBP8.7□□□□□ -1.02
CCL28-201ENST00000361115 CCDC102BQ68D86 513 aa8.7□□□□□ -1.02
CCL28-201ENST00000361115 WWC2Q6AWC2 1192 aa8.7□□□□□ -1.02
CCL28-201ENST00000361115 LRRC31Q6UY01 552 aa8.7□□□□□ -1.02
CCL28-201ENST00000361115 SH3BP5LQ7L8J4 393 aa8.7□□□□□ -1.02
CCL28-201ENST00000361115 CLASRPQ8N2M8 674 aaKnown RBP8.7□□□□□ -1.02
CCL28-201ENST00000361115 BANK1Q8NDB2 785 aa8.7□□□□□ -1.02
CCL28-201ENST00000361115 ZNF594Q96JF6 807 aaPredicted RBP8.7□□□□□ -1.02
CCL28-201ENST00000361115 UPF3AQ9H1J1 476 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms