RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 POTEDQ86YR6 584 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 GLT8D2Q9H1C3 349 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 TMEM60Q9H2L4 133 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 MORC2Q9Y6X9 1032 aaPredicted RBP13.53□□□□□ -0.24
COL20A1-201ENST00000358894 SMIM23A6NLE4 172 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 EIF4A3P38919 411 aaKnown RBP13.53□□□□□ -0.24
COL20A1-201ENST00000358894 TRAF1Q13077 416 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 CFAP221Q4G0U5 840 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 TEX2Q8IWB9 1127 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 GJA10Q969M2 543 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 NDST4Q9H3R1 872 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 SH3GLB2Q9NR46 395 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 HDAC6Q9UBN7 1215 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 ARMCX3Q9UH62 379 aaPredicted RBP13.53□□□□□ -0.24
COL20A1-201ENST00000358894 FAN1Q9Y2M0 1017 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 MRFAP1Q9Y605 127 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 GOLGA6L10A0A0M3HER8 536 aa13.52□□□□□ -0.24
COL20A1-201ENST00000358894 HPDP32754 393 aaPredicted RBP13.52□□□□□ -0.24
COL20A1-201ENST00000358894 SEC23AQ15436 765 aa13.52□□□□□ -0.24
COL20A1-201ENST00000358894 MAN2A1Q16706 1144 aa13.52□□□□□ -0.24
COL20A1-201ENST00000358894 TXNRD3Q86VQ6 643 aa13.52□□□□□ -0.24
COL20A1-201ENST00000358894 LMBR1Q8WVP7 490 aa13.52□□□□□ -0.24
COL20A1-201ENST00000358894 GSTTP1A0A1W2PQM5 241 aa13.52□□□□□ -0.25
COL20A1-201ENST00000358894 MYL1P05976 194 aa13.52□□□□□ -0.25
COL20A1-201ENST00000358894 REXO1L1PQ8IX06 675 aa13.52□□□□□ -0.25
COL20A1-201ENST00000358894 CPXCR1Q8N123 301 aa13.52□□□□□ -0.25
COL20A1-201ENST00000358894 BICD1Q96G01 975 aa13.52□□□□□ -0.25
COL20A1-201ENST00000358894 RPGRIP1Q96KN7 1286 aa13.52□□□□□ -0.25
COL20A1-201ENST00000358894 FRMD4BQ9Y2L6 1034 aa13.52□□□□□ -0.25
COL20A1-201ENST00000358894 HYOU1Q9Y4L1 999 aa13.52□□□□□ -0.25
COL20A1-201ENST00000358894 KDM3AQ9Y4C1 1321 aa13.52□□□□□ -0.25
COL20A1-201ENST00000358894 TLDC2A0PJX2 215 aa13.52□□□□□ -0.25
COL20A1-201ENST00000358894 GDF11O95390 407 aa13.52□□□□□ -0.25
COL20A1-201ENST00000358894 MOCS3O95396 460 aa13.52□□□□□ -0.25
COL20A1-201ENST00000358894 XRCC5P13010 732 aaKnown RBP13.52□□□□□ -0.25
COL20A1-201ENST00000358894 GUCY2FP51841 1108 aa13.52□□□□□ -0.25
COL20A1-201ENST00000358894 SNAP25P60880 206 aa13.52□□□□□ -0.25
COL20A1-201ENST00000358894 FKBP3Q00688 224 aaKnown RBP13.52□□□□□ -0.25
COL20A1-201ENST00000358894 C2orf54Q08AI8 447 aa13.52□□□□□ -0.25
COL20A1-201ENST00000358894 VWA3BQ502W6 1294 aa13.52□□□□□ -0.25
COL20A1-201ENST00000358894 FBXO33Q7Z6M2 555 aa13.52□□□□□ -0.25
COL20A1-201ENST00000358894 POLD4Q9HCU8 107 aa13.52□□□□□ -0.25
COL20A1-201ENST00000358894 PCDHA6Q9UN73 950 aa13.52□□□□□ -0.25
COL20A1-201ENST00000358894 PCDHA8Q9Y5H6 950 aa13.52□□□□□ -0.25
COL20A1-201ENST00000358894 FOXP2O15409 715 aa13.51□□□□□ -0.25
COL20A1-201ENST00000358894 BBOX1O75936 387 aa13.51□□□□□ -0.25
COL20A1-201ENST00000358894 TDP2O95551 362 aa13.51□□□□□ -0.25
COL20A1-201ENST00000358894 HMGB2P26583 209 aaKnown RBP13.51□□□□□ -0.25
COL20A1-201ENST00000358894 HDAC9Q9UKV0 1011 aa13.51□□□□□ -0.25
COL20A1-201ENST00000358894 SPATA31A1Q5TZJ5 1347 aa13.51□□□□□ -0.25
COL20A1-201ENST00000358894 CALUO43852 315 aaPredicted RBP13.51□□□□□ -0.25
COL20A1-201ENST00000358894 EHHADHQ08426 723 aa13.51□□□□□ -0.25
COL20A1-201ENST00000358894 RPS6KA1Q15418 735 aa13.51□□□□□ -0.25
COL20A1-201ENST00000358894 RETREG2Q8NC44 543 aa13.51□□□□□ -0.25
COL20A1-201ENST00000358894 LRRN4CLQ8ND94 238 aa13.51□□□□□ -0.25
COL20A1-201ENST00000358894 KIFC2Q96AC6 838 aa13.51□□□□□ -0.25
COL20A1-201ENST00000358894 RIC1Q4ADV7 1423 aa13.51□□□□□ -0.25
COL20A1-201ENST00000358894 NDUFAB1O14561 156 aa13.51□□□□□ -0.25
COL20A1-201ENST00000358894 PPEF1O14829 653 aaPredicted RBP13.51□□□□□ -0.25
COL20A1-201ENST00000358894 GYPCP04921 128 aa13.51□□□□□ -0.25
COL20A1-201ENST00000358894 INPP5BP32019 993 aa13.51□□□□□ -0.25
COL20A1-201ENST00000358894 UBXN2AP68543 259 aa13.51□□□□□ -0.25
COL20A1-201ENST00000358894 ARHGAP44Q17R89 818 aa13.51□□□□□ -0.25
COL20A1-201ENST00000358894 GPATCH4Q5T3I0 446 aaKnown RBP13.51□□□□□ -0.25
COL20A1-201ENST00000358894 DDX12PQ92771 950 aa13.51□□□□□ -0.25
COL20A1-201ENST00000358894 TRIM10Q9UDY6 481 aa13.51□□□□□ -0.25
COL20A1-201ENST00000358894 STK17AQ9UEE5 414 aa13.51□□□□□ -0.25
COL20A1-201ENST00000358894 TRIM37O94972 964 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 NR2F2P24468 414 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 FBXO11Q86XK2 927 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 UBLCP1Q8WVY7 318 aaPredicted RBP13.5□□□□□ -0.25
COL20A1-201ENST00000358894 CCDC114Q96M63 670 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 XRN1Q8IZH2 1706 aaKnown RBP13.5□□□□□ -0.25
COL20A1-201ENST00000358894 ARHGEF35A5YM69 484 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 USP17L15C9J2P7 530 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 USP17L13C9JLJ4 530 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 USP17L11C9JVI0 530 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 USP17L18D6R9N7 530 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 USP17L22D6RA61 530 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 USP17L17D6RBQ6 530 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 USP17L19D6RCP7 530 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 USP17L20D6RJB6 530 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 KCNK3O14649 394 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 TCP1P17987 556 aaKnown RBP13.5□□□□□ -0.25
COL20A1-201ENST00000358894 ABCB4P21439 1286 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 CYP2J2P51589 502 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 USP17L24Q0WX57 530 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 CASP8Q14790 479 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 PKN1Q16512 942 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 USP17L6PQ6QN14 398 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 IFT20Q8IY31 132 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 GOLGA5Q8TBA6 731 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 HOMER2Q9NSB8 354 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 ANAPC4Q9UJX5 808 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 JCADQ9P266 1359 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 ATP8B1O43520 1251 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 EXOC3O60645 756 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 DCCP43146 1447 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 KIF11P52732 1056 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 GPSM2P81274 684 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms