RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 FBXO11Q86XK2 927 aa14.24□□□□□ -0.13
GGPS1-202ENST00000358966 DPF2Q92785 391 aa14.24□□□□□ -0.13
GGPS1-202ENST00000358966 FANCLQ9NW38 375 aa14.24□□□□□ -0.13
GGPS1-202ENST00000358966 IFNKQ9P0W0 207 aa14.24□□□□□ -0.13
GGPS1-202ENST00000358966 DDNO94850 711 aaPredicted RBP14.24□□□□□ -0.13
GGPS1-202ENST00000358966 SMC2O95347 1197 aa14.24□□□□□ -0.13
GGPS1-202ENST00000358966 PLCG1P19174 1290 aa14.24□□□□□ -0.13
GGPS1-202ENST00000358966 MORC3Q14149 939 aa14.24□□□□□ -0.13
GGPS1-202ENST00000358966 CT47A1Q5JQC4 288 aaPredicted RBP14.24□□□□□ -0.13
GGPS1-202ENST00000358966 FKBP1CQ5VVH2 108 aa14.24□□□□□ -0.13
GGPS1-202ENST00000358966 FILIP1Q7Z7B0 1213 aa14.24□□□□□ -0.13
GGPS1-202ENST00000358966 FCHSD1Q86WN1 690 aa14.24□□□□□ -0.13
GGPS1-202ENST00000358966 IQUBQ8NA54 791 aa14.24□□□□□ -0.13
GGPS1-202ENST00000358966 RIOK3O14730 519 aaKnown RBP14.23□□□□□ -0.13
GGPS1-202ENST00000358966 MRPL12P52815 198 aaKnown RBP14.23□□□□□ -0.13
GGPS1-202ENST00000358966 HIRAP54198 1017 aaPredicted RBP14.23□□□□□ -0.13
GGPS1-202ENST00000358966 CYP2W1Q8TAV3 490 aa14.23□□□□□ -0.13
GGPS1-202ENST00000358966 MMTAG2Q9BU76 263 aaKnown RBP14.23□□□□□ -0.13
GGPS1-202ENST00000358966 AMNQ9BXJ7 453 aa14.23□□□□□ -0.13
GGPS1-202ENST00000358966 ANO3Q9BYT9 981 aa14.23□□□□□ -0.13
GGPS1-202ENST00000358966 XPO4Q9C0E2 1151 aaKnown RBP14.23□□□□□ -0.13
GGPS1-202ENST00000358966 GGA3Q9NZ52 723 aa14.23□□□□□ -0.13
GGPS1-202ENST00000358966 ATAD5Q96QE3 1844 aa14.23□□□□□ -0.13
GGPS1-202ENST00000358966 hCG_1984214I3L0E3 225 aa14.23□□□□□ -0.13
GGPS1-202ENST00000358966 CAVIN2O95810 425 aa14.23□□□□□ -0.13
GGPS1-202ENST00000358966 NOP2P46087 812 aaKnown RBP14.23□□□□□ -0.13
GGPS1-202ENST00000358966 NT5DC1Q5TFE4 455 aa14.23□□□□□ -0.13
GGPS1-202ENST00000358966 ZNF713Q8N859 430 aaPredicted RBP14.23□□□□□ -0.13
GGPS1-202ENST00000358966 VCPKMTQ9H867 229 aa14.23□□□□□ -0.13
GGPS1-202ENST00000358966 DDX25Q9UHL0 483 aaKnown RBP14.23□□□□□ -0.13
GGPS1-202ENST00000358966 DDX41Q9UJV9 622 aaKnown RBP14.23□□□□□ -0.13
GGPS1-202ENST00000358966 RRAGBQ5VZM2 374 aa14.22□□□□□ -0.13
GGPS1-202ENST00000358966 CABP7Q86V35 215 aa14.22□□□□□ -0.13
GGPS1-202ENST00000358966 SPATA20Q8TB22 786 aa14.22□□□□□ -0.13
GGPS1-202ENST00000358966 HAS1Q92839 578 aa14.22□□□□□ -0.13
GGPS1-202ENST00000358966 MTMR9Q96QG7 549 aa14.22□□□□□ -0.13
GGPS1-202ENST00000358966 MYCBPQ99417 103 aaPredicted RBP14.22□□□□□ -0.13
GGPS1-202ENST00000358966 SPON1Q9HCB6 807 aa14.22□□□□□ -0.13
GGPS1-202ENST00000358966 GOPCQ9HD26 462 aa14.22□□□□□ -0.13
GGPS1-202ENST00000358966 HOOK1Q9UJC3 728 aaKnown RBP14.22□□□□□ -0.13
GGPS1-202ENST00000358966 PYCARDQ9ULZ3 195 aa14.22□□□□□ -0.13
GGPS1-202ENST00000358966 GDAQ9Y2T3 454 aa14.22□□□□□ -0.13
GGPS1-202ENST00000358966 MORC2Q9Y6X9 1032 aaPredicted RBP14.22□□□□□ -0.13
GGPS1-202ENST00000358966 CFBP00751 764 aa14.22□□□□□ -0.13
GGPS1-202ENST00000358966 ASNSP08243 561 aa14.22□□□□□ -0.13
GGPS1-202ENST00000358966 RPS12P25398 132 aaKnown RBP14.22□□□□□ -0.13
GGPS1-202ENST00000358966 EEF2KMTQ96G04 330 aa14.22□□□□□ -0.13
GGPS1-202ENST00000358966 SAMSN1Q9NSI8 373 aaKnown RBP14.22□□□□□ -0.13
GGPS1-202ENST00000358966 LTBP3Q9NS15 1303 aa14.22□□□□□ -0.13
GGPS1-202ENST00000358966 TBC1D12O60347 775 aa14.21□□□□□ -0.13
GGPS1-202ENST00000358966 TXLNAP40222 546 aa14.21□□□□□ -0.13
GGPS1-202ENST00000358966 STAT3P40763 770 aa14.21□□□□□ -0.13
GGPS1-202ENST00000358966 MYL5Q02045 173 aa14.21□□□□□ -0.13
GGPS1-202ENST00000358966 RAD51AP2Q09MP3 1159 aa14.21□□□□□ -0.13
GGPS1-202ENST00000358966 MTMR2Q13614 643 aa14.21□□□□□ -0.13
GGPS1-202ENST00000358966 HPS3Q969F9 1004 aa14.21□□□□□ -0.13
GGPS1-202ENST00000358966 YBX3P16989 372 aaKnown RBP eCLIP14.21□□□□□ -0.132e-7■■□□□ 13
GGPS1-202ENST00000358966 HNRNPH2P55795 449 aaKnown RBP14.21□□□□□ -0.13
GGPS1-202ENST00000358966 ECM1Q16610 540 aa14.21□□□□□ -0.13
GGPS1-202ENST00000358966 PPP1R18Q6NYC8 613 aa14.21□□□□□ -0.13
GGPS1-202ENST00000358966 HOMER2Q9NSB8 354 aa14.21□□□□□ -0.13
GGPS1-202ENST00000358966 NFE2L3Q9Y4A8 694 aa14.21□□□□□ -0.13
GGPS1-202ENST00000358966 TNFAIP1Q13829 316 aa14.21□□□□□ -0.14
GGPS1-202ENST00000358966 PRR16Q569H4 304 aa14.21□□□□□ -0.14
GGPS1-202ENST00000358966 FAM43BQ6ZT52 329 aaPredicted RBP14.21□□□□□ -0.14
GGPS1-202ENST00000358966 KCNK18Q7Z418 384 aa14.21□□□□□ -0.14
GGPS1-202ENST00000358966 CPXCR1Q8N123 301 aa14.21□□□□□ -0.14
GGPS1-202ENST00000358966 WNK4Q96J92 1243 aa14.21□□□□□ -0.14
GGPS1-202ENST00000358966 AGBL1Q96MI9 1066 aa14.21□□□□□ -0.14
GGPS1-202ENST00000358966 BPIFA3Q9BQP9 254 aa14.21□□□□□ -0.14
GGPS1-202ENST00000358966 GPRC5DQ9NZD1 345 aa14.21□□□□□ -0.14
GGPS1-202ENST00000358966 FAM86B1E9PN63 330 aa14.2□□□□□ -0.14
GGPS1-202ENST00000358966 FAM86B2P0C5J1 330 aa14.2□□□□□ -0.14
GGPS1-202ENST00000358966 GOLGA8FQ08AF8 430 aa14.2□□□□□ -0.14
GGPS1-202ENST00000358966 GOLGA8DPQ0D2H9 430 aa14.2□□□□□ -0.14
GGPS1-202ENST00000358966 KANK3Q6NY19 840 aa14.2□□□□□ -0.14
GGPS1-202ENST00000358966 SARM1Q6SZW1 724 aa14.2□□□□□ -0.14
GGPS1-202ENST00000358966 WRNIP1Q96S55 665 aa14.2□□□□□ -0.14
GGPS1-202ENST00000358966 NCAPGQ9BPX3 1015 aa14.2□□□□□ -0.14
GGPS1-202ENST00000358966 H7C1D1 291 aa14.2□□□□□ -0.14
GGPS1-202ENST00000358966 CTIFO43310 598 aaKnown RBP14.2□□□□□ -0.14
GGPS1-202ENST00000358966 MARCH6O60337 910 aa14.2□□□□□ -0.14
GGPS1-202ENST00000358966 PRPHP41219 470 aa14.2□□□□□ -0.14
GGPS1-202ENST00000358966 ARHGAP4P98171 946 aa14.2□□□□□ -0.14
GGPS1-202ENST00000358966 FANCCQ00597 558 aa14.2□□□□□ -0.14
GGPS1-202ENST00000358966 SPP2Q13103 211 aa14.2□□□□□ -0.14
GGPS1-202ENST00000358966 BTNL9Q6UXG8 535 aa14.2□□□□□ -0.14
GGPS1-202ENST00000358966 EGFL6Q8IUX8 553 aa14.2□□□□□ -0.14
GGPS1-202ENST00000358966 IGSF22Q8N9C0 903 aa14.2□□□□□ -0.14
GGPS1-202ENST00000358966 LRWD1Q9UFC0 647 aa14.2□□□□□ -0.14
GGPS1-202ENST00000358966 CTNND2Q9UQB3 1225 aa14.2□□□□□ -0.14
GGPS1-202ENST00000358966 LMNB1P20700 586 aa14.19□□□□□ -0.14
GGPS1-202ENST00000358966 MAP3K10Q02779 954 aa14.19□□□□□ -0.14
GGPS1-202ENST00000358966 CACTINQ8WUQ7 758 aaKnown RBP14.19□□□□□ -0.14
GGPS1-202ENST00000358966 TANGO6Q9C0B7 1094 aa14.19□□□□□ -0.14
GGPS1-202ENST00000358966 RNF181Q9P0P0 153 aa14.19□□□□□ -0.14
GGPS1-202ENST00000358966 LAD1O00515 517 aa14.19□□□□□ -0.14
GGPS1-202ENST00000358966 NCBP1Q09161 790 aaKnown RBP14.19□□□□□ -0.14
GGPS1-202ENST00000358966 GRB10Q13322 594 aa14.19□□□□□ -0.14
GGPS1-202ENST00000358966 SYT17Q9BSW7 474 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms